RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 OSR1Q8TAX0 266 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 SNHG12Q9BXW3 62 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 SLC45A2Q9UMX9 530 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 SRRM4A7MD48 611 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 G3V318 75 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 CTRLP40313 264 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 OR11H1Q8NG94 326 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 A6NDX4 124 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 F2Z2F3 143 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 GNG7O60262 68 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 Q0VG73 95 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 TDRG1Q3Y452 100 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 MIC13Q5XKP0 118 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 FAM167A-AS1Q96KT0 104 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 TMEM140Q9NV12 185 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 NIPBLQ6KC79 2804 aaeCLIP5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 TMEM89A2RUT3 159 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 PPP5D1E7EU14 171 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 REG1AP05451 166 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 MYOD1P15172 320 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 MYCNOSP40205 109 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 CD69Q07108 199 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 OR1N2Q8NGR9 330 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 ZNF747Q9BV97 191 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 S4R3C0 116 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 CCL24O00175 119 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 ATP6V0E1O15342 81 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 CXorf1O96002 111 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 ELANEP08246 267 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 GCHFRP30047 84 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 NUTF2P61970 127 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 DYNAPQ8N1N2 210 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 SRSF12Q8WXF0 261 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 CFHR4Q92496 578 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 A0A1W2PPQ1 181 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 C17orf112F2Z3M2 114 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 NDUFA7O95182 113 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 TFPI2P48307 235 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 RPP30P78346 268 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 FAM78BQ5VT40 261 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 OR4A47Q6IF82 309 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 C9orf139Q6ZV77 190 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 WFDC3Q8IUB2 231 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 IL36BQ9NZH7 164 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 FBXL7Q9UJT9 491 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 PRNDQ9UKY0 176 aa5.8□□□□□ -1.48
CDC42BPA-208ENST00000442054 IGLV1-47P01700 117 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 IGHV3-23P01764 117 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 PAFAH1B2P68402 229 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 PSG5Q15238 335 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 DEFB136Q30KP8 78 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 LINC00311Q8N616 119 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 STPG3Q8N7X2 389 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 TMEM37Q8WXS4 190 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 AURKAIP1Q9NWT8 199 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 PEMTQ9UBM1 199 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 ZNF257Q9Y2Q1 563 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 HRNRQ86YZ3 2850 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 GGTLC3B5MD39 225 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 PRB2P02812 416 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 OR5G3P0C626 314 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 CT45A6P0DMU7 189 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 CT45A5P0DMU8 189 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 CT45A7P0DMV0 189 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 RHOGP84095 191 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 EEF1AKMT3Q96AZ1 226 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 IGKV1D-37A0A075B6S9 117 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 SMIM27A0A1W2PRY6 76 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 E7EUB6 86 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 RPLP1P05386 114 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 PAX2Q02962 417 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 MORN5Q5VZ52 161 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 ZNF833PQ6ZTB9 187 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 MRPL52Q86TS9 123 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 GTSCR1Q86UQ5 136 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 NDUFA11Q86Y39 141 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 RNF5Q99942 180 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 C20orf144Q9BQM9 153 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 NPVFQ9HCQ7 196 aa5.79□□□□□ -1.48
CDC42BPA-208ENST00000442054 H0YJW9 148 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 CNTFRP26992 372 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 ERVFC1-1P60608 527 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 DMRTA1Q5VZB9 504 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 TMEM136Q6ZRR5 245 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 SLC35E1Q96K37 410 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 RABAC1Q9UI14 185 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 OVOL1O14753 267 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 PRCDQ00LT1 54 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 CLEC19AQ6UXS0 136 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 OR51B2Q9Y5P1 312 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 NSD1Q96L73 2696 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 IGLV2-23P01705 113 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 IGKV1-16P04430 117 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 SAA1P0DJI8 122 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 UBE2G2P60604 165 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 C2orf83Q53S99 150 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 MIR17HGQ75NE6 70 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 SLC25A2Q9BXI2 301 aa5.78□□□□□ -1.48
CDC42BPA-208ENST00000442054 SORL1Q92673 2214 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 A0A1W2PPI3 338 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms