RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 SFT2D1Q8WV19 159 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 CHCHD5Q9BSY4 110 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 NKX6-2Q9C056 277 aaPredicted RBP4.8□□□□□ -1.64
SPEN-202ENST00000438066 NDUFA4L2Q9NRX3 87 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 PEF1Q9UBV8 284 aaKnown RBP4.8□□□□□ -1.64
SPEN-202ENST00000438066 AMMECR1Q9Y4X0 333 aaPredicted RBP4.8□□□□□ -1.64
SPEN-202ENST00000438066 ANKRD17O75179 2603 aaKnown RBP4.79□□□□□ -1.64
SPEN-202ENST00000438066 IGHV3-16A0A0C4DH30 117 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 RBFOX3A6NFN3 312 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 SOX15O60248 233 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 IGHV2-5P01817 119 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 RNASE2P10153 161 aaKnown RBP4.79□□□□□ -1.64
SPEN-202ENST00000438066 COX7A1P24310 79 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 LGALS7P47929 136 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 RAB11AP62491 216 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 PAX2Q02962 417 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 BTN1A1Q13410 526 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 C2orf83Q53S99 150 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 ZNF506Q5JVG8 444 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 PNKDQ8N490 385 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 Q8N9P0 234 aaPredicted RBP4.79□□□□□ -1.64
SPEN-202ENST00000438066 OR1L8Q8NGR8 309 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 MGST2Q99735 147 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 RARRES2Q99969 163 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 GGTLC1Q9BX51 225 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 EIF5A2Q9GZV4 153 aaKnown RBP4.79□□□□□ -1.64
SPEN-202ENST00000438066 SLC35B3Q9H1N7 401 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 ZNF430Q9H8G1 570 aaPredicted RBP4.79□□□□□ -1.64
SPEN-202ENST00000438066 JPT2Q9H910 190 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 ENY2Q9NPA8 101 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 KPTNQ9Y664 436 aa4.79□□□□□ -1.64
SPEN-202ENST00000438066 USP9YO00507 2555 aaPredicted RBP4.79□□□□□ -1.64
SPEN-202ENST00000438066 KMT2BQ9UMN6 2715 aaPredicted RBP4.78□□□□□ -1.64
SPEN-202ENST00000438066 IGHV3-72A0A0B4J1Y9 119 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 CTXND1A0A1B0GTU2 59 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 MAP1LC3B2A6NCE7 125 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 SEC14L6B5MCN3 397 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 E7EUB6 86 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 C17orf112F2Z3M2 114 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 DNASE2O00115 360 aaPredicted RBP4.78□□□□□ -1.64
SPEN-202ENST00000438066 SNAPINO95295 136 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 MBP02144 154 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 HSPB1P04792 205 aaKnown RBP4.78□□□□□ -1.64
SPEN-202ENST00000438066 IFNA4P05014 189 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 CT45A10P0DMU9 189 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 PRTN3P24158 256 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 BMI1P35226 326 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 OPRK1P41145 380 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 VMA21Q3ZAQ7 101 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 C10orf55Q5SWW7 151 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 ZNF709Q8N972 641 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 OR10W1Q8NGF6 305 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 SUN5Q8TC36 379 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 HINT2Q9BX68 163 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 COMMD5Q9GZQ3 224 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 MAP1LC3BQ9GZQ8 125 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 FBN2P35556 2912 aa4.78□□□□□ -1.64
SPEN-202ENST00000438066 ENSAO43768 121 aaKnown RBP4.77□□□□□ -1.65
SPEN-202ENST00000438066 YIF1AO95070 293 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 PRB1P04280 392 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 SRP19P09132 144 aaKnown RBP4.77□□□□□ -1.65
SPEN-202ENST00000438066 BCL2P10415 239 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 CNTFRP26992 372 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 FGF8P55075 233 aaPredicted RBP4.77□□□□□ -1.65
SPEN-202ENST00000438066 LMO4P61968 165 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 ARF6P62330 175 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 WT1-ASQ06250 92 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 PTPN13Q12923 2485 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 KLRD1Q13241 179 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 PRSS8Q16651 343 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 KHDC3LQ587J8 217 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 TPTE2P1Q5T6R2 138 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 LCN15Q6UWW0 184 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 OR10G4Q8NGN3 311 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 OR10G9Q8NGN4 311 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 RPEQ96AT9 228 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 SLC25A22Q9H936 323 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 NPVFQ9HCQ7 196 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 SIRT7Q9NRC8 400 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 KCNIP2Q9NS61 270 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 SIGLEC9Q9Y336 463 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 INSIG2Q9Y5U4 225 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 POLQO75417 2590 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 IGKV1OR2-108A0A075B7D4 117 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 IGLC7A0M8Q6 106 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 VENTXO95231 258 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 DEFA4P12838 97 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 HTR1DP28221 377 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 MAS1LP35410 378 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 CEACAM3P40198 252 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 PSG5Q15238 335 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 TMEM249Q2WGJ8 235 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 ACOT6Q3I5F7 207 aaPredicted RBP4.77□□□□□ -1.65
SPEN-202ENST00000438066 GCSAMLQ5JQS6 135 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 LEMD1Q68G75 181 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 CYB561D1Q8N8Q1 229 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.77□□□□□ -1.65
SPEN-202ENST00000438066 RNF5Q99942 180 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms