RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 PLP1P60201 277 aa8.63□□□□□ -1.03
ATP2C1-204ENST00000428331 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
ATP2C1-204ENST00000428331 MRPL36Q9P0J6 103 aaKnown RBP8.63□□□□□ -1.03
ATP2C1-204ENST00000428331 NAV3Q8IVL0 2385 aa8.63□□□□□ -1.03
ATP2C1-204ENST00000428331 C3orf36Q3SXR2 165 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 ZNF318Q5VUA4 2279 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 CACNA1GO43497 2377 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 GNG7O60262 68 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 HBDP02042 147 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 CACNG7P62955 275 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 SPATA12Q7Z6I5 190 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 NEU4Q8WWR8 484 aaPredicted RBP8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 TP73-AS1Q9UF72 201 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 HILPDAQ9Y5L2 63 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 C22orf46C9J442 243 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 PLXNB1O43157 2135 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 GP9P14770 177 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 FCGR2BP31994 310 aaPredicted RBP8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 PSMG4Q5JS54 123 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 PPP1R27Q86WC6 154 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 URB1-AS1Q96HZ7 61 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 GVINP1Q7Z2Y8 2422 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 TRAV8-6A0A0B4J262 113 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 C16orf97H3BN30 126 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 LINC00311Q8N616 119 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 JKAMPQ9P055 326 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 F11RQ9Y624 299 aaKnown RBP8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 SPCS1Q9Y6A9 102 aa8.62□□□□□ -1.03
ATP2C1-204ENST00000428331 H3BRM9 83 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 COX7A1P24310 79 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 C7orf69Q9H7B7 122 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 OR5A1Q8NGJ0 315 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 IFI27L1Q96BM0 104 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 DKK4Q9UBT3 224 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 PRUNE2Q8WUY3 3088 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 A0A0G2JLM5 398 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 D6R8Y8 96 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 IL4P05112 153 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 IFI27P40305 119 aaPredicted RBP8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 TWIST1Q15672 202 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 FBXL15Q9H469 300 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 TPSG1Q9NRR2 321 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 TMEM14CQ9P0S9 112 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 WNK2Q9Y3S1 2297 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 C9orf118A6NHY6 69 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 PRRG2O14669 202 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 GCSHP23434 173 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 BMI1P35226 326 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 DIAPH2-AS1Q14236 149 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 FER1L6-AS1Q8NA97 138 aa8.61□□□□□ -1.03
ATP2C1-204ENST00000428331 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 TMEM133Q9H2Q1 129 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 SPEGQ15772 3267 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 EP300Q09472 2414 aaPredicted RBP8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 DSCAMO60469 2012 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 HES1Q14469 280 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 FAM120AOSQ5T036 256 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 SIGLEC9Q9Y336 463 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 SMAD7O15105 426 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 RIPPLY3P57055 190 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 KIR3DS1Q14943 382 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 MAP1LC3AQ9H492 121 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 CRYGCP07315 174 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 IGLC1P0CG04 106 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 PSG3Q16557 428 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 LGALS9BQ3B8N2 356 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 LGALS9CQ6DKI2 356 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 DPF1Q92782 380 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 RABAC1Q9UI14 185 aa8.6□□□□□ -1.03
ATP2C1-204ENST00000428331 FBLL1A6NHQ2 334 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 PVRIGQ6DKI7 326 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 TMEM75Q8N9X5 138 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 CITED1Q99966 193 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 TMEM178BH3BS89 294 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 ORM1P02763 201 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 ZC2HC1AQ96GY0 325 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 NAA38Q9BRA0 125 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 PRRC2CQ9Y520 2896 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 IGHV1-8P0DP01 117 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 LYZL1Q6UWQ5 148 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 TNFRSF14Q92956 283 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 RNF125Q96EQ8 232 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 CSTL1Q9H114 145 aa8.59□□□□□ -1.03
ATP2C1-204ENST00000428331 PCNX1Q96RV3 2341 aa8.59□□□□□ -1.04
ATP2C1-204ENST00000428331 C8orf31Q8N9H6 132 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 RAB1BQ9H0U4 201 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 TRBV19A0A075B6N1 114 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 NPIPB6E9PJ23 425 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 PAX2Q02962 417 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 RBPJQ06330 500 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 NUP37Q8NFH4 326 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 CDX4O14627 284 aaPredicted RBP8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 IGLV2-23P01705 113 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 SHANK2-AS3Q9BTD1 123 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 SELENOKQ9Y6D0 94 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 USP34Q70CQ2 3546 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 FCER1GP30273 86 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 FAM104BQ5XKR9 115 aa8.58□□□□□ -1.04
ATP2C1-204ENST00000428331 AMN1Q8IY45 258 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms