RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 CDKN1BP46527 198 aa8.11□□□□□ -1.11
CLTCL1-202ENST00000427926 ATP6V0BQ99437 205 aa8.11□□□□□ -1.11
CLTCL1-202ENST00000427926 RSPO3Q9BXY4 272 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-202ENST00000427926 TRAV2A0A0B4J234 112 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 IGKV1-9A0A0C4DH69 117 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 A0A1B0GUS0 222 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 CLPSP04118 112 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 CARHSP1Q9Y2V2 147 aaKnown RBP8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 HEATR5BQ9P2D3 2071 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 ZSWIM8A7E2V4 1837 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 RLFQ13129 1914 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 TMEM95Q3KNT9 176 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 NKAPP1Q8N9T2 125 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 GATD1Q8NB37 220 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 RTBDNQ9BSG5 229 aaPredicted RBP8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 ANAPC10Q9UM13 185 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 TRAV13-1A0A0B4J241 112 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 PIP4P1Q86T03 277 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 DKK4Q9UBT3 224 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 ALPK2Q86TB3 2170 aa8.1□□□□□ -1.11
CLTCL1-202ENST00000427926 IGFBP3P17936 291 aaPredicted RBP8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 TCTEX1D4Q5JR98 221 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 OR2K2Q8NGT1 345 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 KLF2Q9Y5W3 355 aaPredicted RBP8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 ESDP10768 282 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 PAX9P55771 341 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 RASL11AQ6T310 242 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 COQ2Q96H96 371 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 RFNGQ9Y644 331 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 C22orf46C9J442 243 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 GAS1P54826 345 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 SSBP2P81877 361 aaPredicted RBP8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 VWC2Q2TAL6 325 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 TMEM190Q8WZ59 177 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 TRGV9Q99603 122 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 IGKV1D-17A0A075B6S4 117 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 J3QRE1 110 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 TOMM40O96008 361 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 SUPT4H1P63272 117 aaKnown RBP8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 HGFACQ04756 655 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 ZFAND6Q6FIF0 208 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 C14orf144Q96I85 54 aa8.09□□□□□ -1.11
CLTCL1-202ENST00000427926 GAGE12BA1L429 117 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 GAGE12JA6NER3 117 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 GAGE7O76087 117 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 GAGE12FP0CL80 117 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 GAGE12GP0CL81 117 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 GAGE12IP0CL82 117 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 GAGE4Q13068 117 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 GAGE5Q13069 117 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 GAGE13Q4V321 117 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 ZNF319Q9P2F9 582 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 TRAV5A0A0B4J249 113 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 LYPD3O95274 346 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 CCL20P78556 96 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 CD300EQ496F6 205 aaPredicted RBP8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 EXOC3-AS1Q8N2X6 119 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 RNASE7Q9H1E1 156 aaKnown RBP8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 B3GALT5-AS1P59052 145 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 UBE2V1Q13404 147 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 PMVKQ15126 192 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 LSM4Q9Y4Z0 139 aaKnown RBP8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 CD55P08174 381 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 EFNB3Q15768 340 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 DEFB104AQ8WTQ1 72 aa8.08□□□□□ -1.12
CLTCL1-202ENST00000427926 FBLN5Q9UBX5 448 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 ZNF562Q6V9R5 426 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 SLC25A2Q9BXI2 301 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 IGHV4-39P01824 125 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 ELANEP08246 267 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 AZU1P20160 251 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 C18orf12Q96KH6 178 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 MYO7BQ6PIF6 2116 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 SDK2Q58EX2 2172 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 TRBV25-1A0A075B6N4 114 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 PSG3Q16557 428 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 VPREB3Q9UKI3 123 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 IGKV1-12A0A0C4DH73 117 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 SNAI2O43623 268 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 DPM2O94777 84 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 IGKV1D-12P01611 117 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 IGFL4Q6B9Z1 124 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 IMMP2LQ96T52 175 aa8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 SRSF8Q9BRL6 282 aaKnown RBP8.07□□□□□ -1.12
CLTCL1-202ENST00000427926 DOCK4Q8N1I0 1966 aa8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 VCYO14598 125 aa8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 SPINK13Q1W4C9 94 aa8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 SSBP4Q9BWG4 385 aaPredicted RBP8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 DIDO1Q9BTC0 2240 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 TMEM238C9JI98 176 aa8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 RHODO00212 210 aa8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 DMRTC2Q8IXT2 367 aaPredicted RBP8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 Q8TAT8 98 aa8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 MS4A6AQ9H2W1 248 aa8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 A0A087WWL8 130 aa8.06□□□□□ -1.12
CLTCL1-202ENST00000427926 TMEM256Q8N2U0 113 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms