RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PF4V1P10720 104 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 RPL35P42766 123 aaKnown RBP11.74□□□□□ -0.53
ACTB-204ENST00000425660 RANP62826 216 aaKnown RBP11.74□□□□□ -0.53
ACTB-204ENST00000425660 BLNKQ8WV28 456 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 PRELID1Q9Y255 219 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 TRBV19A0A075B6N1 114 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 CLPSL1A2RUU4 121 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 ADIRFQ15847 76 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 C15orf54Q8N8G6 183 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 OR4F17Q8NGA8 305 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 HIST1H2BAQ96A08 127 aa11.74□□□□□ -0.53
ACTB-204ENST00000425660 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
ACTB-204ENST00000425660 COLCA2A8K830 154 aa11.73□□□□□ -0.53
ACTB-204ENST00000425660 SNRPCP09234 159 aaKnown RBP11.73□□□□□ -0.53
ACTB-204ENST00000425660 SRP14P37108 136 aaKnown RBP11.73□□□□□ -0.53
ACTB-204ENST00000425660 CTDSP1Q9GZU7 261 aa11.73□□□□□ -0.53
ACTB-204ENST00000425660 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
ACTB-204ENST00000425660 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
ACTB-204ENST00000425660 HELTA6NFD8 242 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 PPP5D1E7EU14 171 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
ACTB-204ENST00000425660 PDE6HQ13956 83 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 RNF212Q495C1 297 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 LYPD1Q8N2G4 141 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 YPEL4Q96NS1 127 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 CDC42EP3Q9UKI2 254 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 ANK3Q12955 4377 aaKnown RBP11.72□□□□□ -0.53
ACTB-204ENST00000425660 BUB3O43684 328 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 CD99P14209 185 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 ARL3P36405 182 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 FAM209BQ5JX69 171 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 C5orf17Q8NAS9 161 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 ISOC2Q96AB3 205 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 Q9H3A6 140 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 OTORQ9NRC9 128 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 YAE1D1Q9NRH1 226 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 EPDR1Q9UM22 224 aa11.72□□□□□ -0.53
ACTB-204ENST00000425660 SONP18583 2426 aaKnown RBP11.71□□□□□ -0.53
ACTB-204ENST00000425660 PGPA6NDG6 321 aa11.71□□□□□ -0.54
ACTB-204ENST00000425660 PEX7O00628 323 aa11.71□□□□□ -0.54
ACTB-204ENST00000425660 MT-ND4LP03901 98 aa11.71□□□□□ -0.54
ACTB-204ENST00000425660 HNF1AP20823 631 aa11.71□□□□□ -0.54
ACTB-204ENST00000425660 PGPEP1LA6NFU8 196 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 CLDN34H7C241 214 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 NDUFA4O00483 81 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 TRBV12-3P01733 135 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 TAS2R60P59551 318 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 C1orf194Q5T5A4 169 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 TEX38Q6PEX7 206 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 SIGLEC15Q6ZMC9 328 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 LCNL1Q6ZST4 164 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 RNF152Q8N8N0 203 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 OR4X2Q8NGF9 303 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 OCC1Q8TAD7 63 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 MYOZ3Q8TDC0 251 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 IGF2BP2-AS1Q96M15 143 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 TMA7Q9Y2S6 64 aaKnown RBP11.7□□□□□ -0.54
ACTB-204ENST00000425660 KLF12Q9Y4X4 402 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 U3KQE9 123 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 H3BTX0 84 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 ELANEP08246 267 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 GNG4P50150 75 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 SLC35B1P78383 322 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 FOXE3Q13461 319 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 CENPWQ5EE01 88 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 ANAPC16Q96DE5 110 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 C17orf77Q96MU5 243 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 ATG101Q9BSB4 218 aa11.7□□□□□ -0.54
ACTB-204ENST00000425660 IGHV3OR16-8A0A075B7F1 116 aa11.69□□□□□ -0.54
ACTB-204ENST00000425660 IGHV3-11P01762 117 aa11.69□□□□□ -0.54
ACTB-204ENST00000425660 SLC25A5P05141 298 aaKnown RBP11.69□□□□□ -0.54
ACTB-204ENST00000425660 CNN1P51911 297 aaKnown RBP11.69□□□□□ -0.54
ACTB-204ENST00000425660 C10orf99Q6UWK7 81 aa11.69□□□□□ -0.54
ACTB-204ENST00000425660 OR8I2Q8N0Y5 310 aa11.69□□□□□ -0.54
ACTB-204ENST00000425660 GPR82Q96P67 336 aa11.69□□□□□ -0.54
ACTB-204ENST00000425660 DUX5Q96PT3 197 aa11.69□□□□□ -0.54
ACTB-204ENST00000425660 METTL26Q96S19 204 aa11.69□□□□□ -0.54
ACTB-204ENST00000425660 SERTAD4Q9NUC0 356 aa11.69□□□□□ -0.54
ACTB-204ENST00000425660 DNAJC9-AS1A6NH13 148 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 K7EN84 100 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 ZNF253O75346 499 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 TCRAP04437 139 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 RPL15P61313 204 aaKnown RBP11.68□□□□□ -0.54
ACTB-204ENST00000425660 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 ELOBQ15370 118 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 TMEM183BQ1AE95 376 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 FAM24BQ8N5W8 94 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 LINC00479Q96M42 142 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 SMAD5-AS1Q9Y6J3 95 aa11.68□□□□□ -0.54
ACTB-204ENST00000425660 A0A087X0K7 114 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 SLC17A3O00476 420 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 GNG5P63218 68 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 SFRP2Q96HF1 295 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 AURKAIP1Q9NWT8 199 aaPredicted RBP11.67□□□□□ -0.54
ACTB-204ENST00000425660 CUBNO60494 3623 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 GGCTO75223 188 aaKnown RBP11.67□□□□□ -0.54
ACTB-204ENST00000425660 S100A9P06702 114 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms