RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PDPNQ86YL7 162 aa9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 RBMXL3Q8N7X1 1067 aaKnown RBP9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 GPR82Q96P67 336 aa9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 TEX50A0A1B0GTY4 177 aa9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 FAM90A9PA6NNJ1 464 aa9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 INO80CQ6PI98 192 aaPredicted RBP9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 RBPMS2Q6ZRY4 209 aaKnown RBP9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 ZADH2Q8N4Q0 377 aa9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 GEMIN7Q9H840 131 aaKnown RBP9.07□□□□□ -0.96
SEC61A1-202ENST00000424880 J3QR89 54 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 TIMM8AO60220 97 aaPredicted RBP9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 FCER1GP30273 86 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 NBL1P41271 181 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 LOXL3P58215 753 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 BOD1L2Q8IYS8 172 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 ZNF479Q96JC4 524 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 SPANXB1Q9NS25 103 aaPredicted RBP9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 TRGV8A0A0C4DH27 118 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 OR11H12B2RN74 326 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 SMIM13P0DJ93 91 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 FAM169BQ8N8A8 192 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 OR11H1Q8NG94 326 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 OR9G4Q8NGQ1 327 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 OR11H2Q8NH07 326 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 DEFB127Q9H1M4 99 aa9.06□□□□□ -0.96
SEC61A1-202ENST00000424880 D6R8Y8 96 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 IL11RAQ14626 422 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 CR1LQ2VPA4 569 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 HCP5Q6MZN7 132 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 PRSS33Q8NF86 280 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 SIGLEC8Q9NYZ4 499 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 BOKQ9UMX3 212 aaPredicted RBP9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 IGKV1D-17A0A075B6S4 117 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 C16orf97H3BN30 126 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 CSN1S1P47710 185 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 ANXA2RQ3ZCQ2 193 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 ARRDC1-AS1Q9H2J1 176 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 WNK2Q9Y3S1 2297 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 DSCAMO60469 2012 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 TMEM213A2RRL7 107 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 GOLT1AQ6ZVE7 132 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 OR4X2Q8NGF9 303 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 VGLL1Q99990 258 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 NDFIP1Q9BT67 221 aa9.05□□□□□ -0.96
SEC61A1-202ENST00000424880 KBTBD11-OT1A0A1B0GTJ5 212 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 RNASE2P10153 161 aaKnown RBP9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 FOLR3P41439 243 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 PLGLB1Q02325 96 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 CD69Q07108 199 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 FAM90A1Q86YD7 464 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 AMN1Q8IY45 258 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 SS18L2Q9UHA2 77 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 FOXA2Q9Y261 457 aaPredicted RBP9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 CACNA1BQ00975 2339 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 SAA1P0DJI8 122 aaPredicted RBP9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 PRB3Q04118 309 aaPredicted RBP9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 GCSAMQ8N6F7 178 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 DDB2Q92466 427 aa9.04□□□□□ -0.96
SEC61A1-202ENST00000424880 ASH1LQ9NR48 2969 aaKnown RBP9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 KLRC4-KLRK1H3BQV0 150 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 TMEM164Q5U3C3 297 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 GTSCR1Q86UQ5 136 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 COL27A1Q8IZC6 1860 aaPredicted RBP9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 IGKV3D-15A0A087WSY6 115 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 F8W1H4 67 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 SLC25A17O43808 307 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 MLST8Q9BVC4 326 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 GAS8-AS1O95177 125 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 PRCDQ00LT1 54 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 TCF15Q12870 199 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 C17orf77Q96MU5 243 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 PRSS22Q9GZN4 317 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 CALYQ9NYX4 217 aa9.03□□□□□ -0.96
SEC61A1-202ENST00000424880 ABHD17BQ5VST6 288 aa9.02□□□□□ -0.97
SEC61A1-202ENST00000424880 GLMPQ8WWB7 406 aa9.02□□□□□ -0.97
SEC61A1-202ENST00000424880 Q9H3A6 140 aa9.02□□□□□ -0.97
SEC61A1-202ENST00000424880 JPT1Q9UK76 154 aa9.02□□□□□ -0.97
SEC61A1-202ENST00000424880 SOX21Q9Y651 276 aaPredicted RBP9.02□□□□□ -0.97
SEC61A1-202ENST00000424880 NPIPB6E9PJ23 425 aa9.02□□□□□ -0.97
SEC61A1-202ENST00000424880 CYC1P08574 325 aa9.02□□□□□ -0.97
SEC61A1-202ENST00000424880 DIAPH2-AS1Q14236 149 aa9.02□□□□□ -0.97
SEC61A1-202ENST00000424880 C19orf71A6NCJ1 209 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 CRYGCP07315 174 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 WT1-ASQ06250 92 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 ZNF418Q8TF45 676 aaPredicted RBP9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 PRNDQ9UKY0 176 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 A0A1B0GUT8 65 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 LINC01548A6NM66 108 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 TCRAP04437 139 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 TTTY12Q9BZ98 90 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 CACNA1HO95180 2353 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 IGKV1D-37A0A075B6S9 117 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 MBNL2Q5VZF2 373 aaKnown RBP9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 CNEP1R1Q8N9A8 125 aa9.01□□□□□ -0.97
SEC61A1-202ENST00000424880 A0A1W2PNU3 283 aaPredicted RBP9□□□□□ -0.97
SEC61A1-202ENST00000424880 UPK2O00526 184 aa9□□□□□ -0.97
SEC61A1-202ENST00000424880 CT45A6P0DMU7 189 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms