RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CIARTQ8N365 385 aaPredicted RBP11.46□□□□□ -0.58
MSH5-206ENST00000423982 OR1L4Q8NGR5 311 aa11.46□□□□□ -0.58
MSH5-206ENST00000423982 GPR82Q96P67 336 aa11.46□□□□□ -0.58
MSH5-206ENST00000423982 IGHV3-72A0A0B4J1Y9 119 aa11.45□□□□□ -0.58
MSH5-206ENST00000423982 P01737 135 aa11.45□□□□□ -0.58
MSH5-206ENST00000423982 FLYWCH2Q96CP2 140 aaKnown RBP11.45□□□□□ -0.58
MSH5-206ENST00000423982 CRXO43186 299 aaPredicted RBP11.45□□□□□ -0.58
MSH5-206ENST00000423982 SLC25A17O43808 307 aa11.45□□□□□ -0.58
MSH5-206ENST00000423982 NBEAP1P0C6P0 100 aa11.45□□□□□ -0.58
MSH5-206ENST00000423982 TCTAP57738 103 aa11.45□□□□□ -0.58
MSH5-206ENST00000423982 TMEM108Q6UXF1 575 aa11.45□□□□□ -0.58
MSH5-206ENST00000423982 ATP5L2Q7Z4Y8 100 aa11.45□□□□□ -0.58
MSH5-206ENST00000423982 A0A1W2PPI3 338 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 APOA2P02652 100 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 GLRXP35754 106 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 DLX1P56177 255 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 SLC25A34Q6PIV7 304 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 OSR1Q8TAX0 266 aaPredicted RBP11.44□□□□□ -0.58
MSH5-206ENST00000423982 TMUB1Q9BVT8 246 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 PRSS22Q9GZN4 317 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 DOPEY1Q5JWR5 2465 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 KMT2BQ9UMN6 2715 aaPredicted RBP11.44□□□□□ -0.58
MSH5-206ENST00000423982 TRAV30A0A087WSZ9 112 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 ZNF843Q8N446 348 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 TEX45Q8NA69 505 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 C19orf71A6NCJ1 209 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 CHRDL1Q9BU40 450 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 RAB9BQ9NP90 201 aa11.44□□□□□ -0.58
MSH5-206ENST00000423982 A8MWL6 223 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 OR5AN1Q8NGI8 311 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 RNASE6Q93091 150 aaKnown RBP11.43□□□□□ -0.58
MSH5-206ENST00000423982 SCRT2Q9NQ03 307 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 KLF12Q9Y4X4 402 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.43□□□□□ -0.58
MSH5-206ENST00000423982 hADV38S2A0JD32 116 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 CHEK1O14757 476 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 S100A7P31151 101 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 ATP5IP56385 69 aaPredicted RBP11.43□□□□□ -0.58
MSH5-206ENST00000423982 EXOC3-AS1Q8N2X6 119 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 Q9H3A6 140 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 CST9LQ9H4G1 147 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
MSH5-206ENST00000423982 IGLV3-9A0A075B6K5 115 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 NCR2O95944 276 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 IGLV2-23P01705 113 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 TCRAP04437 139 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 THAP8Q8NA92 274 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 LINC00574Q9H8X3 128 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 UBR5O95071 2799 aaPredicted RBP11.42□□□□□ -0.58
MSH5-206ENST00000423982 VPS13CQ709C8 3753 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 TRAV8-6A0A0B4J262 113 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 LTAP01374 205 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 GATA4P43694 442 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 RHOGP84095 191 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 PSG9Q00887 426 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 COTL1Q14019 142 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 DEFB125Q8N687 156 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 OR10X1Q8NGY0 326 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 TMEM167AQ8TBQ9 72 aa11.42□□□□□ -0.58
MSH5-206ENST00000423982 ITLN2Q8WWU7 325 aaPredicted RBP11.42□□□□□ -0.58
MSH5-206ENST00000423982 H1FXQ92522 213 aaKnown RBP11.42□□□□□ -0.58
MSH5-206ENST00000423982 SPG11Q96JI7 2443 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 GP9P14770 177 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 TMEM200BQ69YZ2 307 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 RBPMS2Q6ZRY4 209 aaKnown RBP11.41□□□□□ -0.58
MSH5-206ENST00000423982 PRNTQ86SH4 94 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 CHCHD1Q96BP2 118 aaKnown RBP11.41□□□□□ -0.58
MSH5-206ENST00000423982 DAZAP1Q96EP5 407 aaKnown RBP11.41□□□□□ -0.58
MSH5-206ENST00000423982 PERPQ96FX8 193 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 TMEM191AQ9H0A3 160 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 ENSAO43768 121 aaKnown RBP11.41□□□□□ -0.58
MSH5-206ENST00000423982 FAM106CPP0CH98 169 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 CNTFRP26992 372 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 COL8A1P27658 744 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 MRGPRG-AS1Q2M3A8 158 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 FAM106AQ4KMX7 169 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 OR4C13Q8NGP0 309 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 VPS25Q9BRG1 176 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 LINC00312Q9Y6C7 94 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 TENM4Q6N022 2769 aa11.41□□□□□ -0.58
MSH5-206ENST00000423982 SVEP1Q4LDE5 3571 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 CELSR2Q9HCU4 2923 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 ZNF785A8K8V0 405 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 C19orf84I3L1E1 186 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 FAM169BQ8N8A8 192 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 MAP1LC3CQ9BXW4 147 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 HSBP1L1C9JCN9 74 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 OVOL3O00110 214 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 OCIAD2Q56VL3 154 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 GOLT1AQ6ZVE7 132 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 C5orf17Q8NAS9 161 aa11.4□□□□□ -0.58
MSH5-206ENST00000423982 APOHP02749 345 aaPredicted RBP11.39□□□□□ -0.59
MSH5-206ENST00000423982 ARMS2P0C7Q2 107 aa11.39□□□□□ -0.59
MSH5-206ENST00000423982 FXYD7P58549 80 aa11.39□□□□□ -0.59
MSH5-206ENST00000423982 LYPD2Q6UXB3 125 aa11.39□□□□□ -0.59
MSH5-206ENST00000423982 NAA38Q9BRA0 125 aaKnown RBP11.39□□□□□ -0.59
MSH5-206ENST00000423982 TPPP3Q9BW30 176 aa11.39□□□□□ -0.59
MSH5-206ENST00000423982 LIPFP07098 398 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms