RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 FAM106AQ4KMX7 169 aa16.96■□□□□ 0.31
USP48-205ENST00000421625 ZNF474Q6S9Z5 364 aaPredicted RBP16.96■□□□□ 0.31
USP48-205ENST00000421625 TRGV9Q99603 122 aa16.96■□□□□ 0.31
USP48-205ENST00000421625 K7ERU9 68 aa16.96■□□□□ 0.3
USP48-205ENST00000421625 TCTAP57738 103 aa16.96■□□□□ 0.3
USP48-205ENST00000421625 TMEM97Q5BJF2 176 aa16.96■□□□□ 0.3
USP48-205ENST00000421625 CCL8P80075 99 aa16.95■□□□□ 0.3
USP48-205ENST00000421625 SRSF12Q8WXF0 261 aaKnown RBP16.95■□□□□ 0.3
USP48-205ENST00000421625 MEGF9Q9H1U4 602 aa16.95■□□□□ 0.3
USP48-205ENST00000421625 IGHV3-72A0A0B4J1Y9 119 aa16.95■□□□□ 0.3
USP48-205ENST00000421625 TMEM200BQ69YZ2 307 aa16.95■□□□□ 0.3
USP48-205ENST00000421625 RP1L1Q8IWN7 2480 aaPredicted RBP16.95■□□□□ 0.3
USP48-205ENST00000421625 A0A1B0GUT8 65 aa16.94■□□□□ 0.3
USP48-205ENST00000421625 TIMM23BQ5SRD1 257 aa16.94■□□□□ 0.3
USP48-205ENST00000421625 GAGE10A6NGK3 116 aa16.94■□□□□ 0.3
USP48-205ENST00000421625 TEX36Q5VZQ5 186 aa16.94■□□□□ 0.3
USP48-205ENST00000421625 JMJD8Q96S16 334 aa16.94■□□□□ 0.3
USP48-205ENST00000421625 NAA38Q9BRA0 125 aaKnown RBP16.94■□□□□ 0.3
USP48-205ENST00000421625 FGF6P10767 208 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 LOXL1Q08397 574 aaPredicted RBP16.93■□□□□ 0.3
USP48-205ENST00000421625 C16orf54Q6UWD8 224 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 C22orf34Q6ZV56 151 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 PIP4P2Q8N4L2 257 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 C8orf46Q8TAG6 207 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 DMXL2Q8TDJ6 3036 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 FA2HQ7L5A8 372 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 RPRMLQ8N4K4 120 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 PRSS3P2Q8NHM4 247 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 OTORQ9NRC9 128 aa16.93■□□□□ 0.3
USP48-205ENST00000421625 LYZP61626 148 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 OR8A1Q8NGG7 326 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 ENSAO43768 121 aaKnown RBP16.92■□□□□ 0.3
USP48-205ENST00000421625 RIPPLY3P57055 190 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 TCF15Q12870 199 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 VMA21Q3ZAQ7 101 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 TMEM116Q8NCL8 245 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 TPPP3Q9BW30 176 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 RABAC1Q9UI14 185 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 SEC11AP67812 179 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 OR10AG1Q8NH19 301 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 HIGD1AQ9Y241 93 aa16.92■□□□□ 0.3
USP48-205ENST00000421625 A0A096LNJ9 63 aa16.91■□□□□ 0.3
USP48-205ENST00000421625 IFI27P40305 119 aaPredicted RBP16.91■□□□□ 0.3
USP48-205ENST00000421625 ZADH2Q8N4Q0 377 aa16.91■□□□□ 0.3
USP48-205ENST00000421625 TMEM238C9JI98 176 aa16.91■□□□□ 0.3
USP48-205ENST00000421625 CSN1S1P47710 185 aa16.91■□□□□ 0.3
USP48-205ENST00000421625 UFSP1Q6NVU6 142 aa16.91■□□□□ 0.3
USP48-205ENST00000421625 HILPDAQ9Y5L2 63 aa16.91■□□□□ 0.3
USP48-205ENST00000421625 LOC389332A0A1B0GUA5 103 aa16.9■□□□□ 0.3
USP48-205ENST00000421625 TNFRSF1AP19438 455 aa16.9■□□□□ 0.3
USP48-205ENST00000421625 CNTFRP26992 372 aa16.9■□□□□ 0.3
USP48-205ENST00000421625 MEF2CQ06413 473 aaPredicted RBP16.9■□□□□ 0.3
USP48-205ENST00000421625 RIGQ13278 110 aa16.9■□□□□ 0.3
USP48-205ENST00000421625 C1orf185Q5T7R7 199 aa16.9■□□□□ 0.3
USP48-205ENST00000421625 FXYD7P58549 80 aa16.89■□□□□ 0.29
USP48-205ENST00000421625 FER1L6-AS1Q8NA97 138 aa16.89■□□□□ 0.29
USP48-205ENST00000421625 TMEM186Q96B77 213 aa16.89■□□□□ 0.29
USP48-205ENST00000421625 ATMQ13315 3056 aa16.89■□□□□ 0.29
USP48-205ENST00000421625 ROS1P08922 2347 aa16.89■□□□□ 0.29
USP48-205ENST00000421625 C17orf77Q96MU5 243 aa16.89■□□□□ 0.29
USP48-205ENST00000421625 SLC25A39Q9BZJ4 359 aaPredicted RBP16.89■□□□□ 0.29
USP48-205ENST00000421625 H3BUT2 72 aa16.88■□□□□ 0.29
USP48-205ENST00000421625 HOXB4P17483 251 aaPredicted RBP16.88■□□□□ 0.29
USP48-205ENST00000421625 PLP1P60201 277 aa16.88■□□□□ 0.29
USP48-205ENST00000421625 WFDC8Q8IUA0 241 aa16.88■□□□□ 0.29
USP48-205ENST00000421625 TRAV17A0A0B4J275 112 aa16.88■□□□□ 0.29
USP48-205ENST00000421625 MBD3L4A6NDZ8 208 aaPredicted RBP16.88■□□□□ 0.29
USP48-205ENST00000421625 MBD3L3A6NE82 208 aaPredicted RBP16.88■□□□□ 0.29
USP48-205ENST00000421625 MBD3L5A6NJ08 208 aaPredicted RBP16.88■□□□□ 0.29
USP48-205ENST00000421625 PVRIGQ6DKI7 326 aa16.88■□□□□ 0.29
USP48-205ENST00000421625 MBD3L2Q8NHZ7 208 aaPredicted RBP16.88■□□□□ 0.29
USP48-205ENST00000421625 CEP295Q9C0D2 2601 aa16.88■□□□□ 0.29
USP48-205ENST00000421625 C9orf118A6NHY6 69 aa16.88■□□□□ 0.29
USP48-205ENST00000421625 S100A7AQ86SG5 101 aa16.88■□□□□ 0.29
USP48-205ENST00000421625 PRSS33Q8NF86 280 aa16.88■□□□□ 0.29
USP48-205ENST00000421625 KALRNO60229 2985 aa16.87■□□□□ 0.29
USP48-205ENST00000421625 RPL27AP46776 148 aaKnown RBP16.87■□□□□ 0.29
USP48-205ENST00000421625 NHLH1Q02575 133 aa16.87■□□□□ 0.29
USP48-205ENST00000421625 AP1S3Q96PC3 154 aa16.87■□□□□ 0.29
USP48-205ENST00000421625 CRIP1P50238 77 aa16.86■□□□□ 0.29
USP48-205ENST00000421625 LYPD2Q6UXB3 125 aa16.86■□□□□ 0.29
USP48-205ENST00000421625 H3BRM9 83 aa16.86■□□□□ 0.29
USP48-205ENST00000421625 GOSR1O95249 250 aa16.86■□□□□ 0.29
USP48-205ENST00000421625 SIGLEC8Q9NYZ4 499 aa16.86■□□□□ 0.29
USP48-205ENST00000421625 THYN1Q9P016 225 aa16.86■□□□□ 0.29
USP48-205ENST00000421625 D6R8Y8 96 aa16.85■□□□□ 0.29
USP48-205ENST00000421625 CACNG7P62955 275 aa16.85■□□□□ 0.29
USP48-205ENST00000421625 KIR3DS1Q14943 382 aa16.85■□□□□ 0.29
USP48-205ENST00000421625 GTF2H5Q6ZYL4 71 aa16.85■□□□□ 0.29
USP48-205ENST00000421625 GATD1Q8NB37 220 aa16.85■□□□□ 0.29
USP48-205ENST00000421625 PIEZO2Q9H5I5 2752 aa16.85■□□□□ 0.29
USP48-205ENST00000421625 SERTM2A0A1B0GWG4 89 aa16.85■□□□□ 0.29
USP48-205ENST00000421625 FAM27E3Q08E93 113 aa16.85■□□□□ 0.29
USP48-205ENST00000421625 RAB37Q96AX2 223 aa16.85■□□□□ 0.29
USP48-205ENST00000421625 APOBEC3AP31941 199 aaPredicted RBP16.84■□□□□ 0.29
USP48-205ENST00000421625 DLX1P56177 255 aa16.84■□□□□ 0.29
USP48-205ENST00000421625 PRB3Q04118 309 aaPredicted RBP16.84■□□□□ 0.29
USP48-205ENST00000421625 BOD1L2Q8IYS8 172 aa16.84■□□□□ 0.29
USP48-205ENST00000421625 TMEM14CQ9P0S9 112 aa16.84■□□□□ 0.29
USP48-205ENST00000421625 A6NDN8 102 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms