RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 HIGD1AQ9Y241 93 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 LSM5Q9Y4Y9 91 aaKnown RBP11.93□□□□□ -0.5
LINC00404-201ENST00000418660 LYSTQ99698 3801 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
LINC00404-201ENST00000418660 EBLN2Q6P2I7 272 aa11.92□□□□□ -0.5
LINC00404-201ENST00000418660 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.92□□□□□ -0.5
LINC00404-201ENST00000418660 S100A7AQ86SG5 101 aa11.92□□□□□ -0.5
LINC00404-201ENST00000418660 RPRMQ9NS64 109 aa11.92□□□□□ -0.5
LINC00404-201ENST00000418660 UPK1BO75841 260 aa11.91□□□□□ -0.5
LINC00404-201ENST00000418660 LY6G6CO95867 125 aa11.91□□□□□ -0.5
LINC00404-201ENST00000418660 OR5G3P0C626 314 aa11.91□□□□□ -0.5
LINC00404-201ENST00000418660 RPL7P18124 248 aaKnown RBP11.91□□□□□ -0.5
LINC00404-201ENST00000418660 SLC38A11Q08AI6 406 aa11.91□□□□□ -0.5
LINC00404-201ENST00000418660 OR4B1Q8NGF8 309 aa11.91□□□□□ -0.5
LINC00404-201ENST00000418660 C20orf173Q96LM9 149 aa11.91□□□□□ -0.5
LINC00404-201ENST00000418660 C11orf1Q9H5F2 150 aa11.91□□□□□ -0.5
LINC00404-201ENST00000418660 ELOA3CA0A087WX78 387 aaPredicted RBP11.9□□□□□ -0.5
LINC00404-201ENST00000418660 A0A0J9YX75 114 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 F6UB75 175 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 GOSR2O14653 212 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 PVALBP20472 110 aaPredicted RBP11.9□□□□□ -0.5
LINC00404-201ENST00000418660 BCAP31P51572 246 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 PXDC1Q5TGL8 231 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 FAM78BQ5VT40 261 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 ZNF546Q86UE3 836 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 ARL6Q9H0F7 186 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 PTTG2Q9NZH5 202 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
LINC00404-201ENST00000418660 AGPAT2O15120 278 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 CAV2P51636 162 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 FXYD7P58549 80 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 PSG9Q00887 426 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 IL15RAQ13261 267 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 PATE2Q6UY27 113 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
LINC00404-201ENST00000418660 ZNF709Q8N972 641 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 ENKURQ8TC29 256 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 UHRF2Q96PU4 802 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 NEU1Q99519 415 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 ARV1Q9H2C2 271 aa11.89□□□□□ -0.51
LINC00404-201ENST00000418660 TRAV8-2A0A0B4J237 113 aa11.88□□□□□ -0.51
LINC00404-201ENST00000418660 FAM24AA6NFZ4 105 aa11.88□□□□□ -0.51
LINC00404-201ENST00000418660 C11orf94C9JXX5 98 aa11.88□□□□□ -0.51
LINC00404-201ENST00000418660 HLA-DMBP28068 263 aa11.88□□□□□ -0.51
LINC00404-201ENST00000418660 C2CD4CQ8TF44 421 aa11.88□□□□□ -0.51
LINC00404-201ENST00000418660 MGST2Q99735 147 aa11.88□□□□□ -0.51
LINC00404-201ENST00000418660 SLC35B3Q9H1N7 401 aa11.88□□□□□ -0.51
LINC00404-201ENST00000418660 GPN1Q9HCN4 374 aaPredicted RBP11.88□□□□□ -0.51
LINC00404-201ENST00000418660 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
LINC00404-201ENST00000418660 A8MTW9 85 aa11.87□□□□□ -0.51
LINC00404-201ENST00000418660 ZNF705FA8MVS1 300 aaPredicted RBP11.87□□□□□ -0.51
LINC00404-201ENST00000418660 CST7O76096 145 aa11.87□□□□□ -0.51
LINC00404-201ENST00000418660 ZNF705DP0CH99 300 aaPredicted RBP11.87□□□□□ -0.51
LINC00404-201ENST00000418660 ZNF705BP0CI00 300 aaPredicted RBP11.87□□□□□ -0.51
LINC00404-201ENST00000418660 S100A10P60903 97 aa11.87□□□□□ -0.51
LINC00404-201ENST00000418660 IFITM3Q01628 133 aa11.87□□□□□ -0.51
LINC00404-201ENST00000418660 FGL1Q08830 312 aa11.87□□□□□ -0.51
LINC00404-201ENST00000418660 RAB32Q13637 225 aa11.87□□□□□ -0.51
LINC00404-201ENST00000418660 ALMS1Q8TCU4 4167 aa11.86□□□□□ -0.51
LINC00404-201ENST00000418660 A0A087X0K7 114 aa11.86□□□□□ -0.51
LINC00404-201ENST00000418660 DUSP14O95147 198 aaKnown RBP11.86□□□□□ -0.51
LINC00404-201ENST00000418660 TCTAP57738 103 aa11.86□□□□□ -0.51
LINC00404-201ENST00000418660 RAB31Q13636 194 aa11.86□□□□□ -0.51
LINC00404-201ENST00000418660 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
LINC00404-201ENST00000418660 RNF182Q8N6D2 247 aa11.86□□□□□ -0.51
LINC00404-201ENST00000418660 LYRM2Q9NU23 88 aaPredicted RBP11.86□□□□□ -0.51
LINC00404-201ENST00000418660 UQCC1Q9NVA1 299 aa11.86□□□□□ -0.51
LINC00404-201ENST00000418660 PLECQ15149 4684 aaKnown RBP11.85□□□□□ -0.51
LINC00404-201ENST00000418660 MRPS12O15235 138 aaKnown RBP11.85□□□□□ -0.51
LINC00404-201ENST00000418660 S100A11P31949 105 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 CAMLGP49069 296 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 SULT1A1P50225 295 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 VWC2Q2TAL6 325 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 LGALS9CQ6DKI2 356 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 AMTNQ6UX39 209 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 Q6ZTC4 211 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 NRARPQ7Z6K4 114 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 TMEM252Q8N6L7 170 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 WDR83OSQ9Y284 106 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 GOLT1BQ9Y3E0 138 aa11.85□□□□□ -0.51
LINC00404-201ENST00000418660 IGHV3OR16-12A0A075B7B8 117 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 TRAV10A0A0B4J240 114 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 IGSF23A1L1A6 192 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 TMEM189A5PLL7 270 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 COX7A2P2O60397 106 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 CNN1P51911 297 aaKnown RBP11.84□□□□□ -0.51
LINC00404-201ENST00000418660 STX12Q86Y82 276 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 C1orf158Q8N1D5 194 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 LRRC20Q8TCA0 184 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 TMEM37Q8WXS4 190 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 CELA1Q9UNI1 258 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 RFNGQ9Y644 331 aa11.84□□□□□ -0.51
LINC00404-201ENST00000418660 IGLL5B9A064 214 aa11.83□□□□□ -0.52
LINC00404-201ENST00000418660 INMT-MINDY4F8WBC2 141 aa11.83□□□□□ -0.52
LINC00404-201ENST00000418660 PRAF2O60831 178 aa11.83□□□□□ -0.52
LINC00404-201ENST00000418660 AMBPP02760 352 aa11.83□□□□□ -0.52
LINC00404-201ENST00000418660 CXCL3P19876 107 aa11.83□□□□□ -0.52
LINC00404-201ENST00000418660 HBG1P69891 147 aa11.83□□□□□ -0.52
LINC00404-201ENST00000418660 HBG2P69892 147 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms