RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 SMCO3A2RU48 225 aa13.6□□□□□ -0.23
UBXN4-202ENST00000415164 WRBO00258 174 aa13.6□□□□□ -0.23
UBXN4-202ENST00000415164 CFDP00746 253 aaPredicted RBP13.6□□□□□ -0.23
UBXN4-202ENST00000415164 PRB4P10163 310 aaPredicted RBP13.6□□□□□ -0.23
UBXN4-202ENST00000415164 FAM3BP58499 235 aaPredicted RBP13.6□□□□□ -0.23
UBXN4-202ENST00000415164 RHOBP62745 196 aa13.6□□□□□ -0.23
UBXN4-202ENST00000415164 RPP30P78346 268 aaKnown RBP13.6□□□□□ -0.23
UBXN4-202ENST00000415164 C6orf223Q8N319 242 aa13.6□□□□□ -0.23
UBXN4-202ENST00000415164 MAPKAPK5-AS1Q8N8E1 139 aa13.6□□□□□ -0.23
UBXN4-202ENST00000415164 SLC25A39Q9BZJ4 359 aaPredicted RBP13.6□□□□□ -0.23
UBXN4-202ENST00000415164 NACAE9PAV3 2078 aa13.6□□□□□ -0.23
UBXN4-202ENST00000415164 MED6O75586 246 aa13.59□□□□□ -0.23
UBXN4-202ENST00000415164 VAMP1P23763 118 aa13.59□□□□□ -0.23
UBXN4-202ENST00000415164 ALDH3B2P48448 385 aa13.59□□□□□ -0.23
UBXN4-202ENST00000415164 LINC01587Q99440 93 aa13.59□□□□□ -0.23
UBXN4-202ENST00000415164 RABL2AQ9UBK7 228 aaPredicted RBP13.59□□□□□ -0.23
UBXN4-202ENST00000415164 RABL2BQ9UNT1 228 aa13.59□□□□□ -0.23
UBXN4-202ENST00000415164 H3BP45 60 aa13.58□□□□□ -0.24
UBXN4-202ENST00000415164 CRXO43186 299 aaPredicted RBP13.58□□□□□ -0.24
UBXN4-202ENST00000415164 AZU1P20160 251 aa13.58□□□□□ -0.24
UBXN4-202ENST00000415164 S100A7P31151 101 aa13.58□□□□□ -0.24
UBXN4-202ENST00000415164 CCL18P55774 89 aa13.58□□□□□ -0.24
UBXN4-202ENST00000415164 HIST1H1AQ02539 215 aaPredicted RBP13.58□□□□□ -0.24
UBXN4-202ENST00000415164 CLINT1Q14677 625 aa13.58□□□□□ -0.24
UBXN4-202ENST00000415164 SPANXN5Q5MJ07 72 aa13.58□□□□□ -0.24
UBXN4-202ENST00000415164 TMEM182Q6ZP80 229 aaPredicted RBP13.58□□□□□ -0.24
UBXN4-202ENST00000415164 C17orf77Q96MU5 243 aa13.58□□□□□ -0.24
UBXN4-202ENST00000415164 GPR82Q96P67 336 aa13.58□□□□□ -0.24
UBXN4-202ENST00000415164 RSL24D1Q9UHA3 163 aaKnown RBP13.58□□□□□ -0.24
UBXN4-202ENST00000415164 TRAV8-2A0A0B4J237 113 aa13.57□□□□□ -0.24
UBXN4-202ENST00000415164 PIGBOS1A0A0B4J2F0 54 aa13.57□□□□□ -0.24
UBXN4-202ENST00000415164 ATP5G1P05496 136 aa13.57□□□□□ -0.24
UBXN4-202ENST00000415164 ATP5G3P48201 142 aa13.57□□□□□ -0.24
UBXN4-202ENST00000415164 ZNRF2Q8NHG8 242 aa13.57□□□□□ -0.24
UBXN4-202ENST00000415164 LRRC20Q8TCA0 184 aa13.57□□□□□ -0.24
UBXN4-202ENST00000415164 CIB3Q96Q77 187 aaPredicted RBP13.57□□□□□ -0.24
UBXN4-202ENST00000415164 SLC45A2Q9UMX9 530 aa13.57□□□□□ -0.24
UBXN4-202ENST00000415164 DUXBA0A1W2PPF3 345 aa13.56□□□□□ -0.24
UBXN4-202ENST00000415164 A8MTW9 85 aa13.56□□□□□ -0.24
UBXN4-202ENST00000415164 BOLA2-SMG1P6H3BVE0 249 aa13.56□□□□□ -0.24
UBXN4-202ENST00000415164 SYNGR2O43760 224 aa13.56□□□□□ -0.24
UBXN4-202ENST00000415164 PITX3O75364 302 aa13.56□□□□□ -0.24
UBXN4-202ENST00000415164 HOXB5P09067 269 aa13.56□□□□□ -0.24
UBXN4-202ENST00000415164 FAUP35544 74 aaKnown RBP13.56□□□□□ -0.24
UBXN4-202ENST00000415164 B2MP61769 119 aa13.56□□□□□ -0.24
UBXN4-202ENST00000415164 OR4D5Q8NGN0 318 aa13.56□□□□□ -0.24
UBXN4-202ENST00000415164 FABP12A6NFH5 140 aa13.55□□□□□ -0.24
UBXN4-202ENST00000415164 RAP2BP61225 183 aa13.55□□□□□ -0.24
UBXN4-202ENST00000415164 ACOT7LQ6ZUV0 252 aa13.55□□□□□ -0.24
UBXN4-202ENST00000415164 MRPS26Q9BYN8 205 aaKnown RBP13.55□□□□□ -0.24
UBXN4-202ENST00000415164 CCDC59Q9P031 241 aaKnown RBP13.55□□□□□ -0.24
UBXN4-202ENST00000415164 IL5P05113 134 aa13.54□□□□□ -0.24
UBXN4-202ENST00000415164 OR5G3P0C626 314 aa13.54□□□□□ -0.24
UBXN4-202ENST00000415164 TMEM128Q5BJH2 165 aa13.54□□□□□ -0.24
UBXN4-202ENST00000415164 RNF141Q8WVD5 230 aa13.54□□□□□ -0.24
UBXN4-202ENST00000415164 HIGD1AQ9Y241 93 aa13.54□□□□□ -0.24
UBXN4-202ENST00000415164 STRAPQ9Y3F4 350 aaKnown RBP13.54□□□□□ -0.24
UBXN4-202ENST00000415164 LINC00588Q9Y4M8 146 aa13.54□□□□□ -0.24
UBXN4-202ENST00000415164 PRSS46E5RG02 174 aa13.53□□□□□ -0.24
UBXN4-202ENST00000415164 H3BRN7 92 aa13.53□□□□□ -0.24
UBXN4-202ENST00000415164 TSPOP30536 169 aa13.53□□□□□ -0.24
UBXN4-202ENST00000415164 CYP2G1PQ6ZSU1 146 aa13.53□□□□□ -0.24
UBXN4-202ENST00000415164 DYNC2LI1Q8TCX1 351 aa13.53□□□□□ -0.24
UBXN4-202ENST00000415164 PLAC8L1A1L4L8 177 aa13.52□□□□□ -0.25
UBXN4-202ENST00000415164 CBY3A6NI87 242 aa13.52□□□□□ -0.25
UBXN4-202ENST00000415164 CDK2AP2O75956 126 aa13.52□□□□□ -0.25
UBXN4-202ENST00000415164 SLC25A6P12236 298 aa13.52□□□□□ -0.25
UBXN4-202ENST00000415164 RPL7P18124 248 aaKnown RBP13.52□□□□□ -0.25
UBXN4-202ENST00000415164 OR5I1Q13606 314 aa13.52□□□□□ -0.25
UBXN4-202ENST00000415164 SSX7Q7RTT5 188 aa13.52□□□□□ -0.25
UBXN4-202ENST00000415164 C16orf74Q96GX8 76 aa13.52□□□□□ -0.25
UBXN4-202ENST00000415164 UHRF2Q96PU4 802 aa13.52□□□□□ -0.25
UBXN4-202ENST00000415164 NOP10Q9NPE3 64 aaKnown RBP13.52□□□□□ -0.25
UBXN4-202ENST00000415164 APOBP04114 4563 aaKnown RBP13.52□□□□□ -0.25
UBXN4-202ENST00000415164 HYPMO75409 117 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 LINC00869P0C866 280 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 TNFSF8P32971 234 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 TAS2R60P59551 318 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 PYDC2Q56P42 97 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 TMEM144Q7Z5S9 345 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 SPATA12Q7Z6I5 190 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 TMEM256Q8N2U0 113 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 TOMM5Q8N4H5 51 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 OR8A1Q8NGG7 326 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 MCFD2Q8NI22 146 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 RAB2BQ8WUD1 216 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 SHANK2-AS3Q9BTD1 123 aa13.51□□□□□ -0.25
UBXN4-202ENST00000415164 TIMM8BQ9Y5J9 83 aaPredicted RBP13.51□□□□□ -0.25
UBXN4-202ENST00000415164 NOL3O60936 208 aaKnown RBP13.5□□□□□ -0.25
UBXN4-202ENST00000415164 SFT2D2O95562 160 aa13.5□□□□□ -0.25
UBXN4-202ENST00000415164 AP3S2P59780 193 aa13.5□□□□□ -0.25
UBXN4-202ENST00000415164 RRAS2P62070 204 aaPredicted RBP13.5□□□□□ -0.25
UBXN4-202ENST00000415164 PPP1R1AQ13522 171 aa13.5□□□□□ -0.25
UBXN4-202ENST00000415164 PSG3Q16557 428 aa13.5□□□□□ -0.25
UBXN4-202ENST00000415164 LRTM2Q8N967 370 aa13.5□□□□□ -0.25
UBXN4-202ENST00000415164 DNAH5Q8TE73 4624 aa13.49□□□□□ -0.25
UBXN4-202ENST00000415164 A0A0J9YY99 117 aa13.49□□□□□ -0.25
UBXN4-202ENST00000415164 SNRPCP09234 159 aaKnown RBP13.49□□□□□ -0.25
UBXN4-202ENST00000415164 CXCL3P19876 107 aa13.49□□□□□ -0.25
UBXN4-202ENST00000415164 ANXA7P20073 488 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms