RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 SPCS3P61009 180 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 ERHP84090 104 aaKnown RBP3.28□□□□□ -1.88
PTPRK-209ENST00000415046 RUNX1Q01196 453 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 SMCO1Q147U7 214 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 RPEL1Q2QD12 228 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 Q56UQ5 140 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 NMSQ5H8A3 153 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 ZNF343Q6P1L6 599 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 CD164L2Q6UWJ8 174 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 HSD17B13Q7Z5P4 300 aaPredicted RBP3.28□□□□□ -1.88
PTPRK-209ENST00000415046 ZNF429Q86V71 674 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 EEF1AKMT3Q96AZ1 226 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 USMG5Q96IX5 58 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 MAGT1Q9H0U3 335 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 RBKSQ9H477 322 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 SHPKQ9UHJ6 478 aa3.28□□□□□ -1.88
PTPRK-209ENST00000415046 PAIP2BQ9ULR5 123 aaKnown RBP3.28□□□□□ -1.88
PTPRK-209ENST00000415046 F11RQ9Y624 299 aaKnown RBP3.28□□□□□ -1.88
PTPRK-209ENST00000415046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.27□□□□□ -1.89
PTPRK-209ENST00000415046 DUXBA0A1W2PPF3 345 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 OR2T8A6NH00 312 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 MPTX1A8MV57 137 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 H3BP45 60 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 K7EIM0 57 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 WRBO00258 174 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 ZNF207O43670 478 aaKnown RBP3.27□□□□□ -1.89
PTPRK-209ENST00000415046 BRI3O95415 125 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 MT-CO2P00403 227 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 IFNA10P01566 189 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 IFNA21P01568 189 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 ZP3P21754 424 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 NPY1RP25929 384 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 OPRK1P41145 380 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 HERV-K104P63124 156 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 DEFA6Q01524 100 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 TNFRSF9Q07011 255 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 IAH1Q2TAA2 248 aaPredicted RBP3.27□□□□□ -1.89
PTPRK-209ENST00000415046 MAJINQ3KP22 176 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 KRTAP13-3Q3SY46 172 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 C9orf66Q5T8R8 295 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 C12orf45Q8N5I9 185 aaPredicted RBP3.27□□□□□ -1.89
PTPRK-209ENST00000415046 OR1P1Q8NH06 330 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 COQ8AQ8NI60 647 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 ZNF502Q8TBZ5 544 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 DTD1Q8TEA8 209 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 ZNF431Q8TF32 576 aaPredicted RBP3.27□□□□□ -1.89
PTPRK-209ENST00000415046 CXorf58Q96LI9 332 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 TXN2Q99757 166 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 TMEM231Q9H6L2 316 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 C21orf62Q9NYP8 219 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 THYN1Q9P016 225 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 GSKIPQ9P0R6 139 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 TENM2Q9NT68 2774 aa3.27□□□□□ -1.89
PTPRK-209ENST00000415046 IGHV3-49A0A0A0MS15 119 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 TRBV7-1A0A0A6YYK4 115 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 PIGBOS1A0A0B4J2F0 54 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 INMT-MINDY4F8WBC2 141 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 I3L2K1 104 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 TGOLN2O43493 480 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 SSSCA1O60232 199 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 GNG7O60262 68 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 GGCTO75223 188 aaKnown RBP3.26□□□□□ -1.89
PTPRK-209ENST00000415046 MED6O75586 246 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 SIX6O95475 246 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 IFNA4P05014 189 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 HTR2BP41595 481 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 SUB1P53999 127 aaKnown RBP eCLIP3.26□□□□□ -1.89
PTPRK-209ENST00000415046 S100A10P60903 97 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 SSTP61278 116 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 KLF5Q13887 457 aaPredicted RBP3.26□□□□□ -1.89
PTPRK-209ENST00000415046 PLET1Q6UQ28 207 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 COX8CQ7Z4L0 72 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 WFDC9Q8NEX5 89 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 OR1L6Q8NGR2 347 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 VN1R17PQ8TDU5 208 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 DYNLRB2Q8TF09 96 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 MITD1Q8WV92 249 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 CACNG8Q8WXS5 425 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 ACY3Q96HD9 319 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 OR10C1Q96KK4 312 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 OR4C12Q96R67 309 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 CHRDL1Q9BU40 450 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 C20orf24Q9BUV8 137 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 GPR61Q9BZJ8 451 aa3.26□□□□□ -1.89
PTPRK-209ENST00000415046 MRPL36Q9P0J6 103 aaKnown RBP3.26□□□□□ -1.89
PTPRK-209ENST00000415046 RCL1Q9Y2P8 373 aaKnown RBP3.26□□□□□ -1.89
PTPRK-209ENST00000415046 LSM5Q9Y4Y9 91 aaKnown RBP3.26□□□□□ -1.89
PTPRK-209ENST00000415046 IGHV3OR16-13A0A075B7E8 117 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 IGHV3-74A0A0B4J1X5 117 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 WI2-2373I1.2A0A1W2PRP0 233 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 SMCO3A2RU48 225 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 C2orf70A6NJV1 201 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 GOSR2O14653 212 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 SYNGR2O43760 224 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 SSNA1O43805 119 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 PITX3O75364 302 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 CLN5O75503 358 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 CCNKO75909 580 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 YIF1AO95070 293 aa3.25□□□□□ -1.89
PTPRK-209ENST00000415046 IL5P05113 134 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms