RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 HES1Q14469 280 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 FAM27BQ5VT28 67 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 C12orf45Q8N5I9 185 aaPredicted RBP3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 Q8NDZ9 215 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 SLC25A40Q8TBP6 338 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 CKLFQ9UBR5 152 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 ERGIC3Q9Y282 383 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 EP300Q09472 2414 aaPredicted RBP3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 ALPK3Q96L96 1907 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 BRWD1Q9NSI6 2320 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 TRIOO75962 3097 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 PLXNA3P51805 1871 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 NAV2Q8IVL1 2488 aa3.15□□□□□ -1.9
SMC4P1-201ENST00000414479 ZNF705FA8MVS1 300 aaPredicted RBP3.15□□□□□ -1.91
SMC4P1-201ENST00000414479 C19orf84I3L1E1 186 aa3.15□□□□□ -1.91
SMC4P1-201ENST00000414479 TCL1BO95988 128 aa3.15□□□□□ -1.91
SMC4P1-201ENST00000414479 SMIM17P0DL12 118 aa3.15□□□□□ -1.91
SMC4P1-201ENST00000414479 KRR1Q13601 381 aaKnown RBP3.15□□□□□ -1.91
SMC4P1-201ENST00000414479 POU6F1Q14863 301 aa3.15□□□□□ -1.91
SMC4P1-201ENST00000414479 GOLT1AQ6ZVE7 132 aa3.15□□□□□ -1.91
SMC4P1-201ENST00000414479 GPR146Q96CH1 333 aa3.15□□□□□ -1.91
SMC4P1-201ENST00000414479 MDC1Q14676 2089 aaKnown RBP3.15□□□□□ -1.91
SMC4P1-201ENST00000414479 KIF20BQ96Q89 1820 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 MED23Q9ULK4 1368 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 ASH1LQ9NR48 2969 aaKnown RBP3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 COL4A2P08572 1712 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 SETXQ7Z333 2677 aaKnown RBP3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 SPTBN2O15020 2390 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 SDCBPO00560 298 aaPredicted RBP3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 NAPSAO96009 420 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 DEFA4P12838 97 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 G6PCP35575 357 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 SUPT4H1P63272 117 aaKnown RBP3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 AAED1Q7RTV5 226 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 HIST3H2BBQ8N257 126 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 ZNF439Q8NDP4 499 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 WFDC11Q8NEX6 87 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 OR8B3Q8NGG8 313 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 TERB2Q8NHR7 220 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 CST9LQ9H4G1 147 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 RNF122Q9H9V4 155 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 TP73-AS1Q9UF72 201 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 PYCARDQ9ULZ3 195 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 CEP250Q9BV73 2442 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 SCN10AQ9Y5Y9 1956 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 DMXL1Q9Y485 3027 aa3.14□□□□□ -1.91
SMC4P1-201ENST00000414479 MAP1BP46821 2468 aaKnown RBP3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 ANKRD36CQ5JPF3 1778 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 A0A1B0GVG6 124 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 F8W036 122 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 ORC5O43913 435 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 CIAO1O76071 339 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 HTR1AP08908 422 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 PPP1R2P41236 205 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 FKBP1CQ5VVH2 108 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 PPP1R2P3Q6NXS1 205 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 CLVS1Q8IUQ0 354 aaPredicted RBP3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 RNASE11Q8TAA1 199 aaKnown RBP3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 BAIAP2Q9UQB8 552 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 PRRC2BQ5JSZ5 2229 aaKnown RBP3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 BPTFQ12830 3046 aa3.13□□□□□ -1.91
SMC4P1-201ENST00000414479 PSME4Q14997 1843 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 MYO15AQ9UKN7 3530 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 CPAMD8Q8IZJ3 1885 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 ZFYVE26Q68DK2 2539 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 PGLYRP1O75594 196 aaPredicted RBP3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 GPX1P07203 203 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 CDC42P60953 191 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 KISS1Q15726 138 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 DHFR2Q86XF0 187 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 C10orf126Q8N4M7 172 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 LINC00471Q8N535 108 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 OSTCQ9NRP0 149 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 USP24Q9UPU5 2620 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 DNAH14Q0VDD8 3507 aa3.12□□□□□ -1.91
SMC4P1-201ENST00000414479 WDR87Q6ZQQ6 2873 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 DDX60LQ5H9U9 1706 aaKnown RBP3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 ZNF292O60281 2723 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 BUB1B-PAK6H3BSN5 160 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 HMGB3O15347 200 aaKnown RBP3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 ATG12O94817 140 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 SERPINB9P50453 376 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 KRTAP10-1P60331 282 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 ARHGAP11BQ3KRB8 267 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 DEFB128Q7Z7B8 93 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 STX12Q86Y82 276 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 PFN4Q8NHR9 129 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 FAM172AQ8WUF8 416 aa3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 CNOT1A5YKK6 2376 aaKnown RBP3.11□□□□□ -1.91
SMC4P1-201ENST00000414479 SIPA1L3O60292 1781 aaPredicted RBP3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 NUP98P52948 1817 aa3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 NOTCH2Q04721 2471 aa3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 ASPMQ8IZT6 3477 aa3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 TRAPPC13A5PLN9 417 aa3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 AIPO00170 330 aa3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 OR2J2O76002 312 aa3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 IFNA7P01567 189 aa3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 PMP2P02689 132 aa3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 C1QCP02747 245 aa3.1□□□□□ -1.91
SMC4P1-201ENST00000414479 AQP4P55087 323 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms