RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZNF709Q8N972 641 aa10.86□□□□□ -0.67
CHD1-202ENST00000414220 OR5C1Q8NGR4 320 aa10.86□□□□□ -0.67
CHD1-202ENST00000414220 LRRC20Q8TCA0 184 aa10.86□□□□□ -0.67
CHD1-202ENST00000414220 MGST2Q99735 147 aa10.86□□□□□ -0.67
CHD1-202ENST00000414220 RSG1Q9BU20 258 aa10.86□□□□□ -0.67
CHD1-202ENST00000414220 SLC25A32Q9H2D1 315 aa10.86□□□□□ -0.67
CHD1-202ENST00000414220 RETNQ9HD89 108 aa10.86□□□□□ -0.67
CHD1-202ENST00000414220 OR5AC2Q9NZP5 309 aa10.86□□□□□ -0.67
CHD1-202ENST00000414220 RPL29P47914 159 aaKnown RBP10.85□□□□□ -0.67
CHD1-202ENST00000414220 FGL1Q08830 312 aa10.85□□□□□ -0.67
CHD1-202ENST00000414220 DEFB135Q30KP9 77 aa10.85□□□□□ -0.67
CHD1-202ENST00000414220 C10orf113Q5VZT2 155 aa10.85□□□□□ -0.67
CHD1-202ENST00000414220 SPATA31B1PQ5VZV4 182 aa10.85□□□□□ -0.67
CHD1-202ENST00000414220 LINC00305Q7Z4B0 112 aa10.85□□□□□ -0.67
CHD1-202ENST00000414220 GATAD1Q8WUU5 269 aa10.85□□□□□ -0.67
CHD1-202ENST00000414220 ASB13Q8WXK3 278 aa10.85□□□□□ -0.67
CHD1-202ENST00000414220 DNAJC4Q9NNZ3 241 aa10.85□□□□□ -0.67
CHD1-202ENST00000414220 KCNIP2Q9NS61 270 aa10.85□□□□□ -0.67
CHD1-202ENST00000414220 C17orf112F2Z3M2 114 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 CA1P00915 261 aaPredicted RBP10.84□□□□□ -0.67
CHD1-202ENST00000414220 B2MP61769 119 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 NHLH2Q02577 135 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 EBLN2Q6P2I7 272 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 BPIFA4PQ86YQ2 179 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 MUC7Q8TAX7 377 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 CHAC2Q8WUX2 184 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 RNF183Q96D59 192 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 OVOL2Q9BRP0 275 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 SCRT1Q9BWW7 348 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 C1QTNF4Q9BXJ3 329 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 RPRMQ9NS64 109 aa10.84□□□□□ -0.67
CHD1-202ENST00000414220 KNCNA6PVL3 124 aa10.83□□□□□ -0.68
CHD1-202ENST00000414220 H0YIZ8 118 aa10.83□□□□□ -0.68
CHD1-202ENST00000414220 IFNA5P01569 189 aa10.83□□□□□ -0.68
CHD1-202ENST00000414220 RPL12P30050 165 aaKnown RBP10.83□□□□□ -0.68
CHD1-202ENST00000414220 MIC13Q5XKP0 118 aa10.83□□□□□ -0.68
CHD1-202ENST00000414220 TRPT1Q86TN4 253 aaKnown RBP10.83□□□□□ -0.68
CHD1-202ENST00000414220 SCGB1C1Q8TD33 95 aa10.83□□□□□ -0.68
CHD1-202ENST00000414220 UHRF2Q96PU4 802 aa10.83□□□□□ -0.68
CHD1-202ENST00000414220 SLC39A9Q9NUM3 307 aa10.83□□□□□ -0.68
CHD1-202ENST00000414220 LYL1P12980 280 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 PRR20EP86478 221 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 PRR20CP86479 221 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 PRR20DP86480 221 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 PRR20BP86481 221 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 PRR20AP86496 221 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 CLINT1Q14677 625 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 OPCMLQ14982 345 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 PATE2Q6UY27 113 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 FOXI2Q6ZQN5 318 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 RNF126Q9BV68 326 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 EDA2RQ9HAV5 297 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 MBD2Q9UBB5 411 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 PXMP4Q9Y6I8 212 aa10.82□□□□□ -0.68
CHD1-202ENST00000414220 CXCL2P19875 107 aa10.81□□□□□ -0.68
CHD1-202ENST00000414220 FCN2Q15485 313 aa10.81□□□□□ -0.68
CHD1-202ENST00000414220 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.81□□□□□ -0.68
CHD1-202ENST00000414220 ATP5SQ99766 215 aa10.81□□□□□ -0.68
CHD1-202ENST00000414220 RARRES2Q99969 163 aa10.81□□□□□ -0.68
CHD1-202ENST00000414220 NPCDR1Q9BY65 106 aa10.81□□□□□ -0.68
CHD1-202ENST00000414220 HSPB11Q9Y547 144 aa10.81□□□□□ -0.68
CHD1-202ENST00000414220 COL7A1Q02388 2944 aa10.81□□□□□ -0.68
CHD1-202ENST00000414220 A0A087X0K7 114 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 H3BMM0 161 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 SOCS3O14543 225 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 HLA-DRB4P13762 266 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 CXCL3P19876 107 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 LCN15Q6UWW0 184 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 TMEM37Q8WXS4 190 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 SLC50A1Q9BRV3 221 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 WDR61Q9GZS3 305 aaKnown RBP10.8□□□□□ -0.68
CHD1-202ENST00000414220 SAV1Q9H4B6 383 aaPredicted RBP10.8□□□□□ -0.68
CHD1-202ENST00000414220 CLEC5AQ9NY25 188 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 HLA-DRB4X5D2U9 266 aa10.8□□□□□ -0.68
CHD1-202ENST00000414220 DUSP14O95147 198 aaKnown RBP10.79□□□□□ -0.68
CHD1-202ENST00000414220 GIPP09681 153 aaPredicted RBP10.79□□□□□ -0.68
CHD1-202ENST00000414220 OXA1LQ15070 435 aa10.79□□□□□ -0.68
CHD1-202ENST00000414220 GUK1Q16774 197 aa10.79□□□□□ -0.68
CHD1-202ENST00000414220 OR11H7Q8NGC8 314 aa10.79□□□□□ -0.68
CHD1-202ENST00000414220 OR4B1Q8NGF8 309 aa10.79□□□□□ -0.68
CHD1-202ENST00000414220 OR11H2Q8NH07 326 aa10.79□□□□□ -0.68
CHD1-202ENST00000414220 INO80EQ8NBZ0 244 aaPredicted RBP10.78□□□□□ -0.68
CHD1-202ENST00000414220 CLUHP3Q96NS8 147 aa10.78□□□□□ -0.68
CHD1-202ENST00000414220 SMIM3Q9BZL3 60 aa10.78□□□□□ -0.68
CHD1-202ENST00000414220 FAM78BQ5VT40 261 aa10.77□□□□□ -0.69
CHD1-202ENST00000414220 ZNF738Q8NE65 137 aa10.77□□□□□ -0.69
CHD1-202ENST00000414220 HRH4Q9H3N8 390 aa10.77□□□□□ -0.69
CHD1-202ENST00000414220 PPP1R14DQ9NXH3 145 aa10.77□□□□□ -0.69
CHD1-202ENST00000414220 A0A0J9YWU9 116 aa10.76□□□□□ -0.69
CHD1-202ENST00000414220 A0A0J9YX75 114 aa10.76□□□□□ -0.69
CHD1-202ENST00000414220 IGKV3-20P01619 116 aa10.76□□□□□ -0.69
CHD1-202ENST00000414220 PSG9Q00887 426 aa10.76□□□□□ -0.69
CHD1-202ENST00000414220 ZNF266Q14584 549 aa10.76□□□□□ -0.69
CHD1-202ENST00000414220 MRPL32Q9BYC8 188 aaKnown RBP10.76□□□□□ -0.69
CHD1-202ENST00000414220 HUWE1Q7Z6Z7 4374 aaKnown RBP10.76□□□□□ -0.69
CHD1-202ENST00000414220 AMBPP02760 352 aa10.75□□□□□ -0.69
CHD1-202ENST00000414220 PSG3Q16557 428 aa10.75□□□□□ -0.69
CHD1-202ENST00000414220 PARD6GQ9BYG4 376 aaPredicted RBP10.75□□□□□ -0.69
CHD1-202ENST00000414220 TIMM9Q9Y5J7 89 aa10.75□□□□□ -0.69
CHD1-202ENST00000414220 TRAV8-2A0A0B4J237 113 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms