RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 TMEM41BQ5BJD5 291 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 ZNF546Q86UE3 836 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 TMEM252Q8N6L7 170 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 C16orf92Q96LL3 132 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 ARV1Q9H2C2 271 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 CLEC5AQ9NY25 188 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 HLA-DRB4X5D2U9 266 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 PLECQ15149 4684 aaKnown RBP13.72□□□□□ -0.21
TRIM56-202ENST00000412507 PMS2P11Q13670 270 aa13.72□□□□□ -0.21
TRIM56-202ENST00000412507 STX12Q86Y82 276 aa13.72□□□□□ -0.21
TRIM56-202ENST00000412507 C20orf173Q96LM9 149 aa13.72□□□□□ -0.21
TRIM56-202ENST00000412507 NMES1Q9C002 83 aa13.72□□□□□ -0.21
TRIM56-202ENST00000412507 SAV1Q9H4B6 383 aaPredicted RBP13.72□□□□□ -0.21
TRIM56-202ENST00000412507 UQCC1Q9NVA1 299 aa13.72□□□□□ -0.21
TRIM56-202ENST00000412507 SACSQ9NZJ4 4579 aa13.71□□□□□ -0.21
TRIM56-202ENST00000412507 IGKV3-20P01619 116 aa13.71□□□□□ -0.21
TRIM56-202ENST00000412507 ATF4P18848 351 aaPredicted RBP13.71□□□□□ -0.21
TRIM56-202ENST00000412507 S100A11P31949 105 aa13.71□□□□□ -0.21
TRIM56-202ENST00000412507 CAMLGP49069 296 aa13.71□□□□□ -0.21
TRIM56-202ENST00000412507 FGL1Q08830 312 aa13.71□□□□□ -0.21
TRIM56-202ENST00000412507 LRRC37A5PQ49AS3 106 aa13.71□□□□□ -0.21
TRIM56-202ENST00000412507 PXDC1Q5TGL8 231 aa13.71□□□□□ -0.21
TRIM56-202ENST00000412507 SAMD13Q5VXD3 122 aa13.71□□□□□ -0.21
TRIM56-202ENST00000412507 FOXI2Q6ZQN5 318 aa13.71□□□□□ -0.21
TRIM56-202ENST00000412507 UBE2L5PA0A1B0GUS4 154 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 CXorf65A6NEN9 183 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 F6UB75 175 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 DEFB4AO15263 64 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 SSNA1O43805 119 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 RLN2P04090 185 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 RPL7P18124 248 aaKnown RBP13.7□□□□□ -0.22
TRIM56-202ENST00000412507 NUTF2P61970 127 aaKnown RBP13.7□□□□□ -0.22
TRIM56-202ENST00000412507 HBG1P69891 147 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 HBG2P69892 147 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 RAB31Q13636 194 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 VWC2Q2TAL6 325 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 S100A7AQ86SG5 101 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 CSNK1G2-AS1Q8NCQ2 148 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 RPRMQ9NS64 109 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 OR5AC2Q9NZP5 309 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 XCL2Q9UBD3 114 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 WDR83OSQ9Y284 106 aa13.7□□□□□ -0.22
TRIM56-202ENST00000412507 H2BFSP57053 126 aa13.69□□□□□ -0.22
TRIM56-202ENST00000412507 CYCSP99999 105 aaKnown RBP13.69□□□□□ -0.22
TRIM56-202ENST00000412507 MIC13Q5XKP0 118 aa13.69□□□□□ -0.22
TRIM56-202ENST00000412507 IGFL4Q6B9Z1 124 aa13.69□□□□□ -0.22
TRIM56-202ENST00000412507 Q6ZNX1 250 aa13.69□□□□□ -0.22
TRIM56-202ENST00000412507 OR4B1Q8NGF8 309 aa13.69□□□□□ -0.22
TRIM56-202ENST00000412507 C11orf68Q9H3H3 251 aaKnown RBP13.69□□□□□ -0.22
TRIM56-202ENST00000412507 RYR2Q92736 4967 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 TRAV8-2A0A0B4J237 113 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 LCE6AA0A183 80 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 E5RGE8 158 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 H0YIZ8 118 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 COX7A2P2O60397 106 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 FXYD7P58549 80 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 NHLH2Q02577 135 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 BAXQ07812 192 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 ATP6V1FQ16864 119 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 EBLN2Q6P2I7 272 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 LINC00305Q7Z4B0 112 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 TMEM37Q8WXS4 190 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 C1QTNF4Q9BXJ3 329 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 X6R8D5 127 aa13.68□□□□□ -0.22
TRIM56-202ENST00000412507 A0A0J9YX75 114 aa13.67□□□□□ -0.22
TRIM56-202ENST00000412507 ZNF705EA8MWA4 302 aaPredicted RBP13.67□□□□□ -0.22
TRIM56-202ENST00000412507 FAM78BQ5VT40 261 aa13.67□□□□□ -0.22
TRIM56-202ENST00000412507 C10orf113Q5VZT2 155 aa13.67□□□□□ -0.22
TRIM56-202ENST00000412507 SPATA31B1PQ5VZV4 182 aa13.67□□□□□ -0.22
TRIM56-202ENST00000412507 RNF182Q8N6D2 247 aa13.67□□□□□ -0.22
TRIM56-202ENST00000412507 Q8NAQ8 132 aa13.67□□□□□ -0.22
TRIM56-202ENST00000412507 ELOA3CA0A087WX78 387 aaPredicted RBP13.66□□□□□ -0.22
TRIM56-202ENST00000412507 A0A087X0K7 114 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 IGHV4-28A0A0C4DH34 117 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 MRPS12O15235 138 aaKnown RBP13.66□□□□□ -0.22
TRIM56-202ENST00000412507 FGF7P21781 194 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 PRR20EP86478 221 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 PRR20CP86479 221 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 PRR20DP86480 221 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 PRR20BP86481 221 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 PRR20AP86496 221 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 MORN5Q5VZ52 161 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 Q6ZRG5 221 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 PPP1R1CQ8WVI7 109 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 SLC25A31Q9H0C2 315 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 ALG5Q9Y673 324 aa13.66□□□□□ -0.22
TRIM56-202ENST00000412507 RBMY1A1P0DJD3 496 aaKnown RBP13.65□□□□□ -0.22
TRIM56-202ENST00000412507 RBMY1CP0DJD4 496 aa13.65□□□□□ -0.22
TRIM56-202ENST00000412507 MIFP14174 115 aa13.65□□□□□ -0.22
TRIM56-202ENST00000412507 RPL29P47914 159 aaKnown RBP13.65□□□□□ -0.22
TRIM56-202ENST00000412507 NANOS2P60321 138 aaKnown RBP13.65□□□□□ -0.22
TRIM56-202ENST00000412507 OPCMLQ14982 345 aa13.65□□□□□ -0.22
TRIM56-202ENST00000412507 RBMY1FQ15415 496 aaKnown RBP13.65□□□□□ -0.22
TRIM56-202ENST00000412507 ZNF709Q8N972 641 aa13.65□□□□□ -0.22
TRIM56-202ENST00000412507 OR5C1Q8NGR4 320 aa13.65□□□□□ -0.22
TRIM56-202ENST00000412507 C11orf45Q8TAV5 145 aa13.65□□□□□ -0.22
TRIM56-202ENST00000412507 CLUHP3Q96NS8 147 aa13.65□□□□□ -0.22
TRIM56-202ENST00000412507 SLC35B3Q9H1N7 401 aa13.65□□□□□ -0.22
TRIM56-202ENST00000412507 DNAJC4Q9NNZ3 241 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms