RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 RPL7P18124 248 aaKnown RBP15.52■□□□□ 0.08
C4orf48-202ENST00000409860 M6PRP20645 277 aa15.52■□□□□ 0.08
C4orf48-202ENST00000409860 GALR1P47211 349 aa15.52■□□□□ 0.08
C4orf48-202ENST00000409860 PAFAH1B2P68402 229 aa15.52■□□□□ 0.08
C4orf48-202ENST00000409860 FAM78BQ5VT40 261 aa15.52■□□□□ 0.08
C4orf48-202ENST00000409860 STOML3Q8TAV4 291 aa15.52■□□□□ 0.08
C4orf48-202ENST00000409860 ZNF256Q9Y2P7 627 aaPredicted RBP15.52■□□□□ 0.08
C4orf48-202ENST00000409860 IGKV3-7A0A075B6H7 116 aa15.51■□□□□ 0.07
C4orf48-202ENST00000409860 RHOBP62745 196 aa15.51■□□□□ 0.07
C4orf48-202ENST00000409860 BEAN1Q3B7T3 259 aa15.51■□□□□ 0.07
C4orf48-202ENST00000409860 KPRPQ5T749 579 aaPredicted RBP15.51■□□□□ 0.07
C4orf48-202ENST00000409860 SLC51BQ86UW2 128 aa15.51■□□□□ 0.07
C4orf48-202ENST00000409860 BAP18Q8IXM2 172 aa15.51■□□□□ 0.07
C4orf48-202ENST00000409860 FUT9Q9Y231 359 aa15.51■□□□□ 0.07
C4orf48-202ENST00000409860 PKD1L1Q8TDX9 2849 aa15.51■□□□□ 0.07
C4orf48-202ENST00000409860 DNASE2O00115 360 aaPredicted RBP15.5■□□□□ 0.07
C4orf48-202ENST00000409860 SPP1P10451 314 aa15.5■□□□□ 0.07
C4orf48-202ENST00000409860 GP9P14770 177 aa15.5■□□□□ 0.07
C4orf48-202ENST00000409860 RAB2AP61019 212 aa15.5■□□□□ 0.07
C4orf48-202ENST00000409860 AKR1C8PQ5T2L2 129 aa15.5■□□□□ 0.07
C4orf48-202ENST00000409860 MORN5Q5VZ52 161 aa15.5■□□□□ 0.07
C4orf48-202ENST00000409860 STXBP6Q8NFX7 210 aa15.5■□□□□ 0.07
C4orf48-202ENST00000409860 OR10G4Q8NGN3 311 aa15.5■□□□□ 0.07
C4orf48-202ENST00000409860 OR10G9Q8NGN4 311 aa15.5■□□□□ 0.07
C4orf48-202ENST00000409860 OR10G7Q8NGN6 311 aa15.5■□□□□ 0.07
C4orf48-202ENST00000409860 SEPSECSQ9HD40 501 aaKnown RBP15.5■□□□□ 0.07
C4orf48-202ENST00000409860 A0A1W2PPV4 95 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 OR4C46A6NHA9 309 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 ZNF785A8K8V0 405 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 SEC11BP0C7V7 166 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 KRTAP10-11P60412 298 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 TMEM41BQ5BJD5 291 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 MIR17HGQ75NE6 70 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 BPIFA4PQ86YQ2 179 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 GBGT1Q8N5D6 347 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 MS4A6AQ9H2W1 248 aa15.49■□□□□ 0.07
C4orf48-202ENST00000409860 TRAV2A0A0B4J234 112 aa15.48■□□□□ 0.07
C4orf48-202ENST00000409860 TRAV5A0A0B4J249 113 aa15.48■□□□□ 0.07
C4orf48-202ENST00000409860 BOLA2-SMG1P6H3BVE0 249 aa15.48■□□□□ 0.07
C4orf48-202ENST00000409860 ATF4P18848 351 aaPredicted RBP15.48■□□□□ 0.07
C4orf48-202ENST00000409860 TFPI2P48307 235 aa15.48■□□□□ 0.07
C4orf48-202ENST00000409860 SPATA31B1PQ5VZV4 182 aa15.48■□□□□ 0.07
C4orf48-202ENST00000409860 EIF5AL1Q6IS14 154 aaKnown RBP15.48■□□□□ 0.07
C4orf48-202ENST00000409860 FAM122CQ6P4D5 195 aa15.48■□□□□ 0.07
C4orf48-202ENST00000409860 NRN1Q9NPD7 142 aa15.48■□□□□ 0.07
C4orf48-202ENST00000409860 TAS2R45P59539 299 aa15.47■□□□□ 0.07
C4orf48-202ENST00000409860 GTSCR1Q86UQ5 136 aa15.47■□□□□ 0.07
C4orf48-202ENST00000409860 WFDC3Q8IUB2 231 aa15.47■□□□□ 0.07
C4orf48-202ENST00000409860 CDC34P49427 236 aaPredicted RBP15.46■□□□□ 0.07
C4orf48-202ENST00000409860 MEOX2P50222 304 aa15.46■□□□□ 0.07
C4orf48-202ENST00000409860 SAMD13Q5VXD3 122 aa15.46■□□□□ 0.07
C4orf48-202ENST00000409860 PRR25Q96S07 402 aa15.46■□□□□ 0.07
C4orf48-202ENST00000409860 SLC25A2Q9BXI2 301 aa15.46■□□□□ 0.07
C4orf48-202ENST00000409860 KHDC3LQ587J8 217 aa15.45■□□□□ 0.06
C4orf48-202ENST00000409860 TMED6Q8WW62 240 aa15.45■□□□□ 0.06
C4orf48-202ENST00000409860 ACTR3CQ9C0K3 210 aaPredicted RBP15.45■□□□□ 0.06
C4orf48-202ENST00000409860 RPRMQ9NS64 109 aa15.45■□□□□ 0.06
C4orf48-202ENST00000409860 TMEM14CQ9P0S9 112 aa15.45■□□□□ 0.06
C4orf48-202ENST00000409860 SMAD5-AS1Q9Y6J3 95 aa15.45■□□□□ 0.06
C4orf48-202ENST00000409860 A0A087X0K7 114 aa15.44■□□□□ 0.06
C4orf48-202ENST00000409860 UMAD1C9J7I0 102 aa15.44■□□□□ 0.06
C4orf48-202ENST00000409860 K7EQG2 157 aa15.44■□□□□ 0.06
C4orf48-202ENST00000409860 MRPS12O15235 138 aaKnown RBP15.44■□□□□ 0.06
C4orf48-202ENST00000409860 CD81P60033 236 aa15.44■□□□□ 0.06
C4orf48-202ENST00000409860 RPP25LQ8N5L8 163 aaKnown RBP15.44■□□□□ 0.06
C4orf48-202ENST00000409860 DCANP1Q8TF63 244 aa15.44■□□□□ 0.06
C4orf48-202ENST00000409860 FAM167A-AS1Q96KT0 104 aa15.44■□□□□ 0.06
C4orf48-202ENST00000409860 BOLA1Q9Y3E2 137 aa15.44■□□□□ 0.06
C4orf48-202ENST00000409860 OR7C2O60412 319 aa15.43■□□□□ 0.06
C4orf48-202ENST00000409860 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.43■□□□□ 0.06
C4orf48-202ENST00000409860 OR51M1Q9H341 326 aa15.43■□□□□ 0.06
C4orf48-202ENST00000409860 IGLC2P0DOY2 106 aa15.42■□□□□ 0.06
C4orf48-202ENST00000409860 ID1P41134 155 aa15.42■□□□□ 0.06
C4orf48-202ENST00000409860 CMC4P56277 68 aaPredicted RBP15.42■□□□□ 0.06
C4orf48-202ENST00000409860 RAB24Q969Q5 203 aa15.42■□□□□ 0.06
C4orf48-202ENST00000409860 PAXXQ9BUH6 204 aa15.42■□□□□ 0.06
C4orf48-202ENST00000409860 HRH4Q9H3N8 390 aa15.42■□□□□ 0.06
C4orf48-202ENST00000409860 SORL1Q92673 2214 aa15.41■□□□□ 0.06
C4orf48-202ENST00000409860 CTXND1A0A1B0GTU2 59 aa15.41■□□□□ 0.06
C4orf48-202ENST00000409860 CD7P09564 240 aa15.41■□□□□ 0.06
C4orf48-202ENST00000409860 PYYP10082 97 aa15.41■□□□□ 0.06
C4orf48-202ENST00000409860 HIST1H1EP10412 219 aaKnown RBP15.41■□□□□ 0.06
C4orf48-202ENST00000409860 SNRPD3P62318 126 aaKnown RBP15.41■□□□□ 0.06
C4orf48-202ENST00000409860 GUK1Q16774 197 aa15.41■□□□□ 0.06
C4orf48-202ENST00000409860 LCN15Q6UWW0 184 aa15.41■□□□□ 0.06
C4orf48-202ENST00000409860 PQLC2Q6ZP29 291 aa15.41■□□□□ 0.06
C4orf48-202ENST00000409860 LRRC20Q8TCA0 184 aa15.41■□□□□ 0.06
C4orf48-202ENST00000409860 C16orf92Q96LL3 132 aa15.41■□□□□ 0.06
C4orf48-202ENST00000409860 AURKAIP1Q9NWT8 199 aaPredicted RBP15.41■□□□□ 0.06
C4orf48-202ENST00000409860 ISLRO14498 428 aa15.4■□□□□ 0.06
C4orf48-202ENST00000409860 SOCS3O14543 225 aa15.4■□□□□ 0.06
C4orf48-202ENST00000409860 EIF3GO75821 320 aaKnown RBP eCLIP15.4■□□□□ 0.06
C4orf48-202ENST00000409860 PSMB3P49720 205 aa15.4■□□□□ 0.06
C4orf48-202ENST00000409860 UBE2L3P68036 154 aaKnown RBP15.4■□□□□ 0.06
C4orf48-202ENST00000409860 DPPA3Q6W0C5 159 aa15.4■□□□□ 0.06
C4orf48-202ENST00000409860 PHYHIPLQ96FC7 376 aa15.4■□□□□ 0.06
C4orf48-202ENST00000409860 C17orf77Q96MU5 243 aa15.4■□□□□ 0.06
C4orf48-202ENST00000409860 NOTCH1P46531 2555 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 OR11H12B2RN74 326 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 H3BQ15 152 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms