RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 WFDC1Q9HC57 220 aa16.52■□□□□ 0.24
PTCD3-203ENST00000409783 SLC39A9Q9NUM3 307 aa16.52■□□□□ 0.24
PTCD3-203ENST00000409783 PXMP4Q9Y6I8 212 aa16.52■□□□□ 0.24
PTCD3-203ENST00000409783 B2MP61769 119 aa16.51■□□□□ 0.23
PTCD3-203ENST00000409783 MORN5Q5VZ52 161 aa16.51■□□□□ 0.23
PTCD3-203ENST00000409783 LINC00305Q7Z4B0 112 aa16.51■□□□□ 0.23
PTCD3-203ENST00000409783 SMIM3Q9BZL3 60 aa16.51■□□□□ 0.23
PTCD3-203ENST00000409783 ELOA3CA0A087WX78 387 aaPredicted RBP16.5■□□□□ 0.23
PTCD3-203ENST00000409783 MRPS12O15235 138 aaKnown RBP16.5■□□□□ 0.23
PTCD3-203ENST00000409783 COX7A2P2O60397 106 aa16.5■□□□□ 0.23
PTCD3-203ENST00000409783 GALR1P47211 349 aa16.5■□□□□ 0.23
PTCD3-203ENST00000409783 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.5■□□□□ 0.23
PTCD3-203ENST00000409783 Q6ZRG5 221 aa16.5■□□□□ 0.23
PTCD3-203ENST00000409783 OR2T35Q8NGX2 323 aa16.5■□□□□ 0.23
PTCD3-203ENST00000409783 AQP10Q96PS8 301 aa16.5■□□□□ 0.23
PTCD3-203ENST00000409783 RSG1Q9BU20 258 aa16.5■□□□□ 0.23
PTCD3-203ENST00000409783 DNAJC4Q9NNZ3 241 aa16.5■□□□□ 0.23
PTCD3-203ENST00000409783 C10orf113Q5VZT2 155 aa16.49■□□□□ 0.23
PTCD3-203ENST00000409783 NBEAL2Q6ZNJ1 2754 aa16.49■□□□□ 0.23
PTCD3-203ENST00000409783 S100A7AQ86SG5 101 aa16.49■□□□□ 0.23
PTCD3-203ENST00000409783 U3KQK5 164 aa16.49■□□□□ 0.23
PTCD3-203ENST00000409783 RPL35AP18077 110 aaKnown RBP16.48■□□□□ 0.23
PTCD3-203ENST00000409783 RPL7P18124 248 aaKnown RBP16.48■□□□□ 0.23
PTCD3-203ENST00000409783 PSMG4Q5JS54 123 aa16.48■□□□□ 0.23
PTCD3-203ENST00000409783 SNRPD3P62318 126 aaKnown RBP16.47■□□□□ 0.23
PTCD3-203ENST00000409783 GCSAMLQ5JQS6 135 aa16.47■□□□□ 0.23
PTCD3-203ENST00000409783 OR1L4Q8NGR5 311 aa16.47■□□□□ 0.23
PTCD3-203ENST00000409783 RCHY1Q96PM5 261 aa16.47■□□□□ 0.23
PTCD3-203ENST00000409783 PFDN5Q99471 154 aa16.47■□□□□ 0.23
PTCD3-203ENST00000409783 SPATA25Q9BR10 227 aa16.47■□□□□ 0.23
PTCD3-203ENST00000409783 PARD6GQ9BYG4 376 aaPredicted RBP16.47■□□□□ 0.23
PTCD3-203ENST00000409783 ZMAT4Q9H898 229 aa16.47■□□□□ 0.23
PTCD3-203ENST00000409783 STAB2Q8WWQ8 2551 aa16.47■□□□□ 0.23
PTCD3-203ENST00000409783 KIR2DL5BA0A0G2JN68 375 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 KIR2DL5BA0A0G2JPC4 375 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 RNF222A6NCQ9 220 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 KNCNA6PVL3 124 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 ISLRO14498 428 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 PSMB3P49720 205 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 MEOX2P50222 304 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 KIR2DL5AQ8N109 375 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 KIR2DL5BQ8NHK3 375 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 GATAD1Q8WUU5 269 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 RETNQ9HD89 108 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 TNFSF18Q9UNG2 199 aa16.46■□□□□ 0.23
PTCD3-203ENST00000409783 A0A087X0K7 114 aa16.45■□□□□ 0.22
PTCD3-203ENST00000409783 Q6ZNX1 250 aa16.45■□□□□ 0.22
PTCD3-203ENST00000409783 TRPT1Q86TN4 253 aaKnown RBP16.45■□□□□ 0.22
PTCD3-203ENST00000409783 RNF24Q9Y225 148 aa16.45■□□□□ 0.22
PTCD3-203ENST00000409783 FXYD6-FXYD2A0A087WZ82 144 aa16.44■□□□□ 0.22
PTCD3-203ENST00000409783 TRAV8-2A0A0B4J237 113 aa16.44■□□□□ 0.22
PTCD3-203ENST00000409783 TRAV5A0A0B4J249 113 aa16.44■□□□□ 0.22
PTCD3-203ENST00000409783 IFNA5P01569 189 aa16.44■□□□□ 0.22
PTCD3-203ENST00000409783 ID1P41134 155 aa16.44■□□□□ 0.22
PTCD3-203ENST00000409783 APOC4P55056 127 aa16.44■□□□□ 0.22
PTCD3-203ENST00000409783 SAMD13Q5VXD3 122 aa16.44■□□□□ 0.22
PTCD3-203ENST00000409783 C20orf173Q96LM9 149 aa16.44■□□□□ 0.22
PTCD3-203ENST00000409783 ATF4P18848 351 aaPredicted RBP16.43■□□□□ 0.22
PTCD3-203ENST00000409783 DEFB1P60022 68 aa16.43■□□□□ 0.22
PTCD3-203ENST00000409783 ZNF709Q8N972 641 aa16.43■□□□□ 0.22
PTCD3-203ENST00000409783 C16orf92Q96LL3 132 aa16.43■□□□□ 0.22
PTCD3-203ENST00000409783 KCNIP2Q9NS61 270 aa16.43■□□□□ 0.22
PTCD3-203ENST00000409783 RFNGQ9Y644 331 aa16.43■□□□□ 0.22
PTCD3-203ENST00000409783 C17orf112F2Z3M2 114 aa16.42■□□□□ 0.22
PTCD3-203ENST00000409783 SMLR1H3BR10 107 aa16.42■□□□□ 0.22
PTCD3-203ENST00000409783 UBE2CO00762 179 aa16.42■□□□□ 0.22
PTCD3-203ENST00000409783 ACTL10Q5JWF8 245 aa16.42■□□□□ 0.22
PTCD3-203ENST00000409783 BPIFA4PQ86YQ2 179 aa16.42■□□□□ 0.22
PTCD3-203ENST00000409783 STHQ8IWL8 128 aa16.42■□□□□ 0.22
PTCD3-203ENST00000409783 SCGB1C1Q8TD33 95 aa16.42■□□□□ 0.22
PTCD3-203ENST00000409783 LINC00052Q96N35 136 aa16.42■□□□□ 0.22
PTCD3-203ENST00000409783 CSTL1Q9H114 145 aa16.42■□□□□ 0.22
PTCD3-203ENST00000409783 IGLC2P0DOY2 106 aa16.41■□□□□ 0.22
PTCD3-203ENST00000409783 GDF5OSQ5U4N7 250 aa16.41■□□□□ 0.22
PTCD3-203ENST00000409783 IGFL4Q6B9Z1 124 aa16.41■□□□□ 0.22
PTCD3-203ENST00000409783 Q6ZWC4 215 aa16.41■□□□□ 0.22
PTCD3-203ENST00000409783 INO80EQ8NBZ0 244 aaPredicted RBP16.41■□□□□ 0.22
PTCD3-203ENST00000409783 OVOL2Q9BRP0 275 aa16.41■□□□□ 0.22
PTCD3-203ENST00000409783 H3BMM0 161 aa16.4■□□□□ 0.22
PTCD3-203ENST00000409783 GIG44P09565 113 aaPredicted RBP16.4■□□□□ 0.22
PTCD3-203ENST00000409783 SPATA31B1PQ5VZV4 182 aa16.4■□□□□ 0.22
PTCD3-203ENST00000409783 H3BQ15 152 aa16.39■□□□□ 0.21
PTCD3-203ENST00000409783 SNRPCP09234 159 aaKnown RBP16.39■□□□□ 0.21
PTCD3-203ENST00000409783 HLA-DRB4P13762 266 aa16.39■□□□□ 0.21
PTCD3-203ENST00000409783 FAM78BQ5VT40 261 aa16.39■□□□□ 0.21
PTCD3-203ENST00000409783 FOXI2Q6ZQN5 318 aa16.39■□□□□ 0.21
PTCD3-203ENST00000409783 FAM167A-AS1Q96KT0 104 aa16.39■□□□□ 0.21
PTCD3-203ENST00000409783 SAV1Q9H4B6 383 aaPredicted RBP16.39■□□□□ 0.21
PTCD3-203ENST00000409783 HLA-DRB4X5D2U9 266 aa16.39■□□□□ 0.21
PTCD3-203ENST00000409783 ZNF266Q14584 549 aa16.38■□□□□ 0.21
PTCD3-203ENST00000409783 DEFB135Q30KP9 77 aa16.38■□□□□ 0.21
PTCD3-203ENST00000409783 FFAR4Q5NUL3 377 aa16.38■□□□□ 0.21
PTCD3-203ENST00000409783 MIR17HGQ75NE6 70 aa16.38■□□□□ 0.21
PTCD3-203ENST00000409783 RNF182Q8N6D2 247 aa16.38■□□□□ 0.21
PTCD3-203ENST00000409783 SAT2Q96F10 170 aaPredicted RBP16.38■□□□□ 0.21
PTCD3-203ENST00000409783 HRH4Q9H3N8 390 aa16.38■□□□□ 0.21
PTCD3-203ENST00000409783 TMEM14CQ9P0S9 112 aa16.38■□□□□ 0.21
PTCD3-203ENST00000409783 TP53TG1Q9Y2A0 90 aa16.38■□□□□ 0.21
PTCD3-203ENST00000409783 TIMM9Q9Y5J7 89 aa16.38■□□□□ 0.21
PTCD3-203ENST00000409783 F6UB75 175 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms