RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 C17orf77Q96MU5 243 aa16.14■□□□□ 0.17
USP39-203ENST00000409470 CLEC3BP05452 202 aa16.14■□□□□ 0.17
USP39-203ENST00000409470 KRTAP10-9P60411 292 aa16.14■□□□□ 0.17
USP39-203ENST00000409470 RABAC1Q9UI14 185 aa16.14■□□□□ 0.17
USP39-203ENST00000409470 TRAPPC1Q9Y5R8 145 aa16.14■□□□□ 0.17
USP39-203ENST00000409470 ANKRD17O75179 2603 aaKnown RBP16.13■□□□□ 0.17
USP39-203ENST00000409470 IGHV3-35A0A0C4DH35 117 aa16.13■□□□□ 0.17
USP39-203ENST00000409470 ZNF705GA8MUZ8 300 aaPredicted RBP16.13■□□□□ 0.17
USP39-203ENST00000409470 S100A8P05109 93 aa16.13■□□□□ 0.17
USP39-203ENST00000409470 CDX1P47902 265 aaPredicted RBP16.13■□□□□ 0.17
USP39-203ENST00000409470 OR8I2Q8N0Y5 310 aa16.13■□□□□ 0.17
USP39-203ENST00000409470 EEF1AKMT3Q96AZ1 226 aa16.13■□□□□ 0.17
USP39-203ENST00000409470 GNB4Q9HAV0 340 aa16.13■□□□□ 0.17
USP39-203ENST00000409470 GAR1Q9NY12 217 aaKnown RBP16.13■□□□□ 0.17
USP39-203ENST00000409470 LINC00527Q9UJ94 153 aa16.13■□□□□ 0.17
USP39-203ENST00000409470 MAP1AP78559 2803 aaPredicted RBP16.13■□□□□ 0.17
USP39-203ENST00000409470 A6NDX4 124 aa16.12■□□□□ 0.17
USP39-203ENST00000409470 MRPS12O15235 138 aaKnown RBP16.12■□□□□ 0.17
USP39-203ENST00000409470 PRR27Q6MZM9 219 aa16.12■□□□□ 0.17
USP39-203ENST00000409470 GPR82Q96P67 336 aa16.12■□□□□ 0.17
USP39-203ENST00000409470 CELSR2Q9HCU4 2923 aa16.12■□□□□ 0.17
USP39-203ENST00000409470 A0A096LNT2 108 aa16.12■□□□□ 0.17
USP39-203ENST00000409470 RPL15P61313 204 aaKnown RBP16.12■□□□□ 0.17
USP39-203ENST00000409470 MAPK1IP1LQ8NDC0 245 aa16.12■□□□□ 0.17
USP39-203ENST00000409470 BMPR1BO00238 502 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 CLEC19AQ6UXS0 136 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 SMIM12Q96EX1 92 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 ZNF414Q96IQ9 312 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 PITPNC1Q9UKF7 332 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.11■□□□□ 0.172e-7■■■■■ 31.3
USP39-203ENST00000409470 S100A7P31151 101 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 ATP5G2Q06055 141 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 FAM231DQ6ZW35 169 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 LYPD1Q8N2G4 141 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 CCDC140Q96MF4 163 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 C12orf57Q99622 126 aa16.11■□□□□ 0.17
USP39-203ENST00000409470 FBN2P35556 2912 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 IGHV3OR16-8A0A075B7F1 116 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 TRBV7-1A0A0A6YYK4 115 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 M0QZK8 103 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 GATCO43716 136 aaKnown RBP16.1■□□□□ 0.17
USP39-203ENST00000409470 TGFAP01135 160 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 MEOX2P50222 304 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 CRIP2P52943 208 aaPredicted RBP16.1■□□□□ 0.17
USP39-203ENST00000409470 TCL1AP56279 114 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 GFI1BQ5VTD9 330 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 SIGLEC15Q6ZMC9 328 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 GOLT1AQ6ZVE7 132 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 TMEM190Q8WZ59 177 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 CELSR1Q9NYQ6 3014 aa16.1■□□□□ 0.17
USP39-203ENST00000409470 RNF223E7ERA6 249 aa16.09■□□□□ 0.17
USP39-203ENST00000409470 RPL7P18124 248 aaKnown RBP16.09■□□□□ 0.17
USP39-203ENST00000409470 RPL19P84098 196 aaKnown RBP16.09■□□□□ 0.17
USP39-203ENST00000409470 C19orf54Q5BKX5 351 aa16.09■□□□□ 0.17
USP39-203ENST00000409470 PDZD11Q5EBL8 140 aa16.09■□□□□ 0.17
USP39-203ENST00000409470 TOMM20LQ6UXN7 152 aa16.09■□□□□ 0.17
USP39-203ENST00000409470 LTAP01374 205 aa16.09■□□□□ 0.17
USP39-203ENST00000409470 NUDT10Q8NFP7 164 aa16.09■□□□□ 0.17
USP39-203ENST00000409470 NUDT11Q96G61 164 aa16.09■□□□□ 0.17
USP39-203ENST00000409470 BEX4Q9NWD9 120 aaPredicted RBP16.09■□□□□ 0.17
USP39-203ENST00000409470 CSMD2Q7Z408 3487 aa16.09■□□□□ 0.17
USP39-203ENST00000409470 XKRY2A2RUG3 117 aa16.08■□□□□ 0.16
USP39-203ENST00000409470 J3QLI3 93 aa16.08■□□□□ 0.16
USP39-203ENST00000409470 CA1P00915 261 aaPredicted RBP16.08■□□□□ 0.16
USP39-203ENST00000409470 PDE6HQ13956 83 aa16.08■□□□□ 0.16
USP39-203ENST00000409470 DEFB113Q30KQ7 82 aa16.08■□□□□ 0.16
USP39-203ENST00000409470 POLQO75417 2590 aa16.08■□□□□ 0.16
USP39-203ENST00000409470 TRAV8-1A0A0A6YYK1 113 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 SMIM27A0A1W2PRY6 76 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 SPINK4O60575 86 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 TRGV3P03979 118 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 IGF1P05019 195 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 LOXL1Q08397 574 aaPredicted RBP16.07■□□□□ 0.16
USP39-203ENST00000409470 HIST3H2BBQ8N257 126 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 MLST8Q9BVC4 326 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 AAMDCQ9H7C9 122 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 ZFHX3Q15911 3703 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 FAM223BA6NKX1 122 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 IFITM10A6NMD0 228 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 IGHG2P01859 326 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 CBLN1P23435 193 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 S100A2P29034 98 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 IER3P46695 156 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 PRNTQ86SH4 94 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 Q86TA4 180 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 FAM223AQ8IWN6 122 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 GPR61Q9BZJ8 451 aa16.07■□□□□ 0.16
USP39-203ENST00000409470 K7EQM0 130 aa16.06■□□□□ 0.16
USP39-203ENST00000409470 SLC35B1P78383 322 aa16.06■□□□□ 0.16
USP39-203ENST00000409470 GRAMD2BQ96HH9 432 aa16.06■□□□□ 0.16
USP39-203ENST00000409470 ZFAND3Q9H8U3 227 aa16.06■□□□□ 0.16
USP39-203ENST00000409470 CENPEQ02224 2701 aa16.06■□□□□ 0.16
USP39-203ENST00000409470 BLCAPP62952 87 aa16.06■□□□□ 0.16
USP39-203ENST00000409470 SMIM6P0DI80 62 aa16.05■□□□□ 0.16
USP39-203ENST00000409470 PSG9Q00887 426 aa16.05■□□□□ 0.16
USP39-203ENST00000409470 Q5PR19 223 aa16.05■□□□□ 0.16
USP39-203ENST00000409470 NOL4LQ96MY1 436 aaPredicted RBP16.05■□□□□ 0.16
USP39-203ENST00000409470 PTPN13Q12923 2485 aa16.05■□□□□ 0.16
USP39-203ENST00000409470 IGLV2-11P01706 119 aa16.04■□□□□ 0.16
USP39-203ENST00000409470 TPPP2P59282 170 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms