RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 FAM229AH3BQW9 127 aa11.45□□□□□ -0.58
CHMP3-203ENST00000409225 APOA1P02647 267 aa11.45□□□□□ -0.58
CHMP3-203ENST00000409225 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-203ENST00000409225 RHOBP62745 196 aa11.45□□□□□ -0.58
CHMP3-203ENST00000409225 HAMPP81172 84 aa11.45□□□□□ -0.58
CHMP3-203ENST00000409225 ZNF738Q8NE65 137 aa11.45□□□□□ -0.58
CHMP3-203ENST00000409225 DTD1Q8TEA8 209 aa11.45□□□□□ -0.58
CHMP3-203ENST00000409225 NAA60Q9H7X0 242 aa11.45□□□□□ -0.58
CHMP3-203ENST00000409225 PPP1R14DQ9NXH3 145 aa11.45□□□□□ -0.58
CHMP3-203ENST00000409225 ZNF98A6NK75 572 aa11.44□□□□□ -0.58
CHMP3-203ENST00000409225 DNAH10OSP0CZ25 163 aa11.44□□□□□ -0.58
CHMP3-203ENST00000409225 SULT1A3P0DMM9 295 aa11.44□□□□□ -0.58
CHMP3-203ENST00000409225 SULT1A4P0DMN0 295 aa11.44□□□□□ -0.58
CHMP3-203ENST00000409225 HIST1H1AQ02539 215 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-203ENST00000409225 FGL1Q08830 312 aa11.44□□□□□ -0.58
CHMP3-203ENST00000409225 Q6ZSN1 163 aa11.44□□□□□ -0.58
CHMP3-203ENST00000409225 RNASE8Q8TDE3 154 aaKnown RBP11.44□□□□□ -0.58
CHMP3-203ENST00000409225 TMEM263Q8WUH6 116 aaKnown RBP11.44□□□□□ -0.58
CHMP3-203ENST00000409225 TRGV9Q99603 122 aa11.44□□□□□ -0.58
CHMP3-203ENST00000409225 RBKSQ9H477 322 aa11.44□□□□□ -0.58
CHMP3-203ENST00000409225 C14orf166Q9Y224 244 aaKnown RBP11.44□□□□□ -0.58
CHMP3-203ENST00000409225 GAGE12BA1L429 117 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 ADAP1O75689 374 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 GAGE7O76087 117 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 GAGE12FP0CL80 117 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 GAGE12GP0CL81 117 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 GAGE12IP0CL82 117 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 PRB4P10163 310 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-203ENST00000409225 ZNF493Q6ZR52 646 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 OR1B1Q8NGR6 318 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 OR52I2Q8NH67 350 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 TNFRSF18Q9Y5U5 241 aa11.43□□□□□ -0.58
CHMP3-203ENST00000409225 HMCN2Q8NDA2 5059 aa11.42□□□□□ -0.58
CHMP3-203ENST00000409225 HPGDSO60760 199 aa11.42□□□□□ -0.58
CHMP3-203ENST00000409225 TBPP20226 339 aa11.42□□□□□ -0.58
CHMP3-203ENST00000409225 LINC00612Q8N6U2 182 aa11.42□□□□□ -0.58
CHMP3-203ENST00000409225 RTBDNQ9BSG5 229 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-203ENST00000409225 HSPB7Q9UBY9 170 aa11.42□□□□□ -0.58
CHMP3-203ENST00000409225 CACFD1Q9UGQ2 172 aa11.42□□□□□ -0.58
CHMP3-203ENST00000409225 IGKV1OR2-108A0A075B7D4 117 aa11.41□□□□□ -0.58
CHMP3-203ENST00000409225 H3BNG1 76 aa11.41□□□□□ -0.58
CHMP3-203ENST00000409225 SIVA1O15304 175 aa11.41□□□□□ -0.58
CHMP3-203ENST00000409225 OR8A1Q8NGG7 326 aa11.41□□□□□ -0.58
CHMP3-203ENST00000409225 PRR13Q9NZ81 148 aa11.41□□□□□ -0.58
CHMP3-203ENST00000409225 A0A087WTM6 91 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 FAM25AB3EWG3 89 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 FAM25CB3EWG5 89 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 FAM25GB3EWG6 89 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 RAB3DO95716 219 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 RLN2P04090 185 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 ORM2P19652 201 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 GGNBP1Q5YKI7 109 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 THAP8Q8NA92 274 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 OR4D5Q8NGN0 318 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 GPR82Q96P67 336 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 MTFP1Q9UDX5 166 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 SLC45A2Q9UMX9 530 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 TMEM56-RWDD3S4R434 201 aa11.4□□□□□ -0.58
CHMP3-203ENST00000409225 A0A096LPF7 62 aa11.39□□□□□ -0.59
CHMP3-203ENST00000409225 CRYM-AS1A6NIL9 109 aa11.39□□□□□ -0.59
CHMP3-203ENST00000409225 H7BYZ3 331 aa11.39□□□□□ -0.59
CHMP3-203ENST00000409225 CFDP00746 253 aaPredicted RBP11.39□□□□□ -0.59
CHMP3-203ENST00000409225 GCSHP23434 173 aa11.39□□□□□ -0.59
CHMP3-203ENST00000409225 GATA2P23769 480 aaPredicted RBP11.39□□□□□ -0.59
CHMP3-203ENST00000409225 GPR107Q5VW38 600 aa11.39□□□□□ -0.59
CHMP3-203ENST00000409225 FAAP20Q6NZ36 180 aa11.39□□□□□ -0.59
CHMP3-203ENST00000409225 TMEM147Q9BVK8 224 aa11.39□□□□□ -0.59
CHMP3-203ENST00000409225 TMPRSS5Q9H3S3 457 aa11.39□□□□□ -0.59
CHMP3-203ENST00000409225 PAIP2BQ9ULR5 123 aaKnown RBP11.39□□□□□ -0.59
CHMP3-203ENST00000409225 NXPH4O95158 308 aa11.38□□□□□ -0.59
CHMP3-203ENST00000409225 CDKN1BP46527 198 aa11.38□□□□□ -0.59
CHMP3-203ENST00000409225 CCR6P51684 374 aa11.38□□□□□ -0.59
CHMP3-203ENST00000409225 ATP5IP56385 69 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-203ENST00000409225 TAS2R19P59542 299 aa11.38□□□□□ -0.59
CHMP3-203ENST00000409225 SMCO1Q147U7 214 aa11.38□□□□□ -0.59
CHMP3-203ENST00000409225 CCDC28AQ8IWP9 274 aa11.38□□□□□ -0.59
CHMP3-203ENST00000409225 TMEM229BQ8NBD8 167 aa11.38□□□□□ -0.59
CHMP3-203ENST00000409225 VSIG2Q96IQ7 327 aa11.38□□□□□ -0.59
CHMP3-203ENST00000409225 Q9H521 79 aa11.38□□□□□ -0.59
CHMP3-203ENST00000409225 SNURFLB1AK76 121 aa11.37□□□□□ -0.59
CHMP3-203ENST00000409225 RAB11AP62491 216 aa11.37□□□□□ -0.59
CHMP3-203ENST00000409225 KIR3DS1Q14943 382 aa11.37□□□□□ -0.59
CHMP3-203ENST00000409225 STEAP1BQ6NZ63 245 aa11.37□□□□□ -0.59
CHMP3-203ENST00000409225 TMEM182Q6ZP80 229 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-203ENST00000409225 NFE4Q86UQ8 179 aa11.37□□□□□ -0.59
CHMP3-203ENST00000409225 BPIFCQ8NFQ6 507 aa11.37□□□□□ -0.59
CHMP3-203ENST00000409225 YIPF6Q96EC8 236 aa11.37□□□□□ -0.59
CHMP3-203ENST00000409225 IAPPP10997 89 aa11.36□□□□□ -0.59
CHMP3-203ENST00000409225 CXCL3P19876 107 aa11.36□□□□□ -0.59
CHMP3-203ENST00000409225 PSG3Q16557 428 aa11.36□□□□□ -0.59
CHMP3-203ENST00000409225 TMED4Q7Z7H5 227 aa11.36□□□□□ -0.59
CHMP3-203ENST00000409225 OR1S1Q8NH92 325 aa11.36□□□□□ -0.59
CHMP3-203ENST00000409225 IL22RA2Q969J5 263 aa11.36□□□□□ -0.59
CHMP3-203ENST00000409225 DNAH8Q96JB1 4490 aa11.36□□□□□ -0.59
CHMP3-203ENST00000409225 H3BRN7 92 aa11.35□□□□□ -0.59
CHMP3-203ENST00000409225 S100A7P31151 101 aa11.35□□□□□ -0.59
CHMP3-203ENST00000409225 SURF2Q15527 256 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-203ENST00000409225 LYZL2Q7Z4W2 148 aa11.35□□□□□ -0.59
CHMP3-203ENST00000409225 LRRC20Q8TCA0 184 aa11.35□□□□□ -0.59
CHMP3-203ENST00000409225 PARD6GQ9BYG4 376 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms