RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 LPAR6P43657 344 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 UBE2KP61086 200 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 HLA-DRB3P79483 266 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 PMVKQ15126 192 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR8G1Q15617 311 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 NMSQ5H8A3 153 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 MRPL52Q86TS9 123 aaKnown RBP2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF695Q8IW36 515 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 C1orf174Q8IYL3 243 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 SLC25A29Q8N8R3 303 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 ORAOV1Q8WV07 137 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 SPIN2AQ99865 258 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 SPIN2BQ9BPZ2 258 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 GINS3Q9BRX5 216 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 ADAT1Q9BUB4 502 aaKnown RBP2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 MRPL20Q9BYC9 149 aaKnown RBP2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 SMIM3Q9BZL3 60 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 BCL2L14Q9BZR8 327 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 PLEKHF2Q9H8W4 249 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 WFDC1Q9HC57 220 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 C21orf62Q9NYP8 219 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 TRAPPC2LQ9UL33 140 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 CBY1Q9Y3M2 126 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 SDK1Q7Z5N4 2213 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 FREM3P0C091 2139 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGKV2-28A0A075B6P5 120 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGHV1-3A0A0C4DH29 117 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGHV1-18A0A0C4DH31 117 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 TMEM30CPA0ZSE6 113 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 FAM24AA6NFZ4 105 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 A8MWL6 223 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 PITX3O75364 302 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF324O75467 553 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 HAND1O96004 215 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGKV2D-28P01615 120 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 CD5P06127 495 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 MUC1P15941 1255 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 IL3RAP26951 378 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 RAB5CP51148 216 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 AKR1C2P52895 323 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 POLR2GP62487 172 aaKnown RBP eCLIP2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 DEFA5Q01523 94 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 AKR1C1Q04828 323 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 HMGN3Q15651 99 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 BSXQ3C1V8 233 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 COX19Q49B96 90 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 LINC00483Q53H64 154 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 C10orf91Q5T1B1 145 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 Q6ZS92 163 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 ORMDL3Q8N138 153 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 SVBPQ8N300 66 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR2Z1Q8NG97 314 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 CIRBP-AS1Q8TBR5 109 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 LSM10Q969L4 123 aaKnown RBP2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 S100PBPQ96BU1 408 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 GPR146Q96CH1 333 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 RBMXL1Q96E39 390 aaKnown RBP2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 RNF5Q99942 180 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 SLC25A31Q9H0C2 315 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 TLNRD1Q9H1K6 362 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 PARP11Q9NR21 331 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 LYRM2Q9NU23 88 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 UQCC1Q9NVA1 299 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 TAAR3PQ9P1P4 343 aa2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 CARHSP1Q9Y2V2 147 aaKnown RBP2.93□□□□□ -1.94
HMGB3P18-201ENST00000406327 A0A0C4DFX4 3053 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 ASCC3Q8N3C0 2202 aaKnown RBP2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGSF23A1L1A6 192 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 C9JQL5 133 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 F8W036 122 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 K7EM74 188 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 CRXO43186 299 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 SSSCA1O60232 199 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGKV1-39P01597 117 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGKV1D-39P04432 117 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 ADCYAP1P18509 176 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 SNCAP37840 140 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 CD200P41217 278 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 BAXQ07812 192 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF816Q0VGE8 651 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 EBI3Q14213 229 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 MSMO1Q15800 293 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 PRSS8Q16651 343 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 TIMM23BQ5SRD1 257 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF826PQ6ZT77 177 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 SSX7Q7RTT5 188 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZCCHC24Q8N2G6 241 aaKnown RBP2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 NECAP1Q8NC96 275 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR51H1Q8NH63 302 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 GALMQ96C23 342 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 SCRT1Q9BWW7 348 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 SEC11CQ9BY50 192 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 NKX6-2Q9C056 277 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 SIRT7Q9NRC8 400 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 C19orf12Q9NSK7 152 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 CACFD1Q9UGQ2 172 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 RBM7Q9Y580 266 aaKnown RBP2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 FAM215AQ9Y5M1 114 aa2.92□□□□□ -1.94
HMGB3P18-201ENST00000406327 MPDZO75970 2070 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms