RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 HRH4Q9H3N8 390 aa7.85□□□□□ -1.15
NUP98-205ENST00000397007 WNK1Q9H4A3 2382 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 UHRF2Q96PU4 802 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 FUT9Q9Y231 359 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 HIGD1AQ9Y241 93 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 H3BQ15 152 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 STAG3L2P0CL84 134 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 STAG3L3P0CL85 134 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 LINC00305Q7Z4B0 112 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 PFDN5Q99471 154 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 ZNF586Q9NXT0 402 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 ZNF207O43670 478 aaKnown RBP7.84□□□□□ -1.15
NUP98-205ENST00000397007 SIGLEC15Q6ZMC9 328 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 ARL6IP6Q8N6S5 226 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 INO80EQ8NBZ0 244 aaPredicted RBP7.84□□□□□ -1.15
NUP98-205ENST00000397007 KCNIP2Q9NS61 270 aa7.84□□□□□ -1.15
NUP98-205ENST00000397007 A0A1W2PS18 150 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 OR1L4Q8NGR5 311 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 MBD3L1Q8WWY6 194 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 MAP6D1Q9H9H5 199 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 M6PRP20645 277 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 DPPA3Q6W0C5 159 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 TCF24Q7RTU0 167 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 SMIM3Q9BZL3 60 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 PPP1R14DQ9NXH3 145 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 TRAV5A0A0B4J249 113 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 PSMB3P49720 205 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 LYZP61626 148 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 PDE6HQ13956 83 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 MIR17HGQ75NE6 70 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 GNPNAT1Q96EK6 184 aaPredicted RBP7.83□□□□□ -1.16
NUP98-205ENST00000397007 ARL6Q9H0F7 186 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 NRN1Q9NPD7 142 aa7.83□□□□□ -1.16
NUP98-205ENST00000397007 ZNF331Q9NQX6 463 aaPredicted RBP7.83□□□□□ -1.16
NUP98-205ENST00000397007 TRAV1-1A0A0B4J248 108 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 SLC17A3O00476 420 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 RAB2AP61019 212 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 TMEM41BQ5BJD5 291 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 C10orf113Q5VZT2 155 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 MRPL53Q96EL3 112 aaKnown RBP7.82□□□□□ -1.16
NUP98-205ENST00000397007 TMEM231Q9H6L2 316 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 RPRMQ9NS64 109 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 TRBV19A0A075B6N1 114 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 C17orf112F2Z3M2 114 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 AMTNQ6UX39 209 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 PPP1R14BQ96C90 147 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 PHYHIPLQ96FC7 376 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 hCG_2014768A0A024R1R8 64 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 RBMY1BA6NDE4 496 aaKnown RBP7.82□□□□□ -1.16
NUP98-205ENST00000397007 RBMY1EA6NEQ0 496 aaKnown RBP7.82□□□□□ -1.16
NUP98-205ENST00000397007 RBMY1DP0C7P1 496 aaKnown RBP7.82□□□□□ -1.16
NUP98-205ENST00000397007 MEOX2P50222 304 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 APRG1Q8IVJ8 170 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 CCDC28AQ8IWP9 274 aa7.82□□□□□ -1.16
NUP98-205ENST00000397007 PLECQ15149 4684 aaKnown RBP7.82□□□□□ -1.16
NUP98-205ENST00000397007 ZNF320A2RRD8 509 aa7.81□□□□□ -1.16
NUP98-205ENST00000397007 HELTA6NFD8 242 aa7.81□□□□□ -1.16
NUP98-205ENST00000397007 CSNK1G2-AS1Q8NCQ2 148 aa7.81□□□□□ -1.16
NUP98-205ENST00000397007 CD7P09564 240 aa7.81□□□□□ -1.16
NUP98-205ENST00000397007 FFAR4Q5NUL3 377 aa7.81□□□□□ -1.16
NUP98-205ENST00000397007 LEMD1Q68G75 181 aa7.81□□□□□ -1.16
NUP98-205ENST00000397007 ARL2-SNX15V9GYD0 113 aa7.81□□□□□ -1.16
NUP98-205ENST00000397007 SMCO3A2RU48 225 aa7.81□□□□□ -1.16
NUP98-205ENST00000397007 AP2S1P53680 142 aaPredicted RBP7.81□□□□□ -1.16
NUP98-205ENST00000397007 TRPT1Q86TN4 253 aaKnown RBP7.81□□□□□ -1.16
NUP98-205ENST00000397007 ZMAT5Q9UDW3 170 aaKnown RBP7.81□□□□□ -1.16
NUP98-205ENST00000397007 MGAM2Q2M2H8 2515 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 SULT1A2P50226 295 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 RAB31Q13636 194 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 SLC51BQ86UW2 128 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 BAP18Q8IXM2 172 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 ZNF709Q8N972 641 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 C20orf24Q9BUV8 137 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 ISLRO14498 428 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 NDUFS6O75380 124 aaKnown RBP7.8□□□□□ -1.16
NUP98-205ENST00000397007 ORM2P19652 201 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 BMI1P35226 326 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 GUK1Q16774 197 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 SAMD13Q5VXD3 122 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 SAV1Q9H4B6 383 aaPredicted RBP7.8□□□□□ -1.16
NUP98-205ENST00000397007 PAIP2BQ9ULR5 123 aaKnown RBP7.8□□□□□ -1.16
NUP98-205ENST00000397007 RNF24Q9Y225 148 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 NOTCH3Q9UM47 2321 aa7.8□□□□□ -1.16
NUP98-205ENST00000397007 IGHV3-66A0A0C4DH42 116 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 IFNA5P01569 189 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 RPL7P18124 248 aaKnown RBP7.79□□□□□ -1.16
NUP98-205ENST00000397007 ZFP69Q49AA0 526 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 LYPD1Q8N2G4 141 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 TM2D3Q9BRN9 247 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 IGHV3-49A0A0A0MS15 119 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 MBP02144 154 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 COX7A2P2O60397 106 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 HIST1H1EP10412 219 aaKnown RBP7.79□□□□□ -1.16
NUP98-205ENST00000397007 Q6ZRG5 221 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 COX8CQ7Z4L0 72 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 DOK5Q9P104 306 aa7.79□□□□□ -1.16
NUP98-205ENST00000397007 ACOT6Q3I5F7 207 aaPredicted RBP7.78□□□□□ -1.16
NUP98-205ENST00000397007 PRR25Q96S07 402 aa7.78□□□□□ -1.16
NUP98-205ENST00000397007 TENM3Q9P273 2699 aa7.78□□□□□ -1.16
NUP98-205ENST00000397007 UMAD1C9J7I0 102 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms