RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 IGHV2-70DA0A0C4DH43 119 aa12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 STXBP6Q8NFX7 210 aa12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 GLMPQ8WWB7 406 aa12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 MRPL32Q9BYC8 188 aaKnown RBP12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 S100A8P05109 93 aa12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 TMEM256Q8N2U0 113 aa12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 PARD6GQ9BYG4 376 aaPredicted RBP12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 M0R1W7 72 aa12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 SRIP30626 198 aa12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 BORCS7Q96B45 105 aa12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 EPDR1Q9UM22 224 aa12.6□□□□□ -0.39
SMARCD1-202ENST00000394963 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 PRSS46E5RG02 174 aa12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 K7EN84 100 aa12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 GOSR1O95249 250 aa12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 CENPVQ7Z7K6 275 aaPredicted RBP12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 FAM19A2Q8N3H0 131 aa12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 TMEM18Q96B42 140 aa12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 C5orf52A6NGY3 159 aa12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 PPP1R14DQ9NXH3 145 aa12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 HLA-DMBP28068 263 aa12.59□□□□□ -0.39
SMARCD1-202ENST00000394963 HSBP1O75506 76 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 HLA-DRB1P01911 266 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 ADMP35318 185 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 C8orf46Q8TAG6 207 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 FLNAP21333 2647 aaKnown RBP12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 HIGD1CA8MV81 97 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 IGLC1P0CG04 106 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 ZNF562Q6V9R5 426 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 BLCAPP62952 87 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 SIGLECL1Q8N7X8 197 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 ZNF503Q96F45 646 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 TBX15Q96SF7 602 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 CHRDL1Q9BU40 450 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 PITPNC1Q9UKF7 332 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 CUBNO60494 3623 aa12.58□□□□□ -0.4
SMARCD1-202ENST00000394963 PFN1P07737 140 aaKnown RBP12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 CDX1P47902 265 aaPredicted RBP12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 LOC389332A0A1B0GUA5 103 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 A0A1W2PRE2 83 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 TEX22C9J3V5 150 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 S100A7AQ86SG5 101 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 C19orf24Q9BVV8 132 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 LINC00574Q9H8X3 128 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 ITPR3Q14573 2671 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 HAX1O00165 279 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 ATP5IP56385 69 aaPredicted RBP12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 IQCJQ1A5X6 159 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 CDPF1Q6NVV7 123 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 ATOH7Q8N100 152 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 RNF182Q8N6D2 247 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 IL36BQ9NZH7 164 aa12.57□□□□□ -0.4
SMARCD1-202ENST00000394963 SRP14P37108 136 aaKnown RBP12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 CENPVL3A0A0U1RRI6 287 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 IGKV1-17P01599 117 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 HIST1H1EP10412 219 aaKnown RBP12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 ATP5G2Q06055 141 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 DEFB104AQ8WTQ1 72 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 TXNDC17Q9BRA2 123 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 UBE2E1P51965 193 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 RELQ04864 619 aaPredicted RBP12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 C11orf71Q6IPW1 123 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 DTX2Q86UW9 622 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 NUDT10Q8NFP7 164 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 NUDT11Q96G61 164 aa12.56□□□□□ -0.4
SMARCD1-202ENST00000394963 NPIPB5A8MRT5 1133 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 M0QZ24 198 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 BMPR1BO00238 502 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 TNFRSF13BO14836 293 aaPredicted RBP12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 LMO4P61968 165 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 VN1R17PQ8TDU5 208 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 IGKV1D-37A0A075B6S9 117 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 APCSP02743 223 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 MAS1LP35410 378 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 C16orf92Q96LL3 132 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 TRGV9Q99603 122 aa12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 BEX4Q9NWD9 120 aaPredicted RBP12.55□□□□□ -0.4
SMARCD1-202ENST00000394963 K7EIM0 57 aa12.54□□□□□ -0.4
SMARCD1-202ENST00000394963 FAM71F2Q6NXP2 309 aa12.54□□□□□ -0.4
SMARCD1-202ENST00000394963 ZNF705AQ6ZN79 300 aaPredicted RBP12.54□□□□□ -0.4
SMARCD1-202ENST00000394963 OR11H6Q8NGC7 330 aa12.54□□□□□ -0.4
SMARCD1-202ENST00000394963 HOXA5P20719 270 aa12.54□□□□□ -0.4
SMARCD1-202ENST00000394963 IGHV7-81A0A0B4J1V7 117 aa12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 FXYD5Q96DB9 178 aa12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 GPR82Q96P67 336 aa12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 PAM16Q9Y3D7 125 aa12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 TRBV24-1A0A075B6N3 115 aa12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 MSMBP08118 114 aa12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 FAM167A-AS1Q96KT0 104 aa12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 ZNF586Q9NXT0 402 aa12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 TEP1Q99973 2627 aaKnown RBP12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 TSTD3H0UI37 97 aa12.53□□□□□ -0.4
SMARCD1-202ENST00000394963 PMCHL1Q16048 86 aa12.52□□□□□ -0.4
SMARCD1-202ENST00000394963 TMEM116Q8NCL8 245 aa12.52□□□□□ -0.4
SMARCD1-202ENST00000394963 NDFIP1Q9BT67 221 aa12.52□□□□□ -0.4
SMARCD1-202ENST00000394963 TRAV41A0A0B4J266 112 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms