RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 SPINK9Q5DT21 86 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 TMEM14EPQ6UXP3 125 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 CCDC190Q86UF4 302 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 FAM19A4Q96LR4 140 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 IGHV3-66A0A0C4DH42 116 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 NBDYA0A0U1RRE5 68 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 IGHV3-48P01763 117 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 PI3P19957 117 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 RPL11P62913 178 aaKnown RBP4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 VWC2Q2TAL6 325 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 CDPF1Q6NVV7 123 aa4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 RNASE11Q8TAA1 199 aaKnown RBP4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 MRPS16Q9Y3D3 137 aaKnown RBP4.37□□□□□ -1.71
SMARCAD1-203ENST00000394961 ADAP1O75689 374 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 VAMP1P23763 118 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 GUK1Q16774 197 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 CYP2G1PQ6ZSU1 146 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 C6orf223Q8N319 242 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 RNASE8Q8TDE3 154 aaKnown RBP4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 TMEM263Q8WUH6 116 aaKnown RBP4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 IGHV3OR16-13A0A075B7E8 117 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 IGHV3-74A0A0B4J1X5 117 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 SYNGR2O43760 224 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 IFNA10P01566 189 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 LSM3P62310 102 aaKnown RBP4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 DAZ2Q13117 558 aaKnown RBP4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 SPCS2Q15005 226 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 LYZL2Q7Z4W2 148 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 Q9H3A6 140 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 RYR1P21817 5038 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 ZNF90Q03938 601 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 SCGB2B2Q4G0G5 96 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 TMEM88Q6PEY1 159 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 NAA50Q9GZZ1 169 aaKnown RBP4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 C11orf1Q9H5F2 150 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 PPP1R14DQ9NXH3 145 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 XCL2Q9UBD3 114 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 YTHDF2Q9Y5A9 579 aaKnown RBP4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 V9GYH0 126 aa4.36□□□□□ -1.71
SMARCAD1-203ENST00000394961 ZFP92A6NM28 416 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 NPIPB6E9PJ23 425 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 DEFB4AO15263 64 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 DAD1P61803 113 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 PSG3Q16557 428 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 FAM78BQ5VT40 261 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 LCN15Q6UWW0 184 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 GSG1LQ6UXU4 331 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 IQCF2Q8IXL9 164 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 Q8N1X5 172 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 COQ8AQ8NI60 647 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 SLC25A39Q9BZJ4 359 aaPredicted RBP4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 PRELID1Q9Y255 219 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 PXMP4Q9Y6I8 212 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 VPS13BQ7Z7G8 4022 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 ATP5G1P05496 136 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 ATP5G3P48201 142 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 ANXA2RQ3ZCQ2 193 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 ARL6IP6Q8N6S5 226 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 ACY3Q96HD9 319 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 TMEM147Q9BVK8 224 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 TMEM14CQ9P0S9 112 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 IGKV3-7A0A075B6H7 116 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 H7BYZ3 331 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 ZNF546Q86UE3 836 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 SLC35B3Q9H1N7 401 aa4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 STRAPQ9Y3F4 350 aaKnown RBP4.35□□□□□ -1.71
SMARCAD1-203ENST00000394961 CTDSP2O14595 271 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 RNASE12Q5GAN4 147 aaKnown RBP4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 OR8A1Q8NGG7 326 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 RXFP4Q8TDU9 374 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 C16orf92Q96LL3 132 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 HIGD1AQ9Y241 93 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 IGLC2P0DOY2 106 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 TNFSF8P32971 234 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 CNN1P51911 297 aaKnown RBP4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 TIRAPP58753 221 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 OR8I2Q8N0Y5 310 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 DIRAS2Q96HU8 199 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 ZNF331Q9NQX6 463 aaPredicted RBP4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 HSPG2P98160 4391 aa4.34□□□□□ -1.71
SMARCAD1-203ENST00000394961 NDUFB6O95139 128 aa4.34□□□□□ -1.72
SMARCAD1-203ENST00000394961 LEPP41159 167 aa4.34□□□□□ -1.72
SMARCAD1-203ENST00000394961 LYZP61626 148 aa4.34□□□□□ -1.72
SMARCAD1-203ENST00000394961 PDE6HQ13956 83 aa4.34□□□□□ -1.72
SMARCAD1-203ENST00000394961 IL18Q14116 193 aa4.34□□□□□ -1.72
SMARCAD1-203ENST00000394961 ZNF680Q8NEM1 530 aa4.34□□□□□ -1.72
SMARCAD1-203ENST00000394961 MAGT1Q9H0U3 335 aa4.34□□□□□ -1.72
SMARCAD1-203ENST00000394961 NPVFQ9HCQ7 196 aa4.34□□□□□ -1.72
SMARCAD1-203ENST00000394961 HYPMO75409 117 aa4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 CRISP2P16562 243 aa4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 CXCL3P19876 107 aa4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 CDKN1BP46527 198 aa4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 IBA57Q5T440 356 aaKnown RBP4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 Q6ZRN7 208 aaPredicted RBP4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 LINC00299Q6ZSB3 139 aa4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 UBE2DNLQ8IWF7 75 aa4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 SAT2Q96F10 170 aaPredicted RBP4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 H3BMQ9 156 aa4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 PYGO2Q9BRQ0 406 aa4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 LINC00588Q9Y4M8 146 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms