RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 SPRNQ5BIV9 151 aa15.34■□□□□ 0.05
PPFIA1-202ENST00000389547 STXBP6Q8NFX7 210 aa15.34■□□□□ 0.05
PPFIA1-202ENST00000389547 NPIPB3Q92617 1050 aa15.34■□□□□ 0.05
PPFIA1-202ENST00000389547 ATP5J2P56134 94 aa15.33■□□□□ 0.05
PPFIA1-202ENST00000389547 MEF2CQ06413 473 aaPredicted RBP15.33■□□□□ 0.05
PPFIA1-202ENST00000389547 ATP6V0BQ99437 205 aa15.33■□□□□ 0.05
PPFIA1-202ENST00000389547 C9orf118A6NHY6 69 aa15.33■□□□□ 0.04
PPFIA1-202ENST00000389547 C22orf34Q6ZV56 151 aa15.33■□□□□ 0.04
PPFIA1-202ENST00000389547 OR9G1Q8NH87 305 aa15.33■□□□□ 0.04
PPFIA1-202ENST00000389547 RBPMS2Q6ZRY4 209 aaKnown RBP15.33■□□□□ 0.04
PPFIA1-202ENST00000389547 FAM169BQ8N8A8 192 aa15.33■□□□□ 0.04
PPFIA1-202ENST00000389547 ZNF418Q8TF45 676 aaPredicted RBP15.33■□□□□ 0.04
PPFIA1-202ENST00000389547 USP9XQ93008 2570 aaPredicted RBP15.33■□□□□ 0.04
PPFIA1-202ENST00000389547 NCKAP5O14513 1909 aa15.33■□□□□ 0.04
PPFIA1-202ENST00000389547 IGHV3OR16-10A0A075B7F0 116 aa15.32■□□□□ 0.04
PPFIA1-202ENST00000389547 ZNF672Q499Z4 452 aaPredicted RBP15.32■□□□□ 0.04
PPFIA1-202ENST00000389547 OR4X2Q8NGF9 303 aa15.32■□□□□ 0.04
PPFIA1-202ENST00000389547 FASNP49327 2511 aaKnown RBP15.32■□□□□ 0.04
PPFIA1-202ENST00000389547 LYPD2Q6UXB3 125 aa15.32■□□□□ 0.04
PPFIA1-202ENST00000389547 TRAV3A0A0B4J244 114 aa15.32■□□□□ 0.04
PPFIA1-202ENST00000389547 CEACAM3P40198 252 aa15.32■□□□□ 0.04
PPFIA1-202ENST00000389547 Q1RN00 199 aa15.32■□□□□ 0.04
PPFIA1-202ENST00000389547 BCL6BQ8N143 479 aaPredicted RBP15.32■□□□□ 0.04
PPFIA1-202ENST00000389547 SONP18583 2426 aaKnown RBP15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 GOLT1AQ6ZVE7 132 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 OR4A5Q8NH83 315 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 GPR82Q96P67 336 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 MYO9AB2RTY4 2548 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 LINC00473A8K010 186 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 K7EP34 96 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 CTRLP40313 264 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 MSMPQ1L6U9 139 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 OR4F17Q8NGA8 305 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 C19orf24Q9BVV8 132 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 ZNRD1Q9P1U0 126 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 KIAA1549Q9HCM3 1950 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 A0A1B0GUT8 65 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 REG1AP05451 166 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 KRTAP27-1Q3LI81 207 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 LINC00173Q6ZV60 143 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 LHFPL4Q7Z7J7 247 aa15.31■□□□□ 0.04
PPFIA1-202ENST00000389547 TMEM178BH3BS89 294 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 COL8A2P25067 703 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 ETDBQ3ZM63 59 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 HCP5Q6MZN7 132 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 LINC00305Q7Z4B0 112 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 MUC3AQ02505 3323 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 TNCP24821 2201 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 DLX1P56177 255 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 ERVK11-1P61568 191 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 OR1L8Q8NGR8 309 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 FAM168AQ92567 244 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 SAA2-SAA4A0A096LPE2 208 aa15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 SAA2P0DJI9 122 aaPredicted RBP15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 RPS20P60866 119 aaKnown RBP15.3■□□□□ 0.04
PPFIA1-202ENST00000389547 ZNF462Q96JM2 2506 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 MOSP00540 346 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 NUP37Q8NFH4 326 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 ZNF479Q96JC4 524 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 MRPL32Q9BYC8 188 aaKnown RBP15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 TMEM160Q9NX00 188 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 H3BRM9 83 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 PRSS57Q6UWY2 283 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 GEMIN7Q9H840 131 aaKnown RBP15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 NBEAP1P0C6P0 100 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 IGLC1P0CG04 106 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 RABAC1Q9UI14 185 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 LINC00312Q9Y6C7 94 aa15.29■□□□□ 0.04
PPFIA1-202ENST00000389547 IGHV1-24A0A0C4DH33 117 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 KIR3DL3Q8N743 410 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 FAM222BQ8WU58 562 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 ANAPC13Q9BS18 74 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 TEX48A0A1B0GUV7 120 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 AAMDCQ9H7C9 122 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 COX6B1P14854 86 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 TWIST1Q15672 202 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 RASL11AQ6T310 242 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 PRELID3AQ96N28 172 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 MRPL20Q9BYC9 149 aaKnown RBP15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 GAGE12HA6NDE8 117 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 C11orf53Q8IXP5 236 aa15.28■□□□□ 0.04
PPFIA1-202ENST00000389547 ABCA2Q9BZC7 2435 aa15.27■□□□□ 0.04
PPFIA1-202ENST00000389547 POLQO75417 2590 aa15.27■□□□□ 0.04
PPFIA1-202ENST00000389547 APOMO95445 188 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 MYOD1P15172 320 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 ATP5L2Q7Z4Y8 100 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 ZNF295-AS1Q8N0V1 137 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 OR9G4Q8NGQ1 327 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 ORM1P02763 201 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 PSMB2P49721 201 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 GAGE13Q4V321 117 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 LYRM7Q5U5X0 104 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 TTC9CQ8N5M4 171 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 TEX45Q8NA69 505 aa15.27■□□□□ 0.03
PPFIA1-202ENST00000389547 TGFAP01135 160 aa15.26■□□□□ 0.03
PPFIA1-202ENST00000389547 THBDP07204 575 aa15.26■□□□□ 0.03
PPFIA1-202ENST00000389547 DUTP33316 252 aaKnown RBP15.26■□□□□ 0.03
PPFIA1-202ENST00000389547 GAFA1Q96PS6 74 aa15.26■□□□□ 0.03
PPFIA1-202ENST00000389547 IGLV3-9A0A075B6K5 115 aa15.26■□□□□ 0.03
PPFIA1-202ENST00000389547 TTC32Q5I0X7 151 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms