RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 OR2G3Q8NGZ4 309 aa11.59□□□□□ -0.55
PDGFB-202ENST00000381551 PRR25Q96S07 402 aa11.59□□□□□ -0.55
PDGFB-202ENST00000381551 SLC25A32Q9H2D1 315 aa11.59□□□□□ -0.55
PDGFB-202ENST00000381551 MS4A6AQ9H2W1 248 aa11.59□□□□□ -0.55
PDGFB-202ENST00000381551 SEPSECSQ9HD40 501 aaKnown RBP11.59□□□□□ -0.55
PDGFB-202ENST00000381551 RNF24Q9Y225 148 aa11.59□□□□□ -0.55
PDGFB-202ENST00000381551 SMAD5-AS1Q9Y6J3 95 aa11.59□□□□□ -0.55
PDGFB-202ENST00000381551 IGKV3-7A0A075B6H7 116 aa11.58□□□□□ -0.56
PDGFB-202ENST00000381551 TRAV5A0A0B4J249 113 aa11.58□□□□□ -0.56
PDGFB-202ENST00000381551 PAFAH1B2P68402 229 aa11.58□□□□□ -0.56
PDGFB-202ENST00000381551 FAM78BQ5VT40 261 aa11.58□□□□□ -0.56
PDGFB-202ENST00000381551 C9orf62Q8N4C0 152 aa11.58□□□□□ -0.56
PDGFB-202ENST00000381551 GPR82Q96P67 336 aa11.58□□□□□ -0.56
PDGFB-202ENST00000381551 SH3BGRL3Q9H299 93 aa11.58□□□□□ -0.56
PDGFB-202ENST00000381551 TRAV2A0A0B4J234 112 aa11.57□□□□□ -0.56
PDGFB-202ENST00000381551 MRPS12O15235 138 aaKnown RBP11.57□□□□□ -0.56
PDGFB-202ENST00000381551 PRB2P02812 416 aaPredicted RBP11.57□□□□□ -0.56
PDGFB-202ENST00000381551 TFPI2P48307 235 aa11.57□□□□□ -0.56
PDGFB-202ENST00000381551 Q8N1Y9 231 aa11.57□□□□□ -0.56
PDGFB-202ENST00000381551 C17orf77Q96MU5 243 aa11.57□□□□□ -0.56
PDGFB-202ENST00000381551 ZNF471Q9BX82 626 aaPredicted RBP11.57□□□□□ -0.56
PDGFB-202ENST00000381551 OR4C46A6NHA9 309 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 DNASE2O00115 360 aaPredicted RBP11.56□□□□□ -0.56
PDGFB-202ENST00000381551 SPP1P10451 314 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 RPL7P18124 248 aaKnown RBP11.56□□□□□ -0.56
PDGFB-202ENST00000381551 M6PRP20645 277 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 GALR1P47211 349 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 ACOT6Q3I5F7 207 aaPredicted RBP11.56□□□□□ -0.56
PDGFB-202ENST00000381551 SPATA31B1PQ5VZV4 182 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 MIR17HGQ75NE6 70 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 WFDC3Q8IUB2 231 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 STXBP6Q8NFX7 210 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 DCANP1Q8TF63 244 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 NRN1Q9NPD7 142 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 AURKAIP1Q9NWT8 199 aaPredicted RBP11.56□□□□□ -0.56
PDGFB-202ENST00000381551 FUT9Q9Y231 359 aa11.56□□□□□ -0.56
PDGFB-202ENST00000381551 K7EQG2 157 aa11.55□□□□□ -0.56
PDGFB-202ENST00000381551 CD7P09564 240 aa11.55□□□□□ -0.56
PDGFB-202ENST00000381551 NKX2-5P52952 324 aaPredicted RBP11.55□□□□□ -0.56
PDGFB-202ENST00000381551 RAB2AP61019 212 aa11.55□□□□□ -0.56
PDGFB-202ENST00000381551 BPIFA4PQ86YQ2 179 aa11.55□□□□□ -0.56
PDGFB-202ENST00000381551 BAP18Q8IXM2 172 aa11.55□□□□□ -0.56
PDGFB-202ENST00000381551 OR10G4Q8NGN3 311 aa11.55□□□□□ -0.56
PDGFB-202ENST00000381551 OR10G9Q8NGN4 311 aa11.55□□□□□ -0.56
PDGFB-202ENST00000381551 OR10G7Q8NGN6 311 aa11.55□□□□□ -0.56
PDGFB-202ENST00000381551 MRPL32Q9BYC8 188 aaKnown RBP11.55□□□□□ -0.56
PDGFB-202ENST00000381551 MBP02144 154 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 CD81P60033 236 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 RHOBP62745 196 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
PDGFB-202ENST00000381551 GTSCR1Q86UQ5 136 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 RPP25LQ8N5L8 163 aaKnown RBP11.54□□□□□ -0.56
PDGFB-202ENST00000381551 STOML3Q8TAV4 291 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 SLC25A2Q9BXI2 301 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 RPRMQ9NS64 109 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 C19orf73Q9NVV2 129 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 TMEM14CQ9P0S9 112 aa11.54□□□□□ -0.56
PDGFB-202ENST00000381551 K7EIL1 84 aa11.53□□□□□ -0.56
PDGFB-202ENST00000381551 SEC11BP0C7V7 166 aa11.53□□□□□ -0.56
PDGFB-202ENST00000381551 TPT1P13693 172 aaKnown RBP11.53□□□□□ -0.56
PDGFB-202ENST00000381551 CMC4P56277 68 aaPredicted RBP11.53□□□□□ -0.56
PDGFB-202ENST00000381551 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
PDGFB-202ENST00000381551 SLC51BQ86UW2 128 aa11.53□□□□□ -0.56
PDGFB-202ENST00000381551 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
PDGFB-202ENST00000381551 FAM110AQ9BQ89 295 aa11.53□□□□□ -0.56
PDGFB-202ENST00000381551 PLA2G2EQ9NZK7 142 aa11.53□□□□□ -0.56
PDGFB-202ENST00000381551 A0A087X0K7 114 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 A0A1W2PPV4 95 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 H3BQ15 152 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 SOCS3O14543 225 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 IGLC2P0DOY2 106 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 ATF4P18848 351 aaPredicted RBP11.52□□□□□ -0.57
PDGFB-202ENST00000381551 C4BPBP20851 252 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 DEFA6Q01524 100 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 FAM122CQ6P4D5 195 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 HRH4Q9H3N8 390 aa11.52□□□□□ -0.57
PDGFB-202ENST00000381551 EIF3GO75821 320 aaKnown RBP eCLIP11.51□□□□□ -0.57
PDGFB-202ENST00000381551 SNRPCP09234 159 aaKnown RBP11.51□□□□□ -0.57
PDGFB-202ENST00000381551 MEOX2P50222 304 aa11.51□□□□□ -0.57
PDGFB-202ENST00000381551 OR51M1Q9H341 326 aa11.51□□□□□ -0.57
PDGFB-202ENST00000381551 ZNF586Q9NXT0 402 aa11.51□□□□□ -0.57
PDGFB-202ENST00000381551 UBQLN2Q9UHD9 624 aa11.51□□□□□ -0.57
PDGFB-202ENST00000381551 BOLA1Q9Y3E2 137 aa11.51□□□□□ -0.57
PDGFB-202ENST00000381551 OR11H12B2RN74 326 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 ISLRO14498 428 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 PYYP10082 97 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 HIST1H1EP10412 219 aaKnown RBP11.5□□□□□ -0.57
PDGFB-202ENST00000381551 AKR1C8PQ5T2L2 129 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 SAMD13Q5VXD3 122 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 DEFB125Q8N687 156 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 RAB24Q969Q5 203 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 ZNF503Q96F45 646 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 ACTR3CQ9C0K3 210 aaPredicted RBP11.5□□□□□ -0.57
PDGFB-202ENST00000381551 MAP6D1Q9H9H5 199 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 MEGF8Q7Z7M0 2845 aa11.5□□□□□ -0.57
PDGFB-202ENST00000381551 TRAV8-2A0A0B4J237 113 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 UMAD1C9J7I0 102 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms