RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 IFNA21P01568 189 aa12.29□□□□□ -0.44
HMGN1-204ENST00000380749 GATA2P23769 480 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-204ENST00000380749 SPANXN2Q5MJ10 180 aa12.29□□□□□ -0.44
HMGN1-204ENST00000380749 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.29□□□□□ -0.44
HMGN1-204ENST00000380749 CCDC190Q86UF4 302 aa12.29□□□□□ -0.44
HMGN1-204ENST00000380749 C1orf158Q8N1D5 194 aa12.29□□□□□ -0.44
HMGN1-204ENST00000380749 IGF2BP2-AS1Q96M15 143 aa12.29□□□□□ -0.44
HMGN1-204ENST00000380749 YTHDF2Q9Y5A9 579 aaKnown RBP12.29□□□□□ -0.44
HMGN1-204ENST00000380749 A8MTW9 85 aa12.28□□□□□ -0.44
HMGN1-204ENST00000380749 DUSP14O95147 198 aaKnown RBP12.28□□□□□ -0.44
HMGN1-204ENST00000380749 INSP01308 110 aa12.28□□□□□ -0.44
HMGN1-204ENST00000380749 HTN3P15516 51 aa12.28□□□□□ -0.44
HMGN1-204ENST00000380749 RAP2BP61225 183 aa12.28□□□□□ -0.44
HMGN1-204ENST00000380749 TMEM144Q7Z5S9 345 aa12.28□□□□□ -0.44
HMGN1-204ENST00000380749 H3BRN7 92 aa12.27□□□□□ -0.45
HMGN1-204ENST00000380749 IL5P05113 134 aa12.27□□□□□ -0.45
HMGN1-204ENST00000380749 CNN1P51911 297 aaKnown RBP12.27□□□□□ -0.45
HMGN1-204ENST00000380749 DAD1P61803 113 aa12.27□□□□□ -0.45
HMGN1-204ENST00000380749 TRIQKQ629K1 86 aa12.27□□□□□ -0.45
HMGN1-204ENST00000380749 CYP2G1PQ6ZSU1 146 aa12.27□□□□□ -0.45
HMGN1-204ENST00000380749 HIGD1AQ9Y241 93 aa12.27□□□□□ -0.45
HMGN1-204ENST00000380749 C9orf170A2RU37 121 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 M0R2N4 97 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 SSSCA1O60232 199 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 ADAP1O75689 374 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 RPL7P18124 248 aaKnown RBP12.26□□□□□ -0.45
HMGN1-204ENST00000380749 POLR2GP62487 172 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGN1-204ENST00000380749 FGL1Q08830 312 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 LGALS9BQ3B8N2 356 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 AMTNQ6UX39 209 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 TMEM182Q6ZP80 229 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-204ENST00000380749 S100A7AQ86SG5 101 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 OR11H7Q8NGC8 314 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 SLC25A39Q9BZJ4 359 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-204ENST00000380749 PSENENQ9NZ42 101 aa12.26□□□□□ -0.45
HMGN1-204ENST00000380749 NAP1L6A6NFF2 107 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 LINC00869P0C866 280 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 SELENOTP62341 195 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 ID3Q02535 119 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 RNF182Q8N6D2 247 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 ZNF738Q8NE65 137 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 SHANK2-AS3Q9BTD1 123 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 SRRQ9GZT4 340 aa12.25□□□□□ -0.45
HMGN1-204ENST00000380749 PRSS29PA6NIE9 313 aa12.24□□□□□ -0.45
HMGN1-204ENST00000380749 M0R2Z0 102 aa12.24□□□□□ -0.45
HMGN1-204ENST00000380749 HYPMO75409 117 aa12.24□□□□□ -0.45
HMGN1-204ENST00000380749 NDUFB6O95139 128 aa12.24□□□□□ -0.45
HMGN1-204ENST00000380749 OR5G3P0C626 314 aa12.24□□□□□ -0.45
HMGN1-204ENST00000380749 B2MP61769 119 aa12.24□□□□□ -0.45
HMGN1-204ENST00000380749 KRTAP17-1Q9BYP8 105 aa12.24□□□□□ -0.45
HMGN1-204ENST00000380749 RNF24Q9Y225 148 aa12.24□□□□□ -0.45
HMGN1-204ENST00000380749 TRAV8-2A0A0B4J237 113 aa12.23□□□□□ -0.45
HMGN1-204ENST00000380749 A0A1B0GVY2 172 aa12.23□□□□□ -0.45
HMGN1-204ENST00000380749 DLK1P80370 383 aa12.23□□□□□ -0.45
HMGN1-204ENST00000380749 RNF212Q495C1 297 aa12.23□□□□□ -0.45
HMGN1-204ENST00000380749 IGFL4Q6B9Z1 124 aa12.23□□□□□ -0.45
HMGN1-204ENST00000380749 TMEM88Q6PEY1 159 aa12.23□□□□□ -0.45
HMGN1-204ENST00000380749 PLA2G2EQ9NZK7 142 aa12.23□□□□□ -0.45
HMGN1-204ENST00000380749 MGAT4CQ9UBM8 478 aa12.23□□□□□ -0.45
HMGN1-204ENST00000380749 IGLV2-18A0A075B6J9 118 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 LYRM9A8MSI8 78 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 BOLA2-SMG1P6H3BVE0 249 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 RTL8CO15255 209 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 SCGB1D2O95969 90 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 OR4E1P0C645 316 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 PLP1P60201 277 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 RRAS2P62070 204 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-204ENST00000380749 C4orf46Q504U0 113 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 SOHLH1Q5JUK2 328 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 BAP18Q8IXM2 172 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 C15orf53Q8NAA6 179 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 SMIM8Q96KF7 97 aa12.22□□□□□ -0.45
HMGN1-204ENST00000380749 A0A087X0K7 114 aa12.21□□□□□ -0.45
HMGN1-204ENST00000380749 CENPXA8MT69 81 aa12.21□□□□□ -0.45
HMGN1-204ENST00000380749 ZNF705GA8MUZ8 300 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-204ENST00000380749 FNDC10F2Z333 226 aa12.21□□□□□ -0.45
HMGN1-204ENST00000380749 METTL15P1P0C7V9 234 aa12.21□□□□□ -0.45
HMGN1-204ENST00000380749 TSPOP30536 169 aa12.21□□□□□ -0.45
HMGN1-204ENST00000380749 HIST1H1AQ02539 215 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-204ENST00000380749 LRRC20Q8TCA0 184 aa12.21□□□□□ -0.45
HMGN1-204ENST00000380749 UHRF2Q96PU4 802 aa12.21□□□□□ -0.45
HMGN1-204ENST00000380749 PPP1R14DQ9NXH3 145 aa12.21□□□□□ -0.45
HMGN1-204ENST00000380749 FLVCR2Q9UPI3 526 aa12.21□□□□□ -0.45
HMGN1-204ENST00000380749 PMS2P5A8MQ11 134 aa12.2□□□□□ -0.46
HMGN1-204ENST00000380749 ZNF701M0R085 212 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-204ENST00000380749 CRXO43186 299 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-204ENST00000380749 RHOBP62745 196 aa12.2□□□□□ -0.46
HMGN1-204ENST00000380749 TEPPQ6URK8 271 aa12.2□□□□□ -0.46
HMGN1-204ENST00000380749 TMEM14EPQ6UXP3 125 aa12.2□□□□□ -0.46
HMGN1-204ENST00000380749 OR10P1Q8NGE3 313 aa12.2□□□□□ -0.46
HMGN1-204ENST00000380749 ARL6Q9H0F7 186 aa12.2□□□□□ -0.46
HMGN1-204ENST00000380749 RBM38Q9H0Z9 239 aaKnown RBP12.2□□□□□ -0.46
HMGN1-204ENST00000380749 NPVFQ9HCQ7 196 aa12.2□□□□□ -0.46
HMGN1-204ENST00000380749 K7EPK0 472 aa12.19□□□□□ -0.46
HMGN1-204ENST00000380749 TSC22D2O75157 780 aa12.19□□□□□ -0.46
HMGN1-204ENST00000380749 CCNKO75909 580 aa12.19□□□□□ -0.46
HMGN1-204ENST00000380749 SLC38A11Q08AI6 406 aa12.19□□□□□ -0.46
HMGN1-204ENST00000380749 BAK1Q16611 211 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms