RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 LGALS9BQ3B8N2 356 aa11.97□□□□□ -0.49
SMN2-201ENST00000380741 ACOT7LQ6ZUV0 252 aa11.97□□□□□ -0.49
SMN2-201ENST00000380741 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
SMN2-201ENST00000380741 OR4D5Q8NGN0 318 aa11.97□□□□□ -0.49
SMN2-201ENST00000380741 NACAE9PAV3 2078 aa11.97□□□□□ -0.49
SMN2-201ENST00000380741 IGLV2-18A0A075B6J9 118 aa11.96□□□□□ -0.49
SMN2-201ENST00000380741 IGFL4Q6B9Z1 124 aa11.96□□□□□ -0.49
SMN2-201ENST00000380741 OR1B1Q8NGR6 318 aa11.96□□□□□ -0.49
SMN2-201ENST00000380741 DEDD2Q8WXF8 326 aa11.96□□□□□ -0.49
SMN2-201ENST00000380741 IGF2BP2-AS1Q96M15 143 aa11.96□□□□□ -0.49
SMN2-201ENST00000380741 TMEM208Q9BTX3 173 aa11.96□□□□□ -0.49
SMN2-201ENST00000380741 TMEM147Q9BVK8 224 aa11.96□□□□□ -0.49
SMN2-201ENST00000380741 CNN1P51911 297 aaKnown RBP11.95□□□□□ -0.5
SMN2-201ENST00000380741 TMEM88Q6PEY1 159 aa11.95□□□□□ -0.5
SMN2-201ENST00000380741 RNF182Q8N6D2 247 aa11.95□□□□□ -0.5
SMN2-201ENST00000380741 GPR82Q96P67 336 aa11.95□□□□□ -0.5
SMN2-201ENST00000380741 STRAPQ9Y3F4 350 aaKnown RBP11.95□□□□□ -0.5
SMN2-201ENST00000380741 TRAV8-2A0A0B4J237 113 aa11.94□□□□□ -0.5
SMN2-201ENST00000380741 M0R2Z0 102 aa11.94□□□□□ -0.5
SMN2-201ENST00000380741 PRM2P04554 102 aa11.94□□□□□ -0.5
SMN2-201ENST00000380741 DAD1P61803 113 aa11.94□□□□□ -0.5
SMN2-201ENST00000380741 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
SMN2-201ENST00000380741 Q6ZR54 194 aa11.94□□□□□ -0.5
SMN2-201ENST00000380741 TMEM144Q7Z5S9 345 aa11.94□□□□□ -0.5
SMN2-201ENST00000380741 OR11H7Q8NGC8 314 aa11.94□□□□□ -0.5
SMN2-201ENST00000380741 SLC25A39Q9BZJ4 359 aaPredicted RBP11.94□□□□□ -0.5
SMN2-201ENST00000380741 SMCO3A2RU48 225 aa11.93□□□□□ -0.5
SMN2-201ENST00000380741 H3BRN7 92 aa11.93□□□□□ -0.5
SMN2-201ENST00000380741 CRXO43186 299 aaPredicted RBP11.93□□□□□ -0.5
SMN2-201ENST00000380741 ADAP1O75689 374 aa11.93□□□□□ -0.5
SMN2-201ENST00000380741 DUSP14O95147 198 aaKnown RBP11.93□□□□□ -0.5
SMN2-201ENST00000380741 S100A7P31151 101 aa11.93□□□□□ -0.5
SMN2-201ENST00000380741 S100A5P33763 92 aa11.93□□□□□ -0.5
SMN2-201ENST00000380741 POLR2GP62487 172 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMN2-201ENST00000380741 FGL1Q08830 312 aa11.93□□□□□ -0.5
SMN2-201ENST00000380741 RNF212Q495C1 297 aa11.93□□□□□ -0.5
SMN2-201ENST00000380741 CYP2G1PQ6ZSU1 146 aa11.93□□□□□ -0.5
SMN2-201ENST00000380741 CCDC190Q86UF4 302 aa11.93□□□□□ -0.5
SMN2-201ENST00000380741 RYR1P21817 5038 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 C9orf170A2RU37 121 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 ZNF705GA8MUZ8 300 aaPredicted RBP11.92□□□□□ -0.5
SMN2-201ENST00000380741 INSP01308 110 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 IL5P05113 134 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 UBE2MP61081 183 aaKnown RBP11.92□□□□□ -0.5
SMN2-201ENST00000380741 ID3Q02535 119 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 BAP18Q8IXM2 172 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 SHANK2-AS3Q9BTD1 123 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 KRTAP3-3Q9BYR6 98 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 KRTAP3-2Q9BYR7 98 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 HIGD1AQ9Y241 93 aa11.92□□□□□ -0.5
SMN2-201ENST00000380741 MUC4Q99102 2169 aa11.91□□□□□ -0.5
SMN2-201ENST00000380741 PMS2P5A8MQ11 134 aa11.91□□□□□ -0.5
SMN2-201ENST00000380741 SSSCA1O60232 199 aa11.91□□□□□ -0.5
SMN2-201ENST00000380741 MED14OSP0DP75 135 aa11.91□□□□□ -0.5
SMN2-201ENST00000380741 RAP2BP61225 183 aa11.91□□□□□ -0.5
SMN2-201ENST00000380741 DMRTA1Q5VZB9 504 aa11.91□□□□□ -0.5
SMN2-201ENST00000380741 ZNF738Q8NE65 137 aa11.91□□□□□ -0.5
SMN2-201ENST00000380741 PSENENQ9NZ42 101 aa11.91□□□□□ -0.5
SMN2-201ENST00000380741 TRAV12-2A0A075B6T6 113 aa11.9□□□□□ -0.5
SMN2-201ENST00000380741 CCDC160A6NGH7 325 aa11.9□□□□□ -0.5
SMN2-201ENST00000380741 HYPMO75409 117 aa11.9□□□□□ -0.5
SMN2-201ENST00000380741 CCNKO75909 580 aa11.9□□□□□ -0.5
SMN2-201ENST00000380741 LINC00869P0C866 280 aa11.9□□□□□ -0.5
SMN2-201ENST00000380741 RPL7P18124 248 aaKnown RBP11.9□□□□□ -0.5
SMN2-201ENST00000380741 UHRF2Q96PU4 802 aa11.9□□□□□ -0.5
SMN2-201ENST00000380741 LYRM9A8MSI8 78 aa11.89□□□□□ -0.51
SMN2-201ENST00000380741 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
SMN2-201ENST00000380741 OR5G3P0C626 314 aa11.89□□□□□ -0.51
SMN2-201ENST00000380741 PLP1P60201 277 aa11.89□□□□□ -0.51
SMN2-201ENST00000380741 RRAS2P62070 204 aaPredicted RBP11.89□□□□□ -0.51
SMN2-201ENST00000380741 SRRQ9GZT4 340 aa11.89□□□□□ -0.51
SMN2-201ENST00000380741 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
SMN2-201ENST00000380741 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
SMN2-201ENST00000380741 NDUFB6O95139 128 aa11.88□□□□□ -0.51
SMN2-201ENST00000380741 CXCL3P19876 107 aa11.88□□□□□ -0.51
SMN2-201ENST00000380741 TSPOP30536 169 aa11.88□□□□□ -0.51
SMN2-201ENST00000380741 B2MP61769 119 aa11.88□□□□□ -0.51
SMN2-201ENST00000380741 SELENOTP62341 195 aa11.88□□□□□ -0.51
SMN2-201ENST00000380741 HIST1H1AQ02539 215 aaPredicted RBP11.88□□□□□ -0.51
SMN2-201ENST00000380741 SPANXN2Q5MJ10 180 aa11.88□□□□□ -0.51
SMN2-201ENST00000380741 C15orf53Q8NAA6 179 aa11.88□□□□□ -0.51
SMN2-201ENST00000380741 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
SMN2-201ENST00000380741 A0A087X0K7 114 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 OR4E1P0C645 316 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 METTL15P1P0C7V9 234 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 DEFB130BP0DP73 79 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 DEFB130AP0DP74 79 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 PRB4P10163 310 aaPredicted RBP11.87□□□□□ -0.51
SMN2-201ENST00000380741 AZU1P20160 251 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 DLK1P80370 383 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 BAK1Q16611 211 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 SOHLH1Q5JUK2 328 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 TMEM14EPQ6UXP3 125 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 OR8A1Q8NGG7 326 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 ARL6Q9H0F7 186 aa11.87□□□□□ -0.51
SMN2-201ENST00000380741 NAP1L6A6NFF2 107 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 INPP1P49441 399 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 RHOBP62745 196 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 SLC38A11Q08AI6 406 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 FCN2Q15485 313 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms