RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TP53BP1Q12888 1972 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-202ENST00000380518 ADARB2-AS1A8MUL3 147 aa13.09□□□□□ -0.31
COL2A1-202ENST00000380518 RPRMLQ8N4K4 120 aa13.09□□□□□ -0.31
COL2A1-202ENST00000380518 TMEM86BQ8N661 226 aa13.08□□□□□ -0.31
COL2A1-202ENST00000380518 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.31
COL2A1-202ENST00000380518 THADAQ6YHU6 1953 aa13.08□□□□□ -0.32
COL2A1-202ENST00000380518 PSG3Q16557 428 aa13.08□□□□□ -0.32
COL2A1-202ENST00000380518 ZNF688P0C7X2 276 aa13.08□□□□□ -0.32
COL2A1-202ENST00000380518 ITGB1BP1O14713 200 aa13.08□□□□□ -0.32
COL2A1-202ENST00000380518 LINC00205P59089 165 aa13.08□□□□□ -0.32
COL2A1-202ENST00000380518 ZNF876PQ49A33 203 aa13.08□□□□□ -0.32
COL2A1-202ENST00000380518 HEATR1Q9H583 2144 aaKnown RBP13.08□□□□□ -0.32
COL2A1-202ENST00000380518 SH2D1AO60880 128 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 ZNF474Q6S9Z5 364 aaPredicted RBP13.07□□□□□ -0.32
COL2A1-202ENST00000380518 MRPL27Q9P0M9 148 aaKnown RBP13.07□□□□□ -0.32
COL2A1-202ENST00000380518 A8MWV9 139 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 LCN12Q6JVE5 192 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 DPH3P1Q9H4G8 78 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 SAMD5Q5TGI4 173 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 GTSCR1Q86UQ5 136 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 DTX2Q86UW9 622 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 Q8TAT8 98 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 DOCK10Q96BY6 2186 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 USMG5Q96IX5 58 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 RCHY1Q96PM5 261 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 ERG28Q9UKR5 140 aa13.07□□□□□ -0.32
COL2A1-202ENST00000380518 SCN5AQ14524 2016 aa13.06□□□□□ -0.32
COL2A1-202ENST00000380518 TRAV8-1A0A0A6YYK1 113 aa13.06□□□□□ -0.32
COL2A1-202ENST00000380518 TOMM40O96008 361 aa13.06□□□□□ -0.32
COL2A1-202ENST00000380518 C3orf36Q3SXR2 165 aa13.06□□□□□ -0.32
COL2A1-202ENST00000380518 SRSF8Q9BRL6 282 aaKnown RBP13.06□□□□□ -0.32
COL2A1-202ENST00000380518 A0A0U1RRA0 63 aa13.06□□□□□ -0.32
COL2A1-202ENST00000380518 FAM90A2PQ658T7 463 aa13.06□□□□□ -0.32
COL2A1-202ENST00000380518 C3orf79P0CE67 100 aa13.06□□□□□ -0.32
COL2A1-202ENST00000380518 CRPP02741 224 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 BRD3OSQ6XYD6 125 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 SPOCK3Q9BQ16 436 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 FER1L5A0AVI2 2057 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 USF3Q68DE3 2245 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 VCYO14598 125 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 IGKV1-16P04430 117 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 IGHV3-64A0A075B6Q5 118 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 ETV2O00321 342 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-202ENST00000380518 RPL36AP83881 106 aaKnown RBP13.05□□□□□ -0.32
COL2A1-202ENST00000380518 NDPQ00604 133 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 RPL36ALQ969Q0 106 aaKnown RBP13.05□□□□□ -0.32
COL2A1-202ENST00000380518 PLEKHB2Q96CS7 222 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 GAGE13Q4V321 117 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 LYPD2Q6UXB3 125 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 DMRTC2Q8IXT2 367 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-202ENST00000380518 PRADC1Q9BSG0 188 aa13.05□□□□□ -0.32
COL2A1-202ENST00000380518 GUSBP1Q15486 140 aa13.04□□□□□ -0.32
COL2A1-202ENST00000380518 PYY3Q5JQD4 70 aa13.04□□□□□ -0.32
COL2A1-202ENST00000380518 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
COL2A1-202ENST00000380518 M0R2P5 195 aa13.04□□□□□ -0.32
COL2A1-202ENST00000380518 PRTN3P24158 256 aa13.04□□□□□ -0.32
COL2A1-202ENST00000380518 BCL6BQ8N143 479 aaPredicted RBP13.04□□□□□ -0.32
COL2A1-202ENST00000380518 GGTLC3B5MD39 225 aa13.04□□□□□ -0.32
COL2A1-202ENST00000380518 TMEM155Q4W5P6 130 aa13.04□□□□□ -0.32
COL2A1-202ENST00000380518 ZNF415Q09FC8 603 aa13.04□□□□□ -0.32
COL2A1-202ENST00000380518 A0A087WX48 190 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 IGKV1-6A0A0C4DH72 117 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 SAP30O75446 220 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 LINC00158P58513 81 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 LTBP1Q14766 1721 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 FCN3O75636 299 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 ATXN8Q156A1 80 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 MLANAQ16655 118 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 NSUN5P1Q3KNT7 163 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 PRR31Q5SQ13 230 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 PHF3Q92576 2039 aaKnown RBP13.03□□□□□ -0.32
COL2A1-202ENST00000380518 FAM223BA6NKX1 122 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 COL8A2P25067 703 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 SRSF6Q13247 344 aaKnown RBP13.03□□□□□ -0.32
COL2A1-202ENST00000380518 PDE6HQ13956 83 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 FAM223AQ8IWN6 122 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 SYS1-DBNDD2H3BUS1 97 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 ZNF329Q86UD4 541 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 SELENOKQ9Y6D0 94 aa13.03□□□□□ -0.32
COL2A1-202ENST00000380518 TMEM249Q2WGJ8 235 aa13.02□□□□□ -0.32
COL2A1-202ENST00000380518 HS3ST6Q96QI5 342 aa13.02□□□□□ -0.32
COL2A1-202ENST00000380518 SHANK2-AS3Q9BTD1 123 aa13.02□□□□□ -0.32
COL2A1-202ENST00000380518 ADCYAP1P18509 176 aa13.02□□□□□ -0.32
COL2A1-202ENST00000380518 Q86TA4 180 aa13.02□□□□□ -0.32
COL2A1-202ENST00000380518 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.32
COL2A1-202ENST00000380518 TEX43Q6ZNM6 134 aa13.02□□□□□ -0.33
COL2A1-202ENST00000380518 LMO1P25800 156 aa13.02□□□□□ -0.33
COL2A1-202ENST00000380518 A0A1W2PPI3 338 aa13.01□□□□□ -0.33
COL2A1-202ENST00000380518 hDV102S1A0JD36 115 aa13.01□□□□□ -0.33
COL2A1-202ENST00000380518 C14orf178Q8N769 122 aaPredicted RBP13.01□□□□□ -0.33
COL2A1-202ENST00000380518 RHPN1-AS1Q9BWJ2 59 aa13.01□□□□□ -0.33
COL2A1-202ENST00000380518 GNLYP22749 145 aa13.01□□□□□ -0.33
COL2A1-202ENST00000380518 A6NNC1 897 aa13.01□□□□□ -0.33
COL2A1-202ENST00000380518 TRGV1A0A0A0MS02 117 aa13.01□□□□□ -0.33
COL2A1-202ENST00000380518 SIGMAR1Q99720 223 aa13.01□□□□□ -0.33
COL2A1-202ENST00000380518 IGFL4Q6B9Z1 124 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 ZNF562Q6V9R5 426 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 TMEM158Q8WZ71 300 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 GFRA4Q9GZZ7 299 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms