RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 FAM24BQ8N5W8 94 aa8.76□□□□□ -1.01
DEPDC4-202ENST00000378244 ST6GAL2Q96JF0 529 aa8.76□□□□□ -1.01
DEPDC4-202ENST00000378244 HELTA6NFD8 242 aa8.76□□□□□ -1.01
DEPDC4-202ENST00000378244 MPDU1O75352 247 aa8.76□□□□□ -1.01
DEPDC4-202ENST00000378244 RPL29P47914 159 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-202ENST00000378244 OPCMLQ14982 345 aa8.76□□□□□ -1.01
DEPDC4-202ENST00000378244 ZNF124Q15973 351 aa8.76□□□□□ -1.01
DEPDC4-202ENST00000378244 HSD17B11Q8NBQ5 300 aa8.76□□□□□ -1.01
DEPDC4-202ENST00000378244 MFFQ9GZY8 342 aa8.76□□□□□ -1.01
DEPDC4-202ENST00000378244 PRKDCP78527 4128 aaKnown RBP8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 IGHV4-30-4P0DP06 118 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 CD300CQ08708 224 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 C10orf113Q5VZT2 155 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 APRG1Q8IVJ8 170 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 SHANK2-AS3Q9BTD1 123 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 PGPEP1LA6NFU8 196 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 CD5P06127 495 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 ZNF688P0C7X2 276 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 PLP1P60201 277 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 ODF3L2Q3SX64 289 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 WDR73Q6P4I2 378 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 SLC25A32Q9H2D1 315 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 TUBA4BQ9H853 241 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 DNAJC4Q9NNZ3 241 aa8.75□□□□□ -1.01
DEPDC4-202ENST00000378244 TRAV5A0A0B4J249 113 aa8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 RPL7L1Q6DKI1 246 aaKnown RBP8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 NRN1Q9NPD7 142 aa8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 DNAH3Q8TD57 4116 aa8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 C17orf112F2Z3M2 114 aa8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 H3BRN7 92 aa8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 EIF3GO75821 320 aaKnown RBP eCLIP8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 AKAP14Q86UN6 197 aa8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 DCANP1Q8TF63 244 aa8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 SEPSECSQ9HD40 501 aaKnown RBP8.74□□□□□ -1.01
DEPDC4-202ENST00000378244 ELOA3CA0A087WX78 387 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 H3BTX0 84 aa8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 FRMD6-AS1P0C7T7 363 aa8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 PRB4P10163 310 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 DEFB131AP59861 70 aa8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 ZNF266Q14584 549 aa8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 FFAR4Q5NUL3 377 aa8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 C1orf194Q5T5A4 169 aa8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 FAM78BQ5VT40 261 aa8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 ASCL2Q99929 193 aa8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 C19orf73Q9NVV2 129 aa8.73□□□□□ -1.01
DEPDC4-202ENST00000378244 GALR1P47211 349 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 PXDC1Q5TGL8 231 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 SPATA31B1PQ5VZV4 182 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 IGFL4Q6B9Z1 124 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 OR1L4Q8NGR5 311 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 PFDN5Q99471 154 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 K7EQG2 157 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 PSMG4Q5JS54 123 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 LINC00052Q96N35 136 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 SH3BGRL3Q9H299 93 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 SRD5A3Q9H8P0 318 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 MAP6D1Q9H9H5 199 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
DEPDC4-202ENST00000378244 CXCL2P19875 107 aa8.71□□□□□ -1.01
DEPDC4-202ENST00000378244 S100A7P31151 101 aa8.71□□□□□ -1.01
DEPDC4-202ENST00000378244 DEFB1P60022 68 aa8.71□□□□□ -1.01
DEPDC4-202ENST00000378244 S100A7AQ86SG5 101 aa8.71□□□□□ -1.01
DEPDC4-202ENST00000378244 GATAD1Q8WUU5 269 aa8.71□□□□□ -1.01
DEPDC4-202ENST00000378244 RPL7P18124 248 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-202ENST00000378244 ATP6V0CP27449 155 aa8.71□□□□□ -1.02
DEPDC4-202ENST00000378244 C17orf77Q96MU5 243 aa8.71□□□□□ -1.02
DEPDC4-202ENST00000378244 KCNIP2Q9NS61 270 aa8.71□□□□□ -1.02
DEPDC4-202ENST00000378244 HMSDA8MTL9 139 aa8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 MIR17HGQ75NE6 70 aa8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 BPIFA4PQ86YQ2 179 aa8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 TCTE3Q8IZS6 198 aa8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 C16orf92Q96LL3 132 aa8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 BORCS7-ASMTA0A0B4J1R7 106 aa8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 RPL35AP18077 110 aaKnown RBP8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 SNRPD3P62318 126 aaKnown RBP8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 ZNF674Q2M3X9 581 aa8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 SBSPONQ8IVN8 264 aa8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 LRRC20Q8TCA0 184 aa8.7□□□□□ -1.02
DEPDC4-202ENST00000378244 KNCNA6PVL3 124 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 HMGB3O15347 200 aaKnown RBP8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 PYYP10082 97 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 RAB2AP61019 212 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 KCNRGQ8N5I3 272 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 RNF182Q8N6D2 247 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 GPR82Q96P67 336 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 CYTL1Q9NRR1 136 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 RBMY1BA6NDE4 496 aaKnown RBP8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 RBMY1EA6NEQ0 496 aaKnown RBP8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 H3BQ15 152 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 PFDN1O60925 122 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 RBMY1DP0C7P1 496 aaKnown RBP8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 ACTL10Q5JWF8 245 aa8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 ZNF471Q9BX82 626 aaPredicted RBP8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 PARD6GQ9BYG4 376 aaPredicted RBP8.69□□□□□ -1.02
DEPDC4-202ENST00000378244 TRAV2A0A0B4J234 112 aa8.68□□□□□ -1.02
DEPDC4-202ENST00000378244 TAAR5O14804 337 aa8.68□□□□□ -1.02
DEPDC4-202ENST00000378244 MRPS12O15235 138 aaKnown RBP8.68□□□□□ -1.02
DEPDC4-202ENST00000378244 JTBO76095 146 aa8.68□□□□□ -1.02
DEPDC4-202ENST00000378244 OR10J4P0C629 311 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms