RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 PMCHL2Q9BQD1 86 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 hDV102S1A0JD36 115 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 COL8A1P27658 744 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 MRPL52Q86TS9 123 aaKnown RBP16.15■□□□□ 0.18
CLN5-201ENST00000377453 STXBP6Q8NFX7 210 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 IGHV1-24A0A0C4DH33 117 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 A8MWL6 223 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 BUB1B-PAK6H3BSN5 160 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 IGLV1-47P01700 117 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 GRNP28799 593 aaKnown RBP16.15■□□□□ 0.18
CLN5-201ENST00000377453 CA7P43166 264 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 COL25A1Q9BXS0 654 aaPredicted RBP16.15■□□□□ 0.18
CLN5-201ENST00000377453 IGLV2-11P01706 119 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 FMC1Q96HJ9 113 aa16.15■□□□□ 0.18
CLN5-201ENST00000377453 TRAV9-2A0A087WT02 112 aa16.14■□□□□ 0.17
CLN5-201ENST00000377453 C8orf31Q8N9H6 132 aa16.14■□□□□ 0.17
CLN5-201ENST00000377453 TPPP3Q9BW30 176 aa16.14■□□□□ 0.17
CLN5-201ENST00000377453 IGKV1-17P01599 117 aa16.14■□□□□ 0.17
CLN5-201ENST00000377453 CHRDL1Q9BU40 450 aa16.14■□□□□ 0.17
CLN5-201ENST00000377453 KAAG1Q9UBP8 84 aa16.14■□□□□ 0.17
CLN5-201ENST00000377453 ASH1LQ9NR48 2969 aaKnown RBP16.13■□□□□ 0.17
CLN5-201ENST00000377453 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.13■□□□□ 0.17
CLN5-201ENST00000377453 RPEQ96AT9 228 aa16.13■□□□□ 0.17
CLN5-201ENST00000377453 RALYQ9UKM9 306 aaKnown RBP16.13■□□□□ 0.17
CLN5-201ENST00000377453 HILPDAQ9Y5L2 63 aa16.13■□□□□ 0.17
CLN5-201ENST00000377453 MED13LQ71F56 2210 aa16.13■□□□□ 0.17
CLN5-201ENST00000377453 M0R3E3 92 aa16.13■□□□□ 0.17
CLN5-201ENST00000377453 PVRIGQ6DKI7 326 aa16.13■□□□□ 0.17
CLN5-201ENST00000377453 ATP5L2Q7Z4Y8 100 aa16.13■□□□□ 0.17
CLN5-201ENST00000377453 ZC2HC1AQ96GY0 325 aa16.13■□□□□ 0.17
CLN5-201ENST00000377453 JKAMPQ9P055 326 aa16.13■□□□□ 0.17
CLN5-201ENST00000377453 ZFP30Q9Y2G7 519 aa16.13■□□□□ 0.17
CLN5-201ENST00000377453 SPTA1P02549 2419 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 I3L2K1 104 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 CHEK1O14757 476 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 CNIH1O95406 144 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 FOXC1Q12948 553 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 KLHDC1Q8N7A1 406 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 RASL11BQ9BPW5 248 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 ONECUT1Q9UBC0 465 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 MUC21A0A0G2JKD1 596 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 MUC21A0A140T8X8 626 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 OR4C46A6NHA9 309 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 MUC21Q5SSG8 566 aa16.12■□□□□ 0.17
CLN5-201ENST00000377453 RBPMS2Q6ZRY4 209 aaKnown RBP16.12■□□□□ 0.17
CLN5-201ENST00000377453 PPIAL4CA0A0B4J2A2 164 aa16.11■□□□□ 0.17
CLN5-201ENST00000377453 TIMM23O14925 209 aa16.11■□□□□ 0.17
CLN5-201ENST00000377453 PPIAL4GP0DN37 164 aa16.11■□□□□ 0.17
CLN5-201ENST00000377453 GAGE1Q13065 139 aa16.11■□□□□ 0.17
CLN5-201ENST00000377453 TMEM70Q9BUB7 260 aa16.11■□□□□ 0.17
CLN5-201ENST00000377453 ARMS2P0C7Q2 107 aa16.11■□□□□ 0.17
CLN5-201ENST00000377453 KLRD1Q13241 179 aa16.11■□□□□ 0.17
CLN5-201ENST00000377453 OVOL3O00110 214 aa16.1■□□□□ 0.17
CLN5-201ENST00000377453 OR4F17Q8NGA8 305 aa16.1■□□□□ 0.17
CLN5-201ENST00000377453 TMSB15BA0A087X1C1 80 aa16.09■□□□□ 0.17
CLN5-201ENST00000377453 LOC102724200A0A096LPH7 203 aaPredicted RBP16.09■□□□□ 0.17
CLN5-201ENST00000377453 IGHV3-23P01764 117 aa16.09■□□□□ 0.17
CLN5-201ENST00000377453 TMUB1Q9BVT8 246 aa16.09■□□□□ 0.17
CLN5-201ENST00000377453 OTORQ9NRC9 128 aa16.09■□□□□ 0.17
CLN5-201ENST00000377453 ZNF492Q9P255 531 aa16.09■□□□□ 0.17
CLN5-201ENST00000377453 K7EIM0 57 aa16.09■□□□□ 0.17
CLN5-201ENST00000377453 PTPRQQ9UMZ3 2332 aa16.09■□□□□ 0.17
CLN5-201ENST00000377453 FAM90A27PA6NNH2 459 aa16.08■□□□□ 0.17
CLN5-201ENST00000377453 LEPROTL1O95214 131 aa16.08■□□□□ 0.17
CLN5-201ENST00000377453 PLP1P60201 277 aa16.08■□□□□ 0.17
CLN5-201ENST00000377453 C8orf49Q96NF6 230 aa16.08■□□□□ 0.17
CLN5-201ENST00000377453 ATRXP46100 2492 aa16.08■□□□□ 0.16
CLN5-201ENST00000377453 VSTM5A8MXK1 200 aa16.08■□□□□ 0.16
CLN5-201ENST00000377453 SYS1-DBNDD2H3BUS1 97 aa16.08■□□□□ 0.16
CLN5-201ENST00000377453 APOHP02749 345 aaPredicted RBP16.08■□□□□ 0.16
CLN5-201ENST00000377453 LINC00614P0C842 121 aa16.08■□□□□ 0.16
CLN5-201ENST00000377453 ARF6P62330 175 aa16.08■□□□□ 0.16
CLN5-201ENST00000377453 IGHV3OR16-8A0A075B7F1 116 aa16.07■□□□□ 0.16
CLN5-201ENST00000377453 CCL25O15444 150 aa16.07■□□□□ 0.16
CLN5-201ENST00000377453 APOBEC3AP31941 199 aaPredicted RBP16.07■□□□□ 0.16
CLN5-201ENST00000377453 FOXE3Q13461 319 aa16.07■□□□□ 0.16
CLN5-201ENST00000377453 CHD8Q9HCK8 2581 aa16.07■□□□□ 0.16
CLN5-201ENST00000377453 IL4P05112 153 aa16.07■□□□□ 0.16
CLN5-201ENST00000377453 FCGR2BP31994 310 aaPredicted RBP16.07■□□□□ 0.16
CLN5-201ENST00000377453 CRIP1P50238 77 aa16.07■□□□□ 0.16
CLN5-201ENST00000377453 NGBQ9NPG2 151 aa16.07■□□□□ 0.16
CLN5-201ENST00000377453 FAM106CPP0CH98 169 aa16.06■□□□□ 0.16
CLN5-201ENST00000377453 FAM106AQ4KMX7 169 aa16.06■□□□□ 0.16
CLN5-201ENST00000377453 NPIPB6E9PJ23 425 aa16.06■□□□□ 0.16
CLN5-201ENST00000377453 HTR1DP28221 377 aa16.06■□□□□ 0.16
CLN5-201ENST00000377453 FXYD7P58549 80 aa16.06■□□□□ 0.16
CLN5-201ENST00000377453 TRBV19A0A075B6N1 114 aa16.05■□□□□ 0.16
CLN5-201ENST00000377453 CD3EP07766 207 aa16.05■□□□□ 0.16
CLN5-201ENST00000377453 TCTAP57738 103 aa16.05■□□□□ 0.16
CLN5-201ENST00000377453 CT83Q5H943 113 aa16.05■□□□□ 0.16
CLN5-201ENST00000377453 RBM14Q96PK6 669 aaKnown RBP16.05■□□□□ 0.16
CLN5-201ENST00000377453 ANKHD1Q8IWZ3 2542 aaKnown RBP16.05■□□□□ 0.16
CLN5-201ENST00000377453 IGFL4Q6B9Z1 124 aa16.05■□□□□ 0.16
CLN5-201ENST00000377453 SMIM12Q96EX1 92 aa16.05■□□□□ 0.16
CLN5-201ENST00000377453 SCNM1Q9BWG6 230 aa16.05■□□□□ 0.16
CLN5-201ENST00000377453 HLA-DRB1P01911 266 aa16.04■□□□□ 0.16
CLN5-201ENST00000377453 RBPJQ06330 500 aa16.04■□□□□ 0.16
CLN5-201ENST00000377453 SIGLEC15Q6ZMC9 328 aa16.04■□□□□ 0.16
CLN5-201ENST00000377453 MUC15Q8N387 334 aa16.04■□□□□ 0.16
CLN5-201ENST00000377453 CACNA1BQ00975 2339 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms