RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 FAM162BQ5T6X4 162 aa20.05■□□□□ 0.8
C9orf40-201ENST00000376854 MUC15Q8N387 334 aa20.05■□□□□ 0.8
C9orf40-201ENST00000376854 ZZEF1O43149 2961 aa20.05■□□□□ 0.8
C9orf40-201ENST00000376854 IGLV2-11P01706 119 aa20.05■□□□□ 0.8
C9orf40-201ENST00000376854 TFPI2P48307 235 aa20.05■□□□□ 0.8
C9orf40-201ENST00000376854 ONECUT1Q9UBC0 465 aa20.05■□□□□ 0.8
C9orf40-201ENST00000376854 FAM231BA6NCW3 169 aa20.04■□□□□ 0.8
C9orf40-201ENST00000376854 FAM90A27PA6NNH2 459 aa20.04■□□□□ 0.8
C9orf40-201ENST00000376854 KIR3DL3Q8N743 410 aa20.04■□□□□ 0.8
C9orf40-201ENST00000376854 M0QZ24 198 aa20.04■□□□□ 0.8
C9orf40-201ENST00000376854 GAGE1Q13065 139 aa20.04■□□□□ 0.8
C9orf40-201ENST00000376854 TRAV9-2A0A087WT02 112 aa20.03■□□□□ 0.8
C9orf40-201ENST00000376854 TIMM23O14925 209 aa20.03■□□□□ 0.8
C9orf40-201ENST00000376854 SRSF8Q9BRL6 282 aaKnown RBP20.03■□□□□ 0.8
C9orf40-201ENST00000376854 CLEC5AQ9NY25 188 aa20.03■□□□□ 0.8
C9orf40-201ENST00000376854 SH2D7A6NKC9 451 aaPredicted RBP20.03■□□□□ 0.8
C9orf40-201ENST00000376854 K7EIM0 57 aa20.03■□□□□ 0.8
C9orf40-201ENST00000376854 Q71RC1 249 aaPredicted RBP20.03■□□□□ 0.8
C9orf40-201ENST00000376854 LAMTOR2Q9Y2Q5 125 aa20.03■□□□□ 0.8
C9orf40-201ENST00000376854 GOLT1BQ9Y3E0 138 aa20.03■□□□□ 0.8
C9orf40-201ENST00000376854 HOXB4P17483 251 aaPredicted RBP20.02■□□□□ 0.8
C9orf40-201ENST00000376854 ANKHD1Q8IWZ3 2542 aaKnown RBP20.02■□□□□ 0.8
C9orf40-201ENST00000376854 CHEK1O14757 476 aa20.02■□□□□ 0.79
C9orf40-201ENST00000376854 SIAH2O43255 324 aa20.02■□□□□ 0.79
C9orf40-201ENST00000376854 LDLRAD2Q5SZI1 272 aa20.02■□□□□ 0.79
C9orf40-201ENST00000376854 SHANK2-AS3Q9BTD1 123 aa20.02■□□□□ 0.79
C9orf40-201ENST00000376854 TRBV19A0A075B6N1 114 aa20.01■□□□□ 0.79
C9orf40-201ENST00000376854 FAM120AOSQ5T036 256 aa20.01■□□□□ 0.79
C9orf40-201ENST00000376854 BPIFA4PQ86YQ2 179 aa20.01■□□□□ 0.79
C9orf40-201ENST00000376854 CHCHD1Q96BP2 118 aaKnown RBP20.01■□□□□ 0.79
C9orf40-201ENST00000376854 TMEM70Q9BUB7 260 aa20.01■□□□□ 0.79
C9orf40-201ENST00000376854 NBASA2RRP1 2371 aa20.01■□□□□ 0.79
C9orf40-201ENST00000376854 NPSP0C0P6 89 aa20.01■□□□□ 0.79
C9orf40-201ENST00000376854 ZNF672Q499Z4 452 aaPredicted RBP20.01■□□□□ 0.79
C9orf40-201ENST00000376854 SPATA12Q7Z6I5 190 aa20.01■□□□□ 0.79
C9orf40-201ENST00000376854 C17orf77Q96MU5 243 aa20.01■□□□□ 0.79
C9orf40-201ENST00000376854 ABCA1O95477 2261 aa20■□□□□ 0.79
C9orf40-201ENST00000376854 LOC102724200A0A096LPH7 203 aaPredicted RBP20■□□□□ 0.79
C9orf40-201ENST00000376854 LIPFP07098 398 aa20■□□□□ 0.79
C9orf40-201ENST00000376854 TSPOP30536 169 aa20■□□□□ 0.79
C9orf40-201ENST00000376854 OR4F17Q8NGA8 305 aa20■□□□□ 0.79
C9orf40-201ENST00000376854 C20orf202A1L168 122 aa19.99■□□□□ 0.79
C9orf40-201ENST00000376854 H3BRN7 92 aa19.99■□□□□ 0.79
C9orf40-201ENST00000376854 STPG4Q8N801 248 aa19.99■□□□□ 0.79
C9orf40-201ENST00000376854 ABCA4P78363 2273 aa19.99■□□□□ 0.79
C9orf40-201ENST00000376854 IGHV1-24A0A0C4DH33 117 aa19.99■□□□□ 0.79
C9orf40-201ENST00000376854 TRBV6-1A0A0K0K1D8 114 aa19.99■□□□□ 0.79
C9orf40-201ENST00000376854 HAX1O00165 279 aa19.99■□□□□ 0.79
C9orf40-201ENST00000376854 C16orf54Q6UWD8 224 aa19.99■□□□□ 0.79
C9orf40-201ENST00000376854 ZC2HC1AQ96GY0 325 aa19.98■□□□□ 0.79
C9orf40-201ENST00000376854 NDFIP1Q9BT67 221 aa19.98■□□□□ 0.79
C9orf40-201ENST00000376854 RNF24Q9Y225 148 aa19.98■□□□□ 0.79
C9orf40-201ENST00000376854 HILPDAQ9Y5L2 63 aa19.98■□□□□ 0.79
C9orf40-201ENST00000376854 ATRXP46100 2492 aa19.98■□□□□ 0.79
C9orf40-201ENST00000376854 APOHP02749 345 aaPredicted RBP19.98■□□□□ 0.79
C9orf40-201ENST00000376854 IGLL1P15814 213 aa19.98■□□□□ 0.79
C9orf40-201ENST00000376854 HTR1DP28221 377 aa19.98■□□□□ 0.79
C9orf40-201ENST00000376854 NBR2O15453 112 aa19.97■□□□□ 0.79
C9orf40-201ENST00000376854 LINC00614P0C842 121 aa19.97■□□□□ 0.79
C9orf40-201ENST00000376854 CDSNQ15517 529 aa19.97■□□□□ 0.79
C9orf40-201ENST00000376854 TMEM75Q8N9X5 138 aa19.97■□□□□ 0.79
C9orf40-201ENST00000376854 ZFP30Q9Y2G7 519 aa19.97■□□□□ 0.79
C9orf40-201ENST00000376854 ZNF785A8K8V0 405 aa19.97■□□□□ 0.79
C9orf40-201ENST00000376854 SIGLEC15Q6ZMC9 328 aa19.97■□□□□ 0.79
C9orf40-201ENST00000376854 ZNF491Q8N8L2 437 aa19.97■□□□□ 0.79
C9orf40-201ENST00000376854 LY6G5BQ8NDX9 201 aa19.97■□□□□ 0.79
C9orf40-201ENST00000376854 MRPS16Q9Y3D3 137 aaKnown RBP19.97■□□□□ 0.79
C9orf40-201ENST00000376854 HLA-DRB1P01911 266 aa19.96■□□□□ 0.79
C9orf40-201ENST00000376854 IL4P05112 153 aa19.96■□□□□ 0.79
C9orf40-201ENST00000376854 RNF125Q96EQ8 232 aa19.96■□□□□ 0.79
C9orf40-201ENST00000376854 DPM3Q9P2X0 92 aa19.96■□□□□ 0.79
C9orf40-201ENST00000376854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.96■□□□□ 0.79
C9orf40-201ENST00000376854 TMEM190Q8WZ59 177 aa19.96■□□□□ 0.79
C9orf40-201ENST00000376854 ASCL2Q99929 193 aa19.96■□□□□ 0.79
C9orf40-201ENST00000376854 K7EQM0 130 aa19.95■□□□□ 0.78
C9orf40-201ENST00000376854 CRXO43186 299 aaPredicted RBP19.95■□□□□ 0.78
C9orf40-201ENST00000376854 LEPROTL1O95214 131 aa19.95■□□□□ 0.78
C9orf40-201ENST00000376854 PRB4P10163 310 aaPredicted RBP19.95■□□□□ 0.78
C9orf40-201ENST00000376854 ARF6P62330 175 aa19.95■□□□□ 0.78
C9orf40-201ENST00000376854 LINC00173Q6ZV60 143 aa19.95■□□□□ 0.78
C9orf40-201ENST00000376854 IGFBPL1Q8WX77 278 aa19.95■□□□□ 0.78
C9orf40-201ENST00000376854 KLF17Q5JT82 389 aaPredicted RBP19.94■□□□□ 0.78
C9orf40-201ENST00000376854 CYB5R2Q6BCY4 276 aa19.94■□□□□ 0.78
C9orf40-201ENST00000376854 LYPD1Q8N2G4 141 aa19.94■□□□□ 0.78
C9orf40-201ENST00000376854 PSG8Q9UQ74 426 aa19.94■□□□□ 0.78
C9orf40-201ENST00000376854 OVOL3O00110 214 aa19.94■□□□□ 0.78
C9orf40-201ENST00000376854 LY6HO94772 140 aa19.94■□□□□ 0.78
C9orf40-201ENST00000376854 CFHR4Q92496 578 aa19.94■□□□□ 0.78
C9orf40-201ENST00000376854 S4R3C0 116 aa19.94■□□□□ 0.78
C9orf40-201ENST00000376854 HRNRQ86YZ3 2850 aaPredicted RBP19.93■□□□□ 0.78
C9orf40-201ENST00000376854 A0A1B0GUT8 65 aa19.93■□□□□ 0.78
C9orf40-201ENST00000376854 OR4C46A6NHA9 309 aa19.93■□□□□ 0.78
C9orf40-201ENST00000376854 SYS1-DBNDD2H3BUS1 97 aa19.93■□□□□ 0.78
C9orf40-201ENST00000376854 FCGR2BP31994 310 aaPredicted RBP19.93■□□□□ 0.78
C9orf40-201ENST00000376854 OR11H6Q8NGC7 330 aa19.93■□□□□ 0.78
C9orf40-201ENST00000376854 HINT1P49773 126 aaPredicted RBP19.93■□□□□ 0.78
C9orf40-201ENST00000376854 PSG3Q16557 428 aa19.93■□□□□ 0.78
C9orf40-201ENST00000376854 C1RLQ9NZP8 487 aa19.93■□□□□ 0.78
C9orf40-201ENST00000376854 CCL21O00585 134 aa19.92■□□□□ 0.78
C9orf40-201ENST00000376854 ZNF138P52744 262 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms