RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 NCOR1O75376 2440 aa14.09□□□□□ -0.15
PTPRU-202ENST00000373779 A0A0G2JNJ9 132 aa14.09□□□□□ -0.15
PTPRU-202ENST00000373779 RNASE4P34096 147 aaKnown RBP14.09□□□□□ -0.15
PTPRU-202ENST00000373779 ZNF672Q499Z4 452 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-202ENST00000373779 TEX43Q6ZNM6 134 aa14.09□□□□□ -0.15
PTPRU-202ENST00000373779 Q9UFV3 132 aa14.09□□□□□ -0.15
PTPRU-202ENST00000373779 SNRPD3P62318 126 aaKnown RBP14.09□□□□□ -0.15
PTPRU-202ENST00000373779 MYO7BQ6PIF6 2116 aa14.09□□□□□ -0.15
PTPRU-202ENST00000373779 IGLV1-44P01699 117 aa14.08□□□□□ -0.15
PTPRU-202ENST00000373779 PRR20EP86478 221 aa14.08□□□□□ -0.15
PTPRU-202ENST00000373779 PRR20CP86479 221 aa14.08□□□□□ -0.15
PTPRU-202ENST00000373779 PRR20DP86480 221 aa14.08□□□□□ -0.15
PTPRU-202ENST00000373779 PRR20BP86481 221 aa14.08□□□□□ -0.15
PTPRU-202ENST00000373779 PRR20AP86496 221 aa14.08□□□□□ -0.15
PTPRU-202ENST00000373779 CT83Q5H943 113 aa14.08□□□□□ -0.15
PTPRU-202ENST00000373779 MCRIP2Q9BUT9 160 aaKnown RBP14.08□□□□□ -0.15
PTPRU-202ENST00000373779 KLF17Q5JT82 389 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-202ENST00000373779 Q8TCH9 128 aa14.08□□□□□ -0.16
PTPRU-202ENST00000373779 C11orf1Q9H5F2 150 aa14.08□□□□□ -0.16
PTPRU-202ENST00000373779 IGKV3-20P01619 116 aa14.08□□□□□ -0.16
PTPRU-202ENST00000373779 PAPPA-AS1Q5QFB9 102 aa14.08□□□□□ -0.16
PTPRU-202ENST00000373779 VKORC1Q9BQB6 163 aa14.08□□□□□ -0.16
PTPRU-202ENST00000373779 PAX1P15863 534 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 FXYD7P58549 80 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 CFHR2P36980 270 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 DENND4AQ7Z401 1863 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 GVINP1Q7Z2Y8 2422 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 C11orf53Q8IXP5 236 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 ZNF418Q8TF45 676 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-202ENST00000373779 SMPXQ9UHP9 88 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 FAM231BA6NCW3 169 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 LINC01559Q495D7 138 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 SHANK2-AS3Q9BTD1 123 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 MEGF9Q9H1U4 602 aa14.07□□□□□ -0.16
PTPRU-202ENST00000373779 CEACAM4O75871 244 aa14.06□□□□□ -0.16
PTPRU-202ENST00000373779 THBDP07204 575 aa14.06□□□□□ -0.16
PTPRU-202ENST00000373779 ARMS2P0C7Q2 107 aa14.06□□□□□ -0.16
PTPRU-202ENST00000373779 KLRD1Q13241 179 aa14.06□□□□□ -0.16
PTPRU-202ENST00000373779 C3orf36Q3SXR2 165 aa14.06□□□□□ -0.16
PTPRU-202ENST00000373779 SAMD5Q5TGI4 173 aa14.06□□□□□ -0.16
PTPRU-202ENST00000373779 Q6ZS92 163 aa14.06□□□□□ -0.16
PTPRU-202ENST00000373779 Q8TAT8 98 aa14.06□□□□□ -0.16
PTPRU-202ENST00000373779 NPSP0C0P6 89 aa14.05□□□□□ -0.16
PTPRU-202ENST00000373779 ORMDL2Q53FV1 153 aa14.05□□□□□ -0.16
PTPRU-202ENST00000373779 A0A0G2JLM5 398 aa14.05□□□□□ -0.16
PTPRU-202ENST00000373779 SMAGPQ0VAQ4 97 aa14.05□□□□□ -0.16
PTPRU-202ENST00000373779 C5orf64Q2M2E5 130 aa14.05□□□□□ -0.16
PTPRU-202ENST00000373779 TRAV21A0A0B4J279 112 aa14.05□□□□□ -0.16
PTPRU-202ENST00000373779 APOMO95445 188 aa14.05□□□□□ -0.16
PTPRU-202ENST00000373779 IFI27P40305 119 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-202ENST00000373779 AMN1Q8IY45 258 aa14.05□□□□□ -0.16
PTPRU-202ENST00000373779 RCHY1Q96PM5 261 aa14.05□□□□□ -0.16
PTPRU-202ENST00000373779 NAA38Q9BRA0 125 aaKnown RBP14.05□□□□□ -0.16
PTPRU-202ENST00000373779 POU2AF1Q16633 256 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 ATP5J2P56134 94 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 CD5LO43866 347 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 MMP23AO75900 390 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 RIPPLY3P57055 190 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 WT1-ASQ06250 92 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 C15orf32Q32M92 178 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 SRSF8Q9BRL6 282 aaKnown RBP14.04□□□□□ -0.16
PTPRU-202ENST00000373779 ZNF256Q9Y2P7 627 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-202ENST00000373779 CNOT1A5YKK6 2376 aaKnown RBP14.04□□□□□ -0.16
PTPRU-202ENST00000373779 LAGE3Q14657 143 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 TMEM75Q8N9X5 138 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 DDB2Q92466 427 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 CHTOPQ9Y3Y2 248 aaKnown RBP14.04□□□□□ -0.16
PTPRU-202ENST00000373779 LSM4Q9Y4Z0 139 aaKnown RBP14.04□□□□□ -0.16
PTPRU-202ENST00000373779 IGHV3-11P01762 117 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 GTSCR1Q86UQ5 136 aa14.04□□□□□ -0.16
PTPRU-202ENST00000373779 TMEM131Q92545 1883 aa14.03□□□□□ -0.16
PTPRU-202ENST00000373779 KIR2DL5BA0A0G2JN68 375 aa14.03□□□□□ -0.16
PTPRU-202ENST00000373779 KIR2DL5BA0A0G2JPC4 375 aa14.03□□□□□ -0.16
PTPRU-202ENST00000373779 TMEM155Q4W5P6 130 aa14.03□□□□□ -0.16
PTPRU-202ENST00000373779 KIR2DL5AQ8N109 375 aa14.03□□□□□ -0.16
PTPRU-202ENST00000373779 TDGF1P13385 188 aa14.03□□□□□ -0.16
PTPRU-202ENST00000373779 BEX4Q9NWD9 120 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-202ENST00000373779 YLPM1P49750 1951 aaKnown RBP14.03□□□□□ -0.16
PTPRU-202ENST00000373779 SRRM4A7MD48 611 aaKnown RBP14.02□□□□□ -0.16
PTPRU-202ENST00000373779 SAMD13Q5VXD3 122 aa14.02□□□□□ -0.16
PTPRU-202ENST00000373779 SPACA3Q8IXA5 215 aa14.02□□□□□ -0.16
PTPRU-202ENST00000373779 GLMPQ8WWB7 406 aa14.02□□□□□ -0.16
PTPRU-202ENST00000373779 VMO1Q7Z5L0 202 aa14.02□□□□□ -0.16
PTPRU-202ENST00000373779 A0A1B0GV72 72 aa14.02□□□□□ -0.17
PTPRU-202ENST00000373779 GAGE1Q13065 139 aa14.02□□□□□ -0.17
PTPRU-202ENST00000373779 UNQ6494/PRO21346Q6UXR6 183 aa14.02□□□□□ -0.17
PTPRU-202ENST00000373779 BCL6BQ8N143 479 aaPredicted RBP14.02□□□□□ -0.17
PTPRU-202ENST00000373779 CNTFRP26992 372 aa14.02□□□□□ -0.17
PTPRU-202ENST00000373779 TEX36Q5VZQ5 186 aa14.02□□□□□ -0.17
PTPRU-202ENST00000373779 CRIP3Q6Q6R5 217 aa14.02□□□□□ -0.17
PTPRU-202ENST00000373779 SIGLEC15Q6ZMC9 328 aa14.02□□□□□ -0.17
PTPRU-202ENST00000373779 ZNF479Q96JC4 524 aa14.02□□□□□ -0.17
PTPRU-202ENST00000373779 DUX5Q96PT3 197 aa14.02□□□□□ -0.17
PTPRU-202ENST00000373779 PDE6HQ13956 83 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 CCL19Q99731 98 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 SMKR1H3BMG3 65 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 H7C1H1 209 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 IGLV2-14P01704 120 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 ASPHD1Q5U4P2 390 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 FXYD5Q96DB9 178 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms