RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 F11RQ9Y624 299 aaKnown RBP9.26□□□□□ -0.93
SMARCA1-201ENST00000371121 A1L4Q6 167 aa9.26□□□□□ -0.93
SMARCA1-201ENST00000371121 SCGB1A1P11684 91 aa9.26□□□□□ -0.93
SMARCA1-201ENST00000371121 PVRIGQ6DKI7 326 aa9.26□□□□□ -0.93
SMARCA1-201ENST00000371121 ADTRPQ96IZ2 230 aa9.26□□□□□ -0.93
SMARCA1-201ENST00000371121 C17orf77Q96MU5 243 aa9.26□□□□□ -0.93
SMARCA1-201ENST00000371121 GAGE12HA6NDE8 117 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 PATE3B3GLJ2 98 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 CHEK1O14757 476 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 TIMM8AO60220 97 aaPredicted RBP9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 RPRMLQ8N4K4 120 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 SPAG8Q99932 426 aaPredicted RBP9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 D6R8Y8 96 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 CRYGCP07315 174 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 MBNL2Q5VZF2 373 aaKnown RBP9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 ZNF493Q6ZR52 646 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 ZADH2Q8N4Q0 377 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 ZMAT4Q9H898 229 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 ORM2P19652 201 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 ZNF833PQ6ZTB9 187 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 OR9G4Q8NGQ1 327 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 ATP6V0BQ99437 205 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 MRPL20Q9BYC9 149 aaKnown RBP9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 DEFB127Q9H1M4 99 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 AGRNO00468 2067 aa9.25□□□□□ -0.93
SMARCA1-201ENST00000371121 LOC389332A0A1B0GUA5 103 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 M0R296 226 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 ZNF562Q6V9R5 426 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 MDS2Q8NDY4 140 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 IGHV1-18A0A0C4DH31 117 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 TMEM213A2RRL7 107 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 MEOX1P50221 254 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 ATP5G2Q06055 141 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 WFDC3Q8IUB2 231 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 SIGMAR1Q99720 223 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 VGLL1Q99990 258 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 CADP27708 2225 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 A0A1W2PPI3 338 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 IGLV1-44P01699 117 aa9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 CD300EQ496F6 205 aaPredicted RBP9.24□□□□□ -0.93
SMARCA1-201ENST00000371121 A0A1B0GUT8 65 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 RAB9AP51151 201 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 PEAR1Q5VY43 1037 aaPredicted RBP9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 INO80CQ6PI98 192 aaPredicted RBP9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 ZNF788Q6ZQV5 615 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 MTURNQ8N3F0 131 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 hADV38S2A0JD32 116 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 NDUFS7O75251 213 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 RPL24P83731 157 aaKnown RBP9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 AMN1Q8IY45 258 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 OR1L4Q8NGR5 311 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 FLYWCH2Q96CP2 140 aaKnown RBP9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 E9PLD3 99 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 COL8A1P27658 744 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 ARPC1AQ92747 370 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 GAFA1Q96PS6 74 aa9.23□□□□□ -0.93
SMARCA1-201ENST00000371121 TRAV26-1A0A087WT03 109 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 FBLL1A6NHQ2 334 aaKnown RBP9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 SMKR1H3BMG3 65 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 PRRG2O14669 202 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 WT1P19544 449 aaPredicted RBP9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 NMUP48645 174 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 ATP5IP56385 69 aaPredicted RBP9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 OR4X2Q8NGF9 303 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 SRSF12Q8WXF0 261 aaKnown RBP9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 CACNA1GO43497 2377 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 Q6ZT83 130 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 MOGAT3Q86VF5 341 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 BCL6BQ8N143 479 aaPredicted RBP9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 DKK4Q9UBT3 224 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 B4GALT7Q9UBV7 327 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 INTS1Q8N201 2190 aaKnown RBP9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 IGHV3-21A0A0B4J1V1 117 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 GOLT1AQ6ZVE7 132 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 FAM216BQ8N7L0 139 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 C8orf49Q96NF6 230 aa9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 RPUSD1Q9UJJ7 312 aaKnown RBP9.22□□□□□ -0.93
SMARCA1-201ENST00000371121 PRR33A8MZF0 331 aa9.21□□□□□ -0.93
SMARCA1-201ENST00000371121 MAPKAPK5-AS1Q8N8E1 139 aa9.21□□□□□ -0.93
SMARCA1-201ENST00000371121 PIFOQ8TCI5 191 aa9.21□□□□□ -0.93
SMARCA1-201ENST00000371121 H3BMG7 143 aa9.21□□□□□ -0.94
SMARCA1-201ENST00000371121 FABP2P12104 132 aa9.21□□□□□ -0.94
SMARCA1-201ENST00000371121 KIR2DL2P43627 348 aaPredicted RBP9.21□□□□□ -0.94
SMARCA1-201ENST00000371121 ABHD17BQ5VST6 288 aa9.21□□□□□ -0.94
SMARCA1-201ENST00000371121 PRSS3P2Q8NHM4 247 aa9.21□□□□□ -0.94
SMARCA1-201ENST00000371121 HARBI1Q96MB7 349 aa9.21□□□□□ -0.94
SMARCA1-201ENST00000371121 A0A1W2PRD5 423 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 A0A1W2PRF3 423 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 A0A1W2PRM7 423 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 LINC01546A6NGU7 62 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 LINC01548A6NM66 108 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 NPYP01303 97 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 FTH1P19P0C7X4 201 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 GATA3P23771 443 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 ODF1Q14990 250 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 AMTNQ6UX39 209 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 CDIP1Q9H305 208 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms