RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 UBE2L3P68036 154 aaKnown RBP16.72■□□□□ 0.27
HOXA4-201ENST00000360046 TM4SF20Q53R12 229 aa16.72■□□□□ 0.27
HOXA4-201ENST00000360046 STXBP6Q8NFX7 210 aa16.72■□□□□ 0.27
HOXA4-201ENST00000360046 ZNF503Q96F45 646 aa16.72■□□□□ 0.27
HOXA4-201ENST00000360046 NARS2Q96I59 477 aaKnown RBP16.72■□□□□ 0.27
HOXA4-201ENST00000360046 PAXXQ9BUH6 204 aa16.72■□□□□ 0.27
HOXA4-201ENST00000360046 OR51M1Q9H341 326 aa16.72■□□□□ 0.27
HOXA4-201ENST00000360046 UFC1Q9Y3C8 167 aa16.72■□□□□ 0.27
HOXA4-201ENST00000360046 APOHP02749 345 aaPredicted RBP16.71■□□□□ 0.27
HOXA4-201ENST00000360046 C1QL4Q86Z23 238 aa16.71■□□□□ 0.27
HOXA4-201ENST00000360046 MARC2Q969Z3 335 aa16.71■□□□□ 0.27
HOXA4-201ENST00000360046 RNF24Q9Y225 148 aa16.71■□□□□ 0.27
HOXA4-201ENST00000360046 KLF5Q13887 457 aaPredicted RBP16.7■□□□□ 0.26
HOXA4-201ENST00000360046 NDUFA11Q86Y39 141 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 OR8I2Q8N0Y5 310 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 FBN1P35555 2871 aaKnown RBP16.7■□□□□ 0.26
HOXA4-201ENST00000360046 ADARB2-AS1A8MUL3 147 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 CCL24O00175 119 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 GP9P14770 177 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 PSMB3P49720 205 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 HAGHQ16775 308 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 REC114Q7Z4M0 266 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 BPIFA4PQ86YQ2 179 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 SUN5Q8TC36 379 aa16.7■□□□□ 0.26
HOXA4-201ENST00000360046 K7EMT4 169 aa16.69■□□□□ 0.26
HOXA4-201ENST00000360046 LGALS9O00182 355 aa16.69■□□□□ 0.26
HOXA4-201ENST00000360046 BUB3O43684 328 aa16.69■□□□□ 0.26
HOXA4-201ENST00000360046 SNRPCP09234 159 aaKnown RBP16.69■□□□□ 0.26
HOXA4-201ENST00000360046 TMEM167BQ9NRX6 74 aa16.69■□□□□ 0.26
HOXA4-201ENST00000360046 WNK1Q9H4A3 2382 aa16.69■□□□□ 0.26
HOXA4-201ENST00000360046 IFNA1P01562 189 aa16.68■□□□□ 0.26
HOXA4-201ENST00000360046 FHL3Q13643 280 aa16.68■□□□□ 0.26
HOXA4-201ENST00000360046 EIF5A2Q9GZV4 153 aaKnown RBP16.68■□□□□ 0.26
HOXA4-201ENST00000360046 TMEM14CQ9P0S9 112 aa16.68■□□□□ 0.26
HOXA4-201ENST00000360046 U3KQE9 123 aa16.68■□□□□ 0.26
HOXA4-201ENST00000360046 IGHV7-4-1A0A0J9YVY3 117 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 A8MWP6 167 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 RPL7P18124 248 aaKnown RBP16.67■□□□□ 0.26
HOXA4-201ENST00000360046 UBE2G2P60604 165 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 FXYD5Q96DB9 178 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 TMEM213A2RRL7 107 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 EDN2P20800 178 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 PPT1P50897 306 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 GUK1Q16774 197 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 C1orf194Q5T5A4 169 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 C12orf54Q6X4T0 127 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 OR4F17Q8NGA8 305 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 BLNKQ8WV28 456 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 DLX4Q92988 240 aaPredicted RBP16.67■□□□□ 0.26
HOXA4-201ENST00000360046 GRAMD2BQ96HH9 432 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 OR4F4Q96R69 305 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 MANBALQ9NQG1 85 aa16.67■□□□□ 0.26
HOXA4-201ENST00000360046 A0A1W2PS18 150 aa16.66■□□□□ 0.26
HOXA4-201ENST00000360046 RBFOX3A6NFN3 312 aa16.66■□□□□ 0.26
HOXA4-201ENST00000360046 CITED1Q99966 193 aa16.66■□□□□ 0.26
HOXA4-201ENST00000360046 RAB19A4D1S5 217 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 H3BTX0 84 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 PAGE4O60829 102 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 BCL2P10415 239 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 C3orf56Q8N813 242 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 RARRES2Q99969 163 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 RHPN1-AS1Q9BWJ2 59 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 TMEM231Q9H6L2 316 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 SMPXQ9UHP9 88 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 C16orf54Q6UWD8 224 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 GPR82Q96P67 336 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 PEMTQ9UBM1 199 aa16.65■□□□□ 0.26
HOXA4-201ENST00000360046 H3BQ15 152 aa16.64■□□□□ 0.25
HOXA4-201ENST00000360046 MRPS12O15235 138 aaKnown RBP16.64■□□□□ 0.25
HOXA4-201ENST00000360046 NBEAP1P0C6P0 100 aa16.64■□□□□ 0.25
HOXA4-201ENST00000360046 HIST1H1EP10412 219 aaKnown RBP16.64■□□□□ 0.25
HOXA4-201ENST00000360046 ATF4P18848 351 aaPredicted RBP16.64■□□□□ 0.25
HOXA4-201ENST00000360046 GALR1P47211 349 aa16.64■□□□□ 0.25
HOXA4-201ENST00000360046 SRSF3P84103 164 aaKnown RBP16.64■□□□□ 0.25
HOXA4-201ENST00000360046 PMS2P11Q13670 270 aa16.64■□□□□ 0.25
HOXA4-201ENST00000360046 CST9LP1Q5W188 147 aa16.64■□□□□ 0.25
HOXA4-201ENST00000360046 UQCC3Q6UW78 93 aa16.64■□□□□ 0.25
HOXA4-201ENST00000360046 OR9G4Q8NGQ1 327 aa16.64■□□□□ 0.25
HOXA4-201ENST00000360046 LOC102723971A0A1B0GUV8 181 aa16.63■□□□□ 0.25
HOXA4-201ENST00000360046 C2orf70A6NJV1 201 aa16.63■□□□□ 0.25
HOXA4-201ENST00000360046 CHEK1O14757 476 aa16.63■□□□□ 0.25
HOXA4-201ENST00000360046 IGLC2P0DOY2 106 aa16.63■□□□□ 0.25
HOXA4-201ENST00000360046 BMI1P35226 326 aa16.63■□□□□ 0.25
HOXA4-201ENST00000360046 RXFP4Q8TDU9 374 aa16.63■□□□□ 0.25
HOXA4-201ENST00000360046 ELOVL1Q9BW60 279 aa16.63■□□□□ 0.25
HOXA4-201ENST00000360046 ZNF586Q9NXT0 402 aa16.63■□□□□ 0.25
HOXA4-201ENST00000360046 YTHDF2Q9Y5A9 579 aaKnown RBP16.63■□□□□ 0.25
HOXA4-201ENST00000360046 MYCNOSP40205 109 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 SIGLEC15Q6ZMC9 328 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 GLMPQ8WWB7 406 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 ZNF747Q9BV97 191 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 TREM1Q9NP99 234 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 VAX2Q9UIW0 290 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 SELENOKQ9Y6D0 94 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 ZNF785A8K8V0 405 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 CBLN1P23435 193 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 ICAM4Q14773 271 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 PEA15Q15121 130 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 ZNF506Q5JVG8 444 aa16.62■□□□□ 0.25
HOXA4-201ENST00000360046 SMAD5-AS1Q9Y6J3 95 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms