RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
SVIP-201ENST00000354193 C1QL4Q86Z23 238 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 METTL26Q96S19 204 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 PARD6GQ9BYG4 376 aaPredicted RBP8.73□□□□□ -1.01
SVIP-201ENST00000354193 PPP1R14DQ9NXH3 145 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 NAGKQ9UJ70 344 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 GATCO43716 136 aaKnown RBP8.72□□□□□ -1.01
SVIP-201ENST00000354193 HLA-DRB1P01911 266 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 CXCL1P09341 107 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 KIAA1644Q3SXP7 199 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 TMEM116Q8NCL8 245 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 FANCD2OSQ96PS1 177 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 TRAV30A0A087WSZ9 112 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 PEX7O00628 323 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 PLA2G2AP14555 144 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 IER3P46695 156 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 RPL19P84098 196 aaKnown RBP8.72□□□□□ -1.01
SVIP-201ENST00000354193 C19orf24Q9BVV8 132 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 IGKV1D-37A0A075B6S9 117 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 I3L2K1 104 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 IBA57Q5T440 356 aaKnown RBP8.72□□□□□ -1.01
SVIP-201ENST00000354193 CYB5R2Q6BCY4 276 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 DUX3Q96PT4 197 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 AARDQ4LEZ3 155 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 C10orf99Q6UWK7 81 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 SLC25A2Q9BXI2 301 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 DMRT1Q9Y5R6 373 aa8.72□□□□□ -1.01
SVIP-201ENST00000354193 OR5R1Q8NH85 324 aa8.71□□□□□ -1.01
SVIP-201ENST00000354193 GLMPQ8WWB7 406 aa8.71□□□□□ -1.01
SVIP-201ENST00000354193 SFRP2Q96HF1 295 aa8.71□□□□□ -1.01
SVIP-201ENST00000354193 HTN1P15515 57 aa8.71□□□□□ -1.02
SVIP-201ENST00000354193 LINC01551Q86U37 167 aa8.71□□□□□ -1.02
SVIP-201ENST00000354193 NPBQ8NG41 125 aa8.71□□□□□ -1.02
SVIP-201ENST00000354193 C16orf92Q96LL3 132 aa8.71□□□□□ -1.02
SVIP-201ENST00000354193 NAT8BQ9UHF3 227 aa8.71□□□□□ -1.02
SVIP-201ENST00000354193 CRYGBP07316 175 aa8.71□□□□□ -1.02
SVIP-201ENST00000354193 RPEL1Q2QD12 228 aa8.71□□□□□ -1.02
SVIP-201ENST00000354193 CTDSP1Q9GZU7 261 aa8.71□□□□□ -1.02
SVIP-201ENST00000354193 NDUFA3O95167 84 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 FSTL3O95633 263 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 RPL7P18124 248 aaKnown RBP8.7□□□□□ -1.02
SVIP-201ENST00000354193 HLA-DMBP28068 263 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 TOMM20LQ6UXN7 152 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 C5orf56Q8N8D9 126 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 Q8TAT8 98 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 ZNF331Q9NQX6 463 aaPredicted RBP8.7□□□□□ -1.02
SVIP-201ENST00000354193 IMMP2LQ96T52 175 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 TRAPPC1Q9Y5R8 145 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 ZNF705DP0CH99 300 aaPredicted RBP8.7□□□□□ -1.02
SVIP-201ENST00000354193 ZNF705BP0CI00 300 aaPredicted RBP8.7□□□□□ -1.02
SVIP-201ENST00000354193 ZNF491Q8N8L2 437 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 OR4X2Q8NGF9 303 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 OR2D3Q8NGH3 330 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 IGKV2-40A0A087WW87 121 aaPredicted RBP8.7□□□□□ -1.02
SVIP-201ENST00000354193 COLCA2A8K830 154 aa8.7□□□□□ -1.02
SVIP-201ENST00000354193 ZNF705FA8MVS1 300 aaPredicted RBP8.7□□□□□ -1.02
SVIP-201ENST00000354193 IGKV2D-40P01614 121 aaPredicted RBP8.7□□□□□ -1.02
SVIP-201ENST00000354193 HIST1H1EP10412 219 aaKnown RBP8.7□□□□□ -1.02
SVIP-201ENST00000354193 SRSF2Q01130 221 aaKnown RBP8.7□□□□□ -1.02
SVIP-201ENST00000354193 TRBV12-3P01733 135 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 PAX2Q02962 417 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 PVRIGQ6DKI7 326 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 RNF182Q8N6D2 247 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 NPFFR1Q9GZQ6 430 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 EPDR1Q9UM22 224 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 TRBV20OR9-2A0A075B6H5 130 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 B4DEV8 164 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 P01737 135 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 ORM1P02763 201 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 CBLN1P23435 193 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 SRD5A3Q9H8P0 318 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 IGLV11-55A0A075B6I3 123 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 SERTM2A0A1B0GWG4 89 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 A0A1W2PRE2 83 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 GZMBP10144 247 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 CD33P20138 364 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 MRGPRG-AS1Q2M3A8 158 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 SIGLECL1Q8N7X8 197 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 FAM110DQ8TAY7 271 aaPredicted RBP8.69□□□□□ -1.02
SVIP-201ENST00000354193 PRSS22Q9GZN4 317 aa8.69□□□□□ -1.02
SVIP-201ENST00000354193 DEFB136Q30KP8 78 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 BAGE3Q86Y29 109 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 ZNF503Q96F45 646 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 FAM181BA6NEQ2 426 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 SNURFLB1AK76 121 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 PPP1R2P9O14990 202 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 ELOBQ15370 118 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 C5orf17Q8NAS9 161 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 SMR3AQ99954 134 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 ZNF738Q8NE65 137 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 FNDC10F2Z333 226 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 CTSGP08311 255 aa8.68□□□□□ -1.02
SVIP-201ENST00000354193 TGOLN2O43493 480 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 IGHV4-31P0DP07 118 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 THAP8Q8NA92 274 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 ANAPC16Q96DE5 110 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 FAM167A-AS1Q96KT0 104 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 TXNDC17Q9BRA2 123 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 GRIFINA4D1Z8 144 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 NPIPB5A8MRT5 1133 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms