RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 Q6ZSV7 163 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 C16orf82Q7Z2V1 217 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 Q8N9W7 124 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 OR5AU1Q8NGC0 362 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 OR51G1Q8NGK1 321 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 C2CD4CQ8TF44 421 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 BTF3L4Q96K17 158 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 PAXXQ9BUH6 204 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 TRBV20OR9-2A0A075B6H5 130 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 TGIF2-C20orf24A0A0A6YYL0 155 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 IGHV7-81A0A0B4J1V7 117 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 A0A1W2PRD5 423 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 A0A1W2PRF3 423 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 A0A1W2PRM7 423 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 GGTLC3B5MD39 225 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 TYMSP04818 313 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 PFN1P07737 140 aaKnown RBP6.39□□□□□ -1.39
CD44-205ENST00000352818 CXCL1P09341 107 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 HIST1H1BP16401 226 aaKnown RBP6.39□□□□□ -1.39
CD44-205ENST00000352818 S100PP25815 95 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 CX3CL1P78423 397 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 NDPQ00604 133 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 ASPHD1Q5U4P2 390 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 MORN5Q5VZ52 161 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 ZNF343Q6P1L6 599 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 FXYD5Q96DB9 178 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 FAM210BQ96KR6 192 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 TMEM68Q96MH6 324 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 OR5B12Q96R08 314 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 DERL1Q9BUN8 251 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 OR51M1Q9H341 326 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 TMEM14CQ9P0S9 112 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 KMT2AQ03164 3969 aa6.39□□□□□ -1.39
CD44-205ENST00000352818 TRAV9-1A0A075B6T8 112 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 IGHV1-69DA0A0B4J2H0 117 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 CENPVL3A0A0U1RRI6 287 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 GGCTO75223 188 aaKnown RBP6.38□□□□□ -1.39
CD44-205ENST00000352818 SCGB2A1O75556 95 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 TOMM40O96008 361 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 IGKV1-17P01599 117 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 IGHV1-69P01742 117 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 IGHV3-48P01763 117 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 OR10J4P0C629 311 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 EGR2P11161 476 aaPredicted RBP6.38□□□□□ -1.39
CD44-205ENST00000352818 GP9P14770 177 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 IGLL1P15814 213 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 MYCNOSP40205 109 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 GALR1P47211 349 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 CRIP2P52943 208 aaPredicted RBP6.38□□□□□ -1.39
CD44-205ENST00000352818 TAS2R60P59551 318 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 YPEL3P61236 119 aaPredicted RBP6.38□□□□□ -1.39
CD44-205ENST00000352818 KIAA0141Q14154 515 aaPredicted RBP6.38□□□□□ -1.39
CD44-205ENST00000352818 Q6YL49 198 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 C19orf35Q6ZS72 473 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 LINC00305Q7Z4B0 112 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 S100A7AQ86SG5 101 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 C11orf44Q8N8P7 122 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 RBM14Q96PK6 669 aaKnown RBP6.38□□□□□ -1.39
CD44-205ENST00000352818 FANCD2OSQ96PS1 177 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 TXN2Q99757 166 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 RASL11BQ9BPW5 248 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 C16orf95Q9H693 158 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 SRD5A3Q9H8P0 318 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 THYN1Q9P016 225 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 MRPL27Q9P0M9 148 aaKnown RBP6.38□□□□□ -1.39
CD44-205ENST00000352818 HIGD1AQ9Y241 93 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 URGCP-MRPS24S4R325 110 aa6.38□□□□□ -1.39
CD44-205ENST00000352818 TRAV5A0A0B4J249 113 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 C5orf52A6NGY3 159 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 NCBP2LA6PVI3 153 aaKnown RBP6.37□□□□□ -1.39
CD44-205ENST00000352818 H3BRN7 92 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 UBE2CO00762 179 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 NHLRC4P0CG21 123 aaPredicted RBP6.37□□□□□ -1.39
CD44-205ENST00000352818 APELAP0DMC3 54 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 CD24P25063 80 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 RPL35P42766 123 aaKnown RBP6.37□□□□□ -1.39
CD44-205ENST00000352818 RPS10P46783 165 aaKnown RBP6.37□□□□□ -1.39
CD44-205ENST00000352818 MFAP4P55083 255 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 TIGITQ495A1 244 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 TEX38Q6PEX7 206 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 KCNIP4Q6PIL6 250 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 ZNF329Q86UD4 541 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 OR1B1Q8NGR6 318 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 VN1R17PQ8TDU5 208 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 SMIM12Q96EX1 92 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 SFRP2Q96HF1 295 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 IGF2BP2-AS1Q96M15 143 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 ELOVL1Q9BW60 279 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 MEGF9Q9H1U4 602 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 RNF24Q9Y225 148 aa6.37□□□□□ -1.39
CD44-205ENST00000352818 F8W735 103 aaPredicted RBP6.36□□□□□ -1.39
CD44-205ENST00000352818 AP4M1O00189 453 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 PHOX2AO14813 284 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 S100A9P06702 114 aaKnown RBP6.36□□□□□ -1.39
CD44-205ENST00000352818 RD3LP0DJH9 198 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 PYYP10082 97 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 PSG1P11464 419 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 ORM2P19652 201 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 CRYBB3P26998 211 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms