RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 TRAV12-1A0A0B4J245 112 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 CD3EP07766 207 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 OSR1Q8TAX0 266 aaPredicted RBP5.15□□□□□ -1.59
VCAN-203ENST00000343200 UBE2E2Q96LR5 201 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 PRSS29PA6NIE9 313 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 AHRRA9YTQ3 701 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 HAMPP81172 84 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 JPT1Q9UK76 154 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 C15orf61A6NNL5 157 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 ADARB2-AS1A8MUL3 147 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 VCYO14598 125 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 ZNF525Q8N782 197 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 ZNF721Q8TF20 911 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 SCARF2Q96GP6 870 aaPredicted RBP5.15□□□□□ -1.59
VCAN-203ENST00000343200 FGF22Q9HCT0 170 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 KIR2DL5BA0A0G2JN68 375 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 KIR2DL5BA0A0G2JPC4 375 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 VDAC2P45880 294 aaPredicted RBP5.15□□□□□ -1.59
VCAN-203ENST00000343200 KIR2DL5AQ8N109 375 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 TMEM141Q96I45 108 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 TM2D1Q9BX74 207 aa5.15□□□□□ -1.59
VCAN-203ENST00000343200 PRSS57Q6UWY2 283 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 TRGV2A0A075B6R0 118 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 CT55Q8WUE5 264 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 IFI27L2Q9H2X8 130 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 A0A0U1RQV1 116 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 H0Y8X5 98 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 IGHV2-5P01817 119 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 CEACAM5P06731 702 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 MIR17HGQ75NE6 70 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 CRLF1O75462 422 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 SLURP2P0DP57 97 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 CBLN3Q6UW01 205 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 UNQ9370/PRO34162Q6UXP9 181 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 GPHA2Q96T91 129 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 SRSF8Q9BRL6 282 aaKnown RBP5.14□□□□□ -1.59
VCAN-203ENST00000343200 A0A1W2PPE3 182 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 MYOD1P15172 320 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 VN1R2Q8NFZ6 395 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 TEX48A0A1B0GUV7 120 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 PVRIGQ6DKI7 326 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 FOXI2Q6ZQN5 318 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 LY6G6FQ5SQ64 297 aa5.14□□□□□ -1.59
VCAN-203ENST00000343200 NDUFC2-KCTD14E9PQ53 114 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 C10orf91Q5T1B1 145 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 Q6ZWC4 215 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 TMEM167AQ8TBQ9 72 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 PRIMA1Q86XR5 153 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 TMEM158Q8WZ71 300 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 FAM104BQ5XKR9 115 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 PPP1R32Q7Z5V6 425 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 C12orf76Q8N812 135 aaPredicted RBP5.13□□□□□ -1.59
VCAN-203ENST00000343200 ZPLD1Q8TCW7 415 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 TRBV6-7A0A0A0MS04 114 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 UQCRQO14949 82 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 GFERP55789 205 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 TIAF1O95411 115 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 PYYP10082 97 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 C17orf99Q6UX52 265 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 TMEM219Q86XT9 240 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 GLMPQ8WWB7 406 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 LHFPL6Q9Y693 200 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 LIFP15018 202 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 LYRM9A8MSI8 78 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 IGHV3-48P01763 117 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 SSC4DQ8WTU2 575 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 IGFBPL1Q8WX77 278 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 RNF125Q96EQ8 232 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 VSIRQ9H7M9 311 aa5.13□□□□□ -1.59
VCAN-203ENST00000343200 NGFRP08138 427 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 C19orf48Q6RUI8 117 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 HCSTQ9UBK5 93 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 SF3B6Q9Y3B4 125 aaKnown RBP5.12□□□□□ -1.59
VCAN-203ENST00000343200 FUSP35637 526 aaKnown RBP eCLIP5.12□□□□□ -1.59
VCAN-203ENST00000343200 LY6G5BQ8NDX9 201 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 C8orf46Q8TAG6 207 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 DPH3P1Q9H4G8 78 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 PKIGQ9Y2B9 76 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 SIT1Q9Y3P8 196 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 A0A0U1RRA0 63 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 GZMMP51124 257 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 PEAR1Q5VY43 1037 aaPredicted RBP5.12□□□□□ -1.59
VCAN-203ENST00000343200 DLL3Q9NYJ7 618 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 IDI2-AS1Q9NZ38 188 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 SLC25A28Q96A46 364 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 LINC01587Q99440 93 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 C21orf62Q9NYP8 219 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 SEC61GP60059 68 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 COL18A1P39060 1754 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 TMEM14DPA8MWL7 114 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 NPYP01303 97 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 UBE2BP63146 152 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 WFDC5Q8TCV5 224 aa5.12□□□□□ -1.59
VCAN-203ENST00000343200 NDUFC1O43677 76 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 PATE4P0C8F1 98 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 C1orf195Q5TG92 126 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 C8orf31Q8N9H6 132 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 KLHDC9Q8NEP7 349 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 C18orf32Q8TCD1 76 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 ELSPBP1Q96BH3 223 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms