RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 NEDD8Q15843 81 aa11.54□□□□□ -0.56
TRA2B-202ENST00000342294 RNASE12Q5GAN4 147 aaKnown RBP11.54□□□□□ -0.56
TRA2B-202ENST00000342294 TMEM268Q5VZI3 342 aa11.54□□□□□ -0.56
TRA2B-202ENST00000342294 OR1B1Q8NGR6 318 aa11.54□□□□□ -0.56
TRA2B-202ENST00000342294 RTBDNQ9BSG5 229 aaPredicted RBP11.54□□□□□ -0.56
TRA2B-202ENST00000342294 NAA60Q9H7X0 242 aa11.54□□□□□ -0.56
TRA2B-202ENST00000342294 SLC25A22Q9H936 323 aa11.54□□□□□ -0.56
TRA2B-202ENST00000342294 COMMD3Q9UBI1 195 aa11.54□□□□□ -0.56
TRA2B-202ENST00000342294 HSPB7Q9UBY9 170 aa11.54□□□□□ -0.56
TRA2B-202ENST00000342294 TNFRSF18Q9Y5U5 241 aa11.54□□□□□ -0.56
TRA2B-202ENST00000342294 TMEM56-RWDD3S4R434 201 aa11.54□□□□□ -0.56
TRA2B-202ENST00000342294 A0A087WTM6 91 aa11.53□□□□□ -0.56
TRA2B-202ENST00000342294 GABARAPH6UMI1 98 aa11.53□□□□□ -0.56
TRA2B-202ENST00000342294 GABARAPO95166 117 aa11.53□□□□□ -0.56
TRA2B-202ENST00000342294 DNAH10OSP0CZ25 163 aa11.53□□□□□ -0.56
TRA2B-202ENST00000342294 SULT1A3P0DMM9 295 aa11.53□□□□□ -0.56
TRA2B-202ENST00000342294 SULT1A4P0DMN0 295 aa11.53□□□□□ -0.56
TRA2B-202ENST00000342294 ZNF182P17025 639 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-202ENST00000342294 THAP8Q8NA92 274 aa11.53□□□□□ -0.56
TRA2B-202ENST00000342294 DTD1Q8TEA8 209 aa11.53□□□□□ -0.56
TRA2B-202ENST00000342294 MTFP1Q9UDX5 166 aa11.53□□□□□ -0.56
TRA2B-202ENST00000342294 A0A096LPF7 62 aa11.52□□□□□ -0.57
TRA2B-202ENST00000342294 SIVA1O15304 175 aa11.52□□□□□ -0.57
TRA2B-202ENST00000342294 ADAP1O75689 374 aa11.52□□□□□ -0.57
TRA2B-202ENST00000342294 OR52I2Q8NH67 350 aa11.52□□□□□ -0.57
TRA2B-202ENST00000342294 GPR82Q96P67 336 aa11.52□□□□□ -0.57
TRA2B-202ENST00000342294 RBKSQ9H477 322 aa11.52□□□□□ -0.57
TRA2B-202ENST00000342294 UBR4Q5T4S7 5183 aa11.51□□□□□ -0.57
TRA2B-202ENST00000342294 CFDP00746 253 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-202ENST00000342294 SCGB2B2Q4G0G5 96 aa11.51□□□□□ -0.57
TRA2B-202ENST00000342294 ZNF738Q8NE65 137 aa11.51□□□□□ -0.57
TRA2B-202ENST00000342294 OR8A1Q8NGG7 326 aa11.51□□□□□ -0.57
TRA2B-202ENST00000342294 VSIG2Q96IQ7 327 aa11.51□□□□□ -0.57
TRA2B-202ENST00000342294 GAGE12BA1L429 117 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 CRYM-AS1A6NIL9 109 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 KRTAP29-1A8MX34 341 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-202ENST00000342294 H7BYZ3 331 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 GAGE7O76087 117 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 TNFAIP8O95379 198 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 GAGE12FP0CL80 117 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 GAGE12GP0CL81 117 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 GAGE12IP0CL82 117 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 GCSHP23434 173 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 LSM3P62310 102 aaKnown RBP11.5□□□□□ -0.57
TRA2B-202ENST00000342294 RHOBP62745 196 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 HAMPP81172 84 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 HIST1H1AQ02539 215 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-202ENST00000342294 GGNBP1Q5YKI7 109 aa11.5□□□□□ -0.57
TRA2B-202ENST00000342294 HPGDSO60760 199 aa11.49□□□□□ -0.57
TRA2B-202ENST00000342294 CDKN1BP46527 198 aa11.49□□□□□ -0.57
TRA2B-202ENST00000342294 GPR107Q5VW38 600 aa11.49□□□□□ -0.57
TRA2B-202ENST00000342294 TMEM229BQ8NBD8 167 aa11.49□□□□□ -0.57
TRA2B-202ENST00000342294 IL22RA2Q969J5 263 aa11.49□□□□□ -0.57
TRA2B-202ENST00000342294 YIPF6Q96EC8 236 aa11.49□□□□□ -0.57
TRA2B-202ENST00000342294 C14orf166Q9Y224 244 aaKnown RBP11.49□□□□□ -0.57
TRA2B-202ENST00000342294 RAB3DO95716 219 aa11.48□□□□□ -0.57
TRA2B-202ENST00000342294 RLN2P04090 185 aa11.48□□□□□ -0.57
TRA2B-202ENST00000342294 CXCL3P19876 107 aa11.48□□□□□ -0.57
TRA2B-202ENST00000342294 CCR6P51684 374 aa11.48□□□□□ -0.57
TRA2B-202ENST00000342294 KIR3DS1Q14943 382 aa11.48□□□□□ -0.57
TRA2B-202ENST00000342294 SURF2Q15527 256 aaPredicted RBP11.48□□□□□ -0.57
TRA2B-202ENST00000342294 TMEM182Q6ZP80 229 aaPredicted RBP11.48□□□□□ -0.57
TRA2B-202ENST00000342294 NFE4Q86UQ8 179 aa11.48□□□□□ -0.57
TRA2B-202ENST00000342294 C20orf144Q9BQM9 153 aa11.48□□□□□ -0.57
TRA2B-202ENST00000342294 TMPRSS5Q9H3S3 457 aa11.48□□□□□ -0.57
TRA2B-202ENST00000342294 PPP1R14DQ9NXH3 145 aa11.48□□□□□ -0.57
TRA2B-202ENST00000342294 NXPH4O95158 308 aa11.47□□□□□ -0.57
TRA2B-202ENST00000342294 ORM2P19652 201 aa11.47□□□□□ -0.57
TRA2B-202ENST00000342294 FGL1Q08830 312 aa11.47□□□□□ -0.57
TRA2B-202ENST00000342294 SMCO1Q147U7 214 aa11.47□□□□□ -0.57
TRA2B-202ENST00000342294 PSG3Q16557 428 aa11.47□□□□□ -0.57
TRA2B-202ENST00000342294 STEAP1BQ6NZ63 245 aa11.47□□□□□ -0.57
TRA2B-202ENST00000342294 PRR13Q9NZ81 148 aa11.47□□□□□ -0.57
TRA2B-202ENST00000342294 GPR132Q9UNW8 380 aa11.47□□□□□ -0.57
TRA2B-202ENST00000342294 GATA2P23769 480 aaPredicted RBP11.46□□□□□ -0.57
TRA2B-202ENST00000342294 TAS2R19P59542 299 aa11.46□□□□□ -0.57
TRA2B-202ENST00000342294 TMED4Q7Z7H5 227 aa11.46□□□□□ -0.57
TRA2B-202ENST00000342294 TMEM70Q9BUB7 260 aa11.46□□□□□ -0.57
TRA2B-202ENST00000342294 TMEM147Q9BVK8 224 aa11.46□□□□□ -0.57
TRA2B-202ENST00000342294 PRSS46E5RG02 174 aa11.45□□□□□ -0.58
TRA2B-202ENST00000342294 H3BRN7 92 aa11.45□□□□□ -0.58
TRA2B-202ENST00000342294 PRB4P10163 310 aaPredicted RBP11.45□□□□□ -0.58
TRA2B-202ENST00000342294 SERTAD4-AS1Q5TG53 156 aa11.45□□□□□ -0.58
TRA2B-202ENST00000342294 LYZL2Q7Z4W2 148 aa11.45□□□□□ -0.58
TRA2B-202ENST00000342294 CCDC28AQ8IWP9 274 aa11.45□□□□□ -0.58
TRA2B-202ENST00000342294 BPIFCQ8NFQ6 507 aa11.45□□□□□ -0.58
TRA2B-202ENST00000342294 A0A0B4J2A0 478 aa11.44□□□□□ -0.58
TRA2B-202ENST00000342294 S100A7P31151 101 aa11.44□□□□□ -0.58
TRA2B-202ENST00000342294 RAB11AP62491 216 aa11.44□□□□□ -0.58
TRA2B-202ENST00000342294 DAZ2Q13117 558 aaKnown RBP11.44□□□□□ -0.58
TRA2B-202ENST00000342294 FAAP20Q6NZ36 180 aa11.44□□□□□ -0.58
TRA2B-202ENST00000342294 Q6ZTI0 123 aa11.44□□□□□ -0.58
TRA2B-202ENST00000342294 OR1S1Q8NH92 325 aa11.44□□□□□ -0.58
TRA2B-202ENST00000342294 SHANK2-AS3Q9BTD1 123 aa11.44□□□□□ -0.58
TRA2B-202ENST00000342294 SHPKQ9UHJ6 478 aa11.44□□□□□ -0.58
TRA2B-202ENST00000342294 A0A087X0K7 114 aa11.43□□□□□ -0.58
TRA2B-202ENST00000342294 SNURFLB1AK76 121 aa11.43□□□□□ -0.58
TRA2B-202ENST00000342294 FAM25AB3EWG3 89 aa11.43□□□□□ -0.58
TRA2B-202ENST00000342294 FAM25CB3EWG5 89 aa11.43□□□□□ -0.58
TRA2B-202ENST00000342294 FAM25GB3EWG6 89 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms