RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TIMM23O14925 209 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 PFN1P07737 140 aaKnown RBP8.03□□□□□ -1.12
COL4A6-201ENST00000334504 HAMPP81172 84 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
COL4A6-201ENST00000334504 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 CFHR2P36980 270 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 TMEM258P61165 79 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 PPP1R32Q7Z5V6 425 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 Q86TA4 180 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 LY6G5BQ8NDX9 201 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 C7orf69Q9H7B7 122 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 C17orf100A8MU93 164 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 IGHV3-53P01767 116 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 TMEM190Q8WZ59 177 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 MESP1Q9BRJ9 268 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 UBL5Q9BZL1 73 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 CHD5Q8TDI0 1954 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 TMEM213A2RRL7 107 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 C15orf53Q8NAA6 179 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 SPANXCQ9NY87 97 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 IGHV1-24A0A0C4DH33 117 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 SRRM4A7MD48 611 aaKnown RBP8.02□□□□□ -1.13
COL4A6-201ENST00000334504 ANXA2RQ3ZCQ2 193 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 ARFGEF1Q9Y6D6 1849 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 COL18A1P39060 1754 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 MCM3APO60318 1980 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 POLR2AP24928 1970 aaKnown RBP8.02□□□□□ -1.13
COL4A6-201ENST00000334504 TRAV12-1A0A0B4J245 112 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 WNT2P09544 360 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 TUBGCP6Q96RT7 1819 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 IGKV1-27A0A075B6S5 117 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 VDAC2P45880 294 aaPredicted RBP8.02□□□□□ -1.13
COL4A6-201ENST00000334504 RPL36AP83881 106 aaKnown RBP8.02□□□□□ -1.13
COL4A6-201ENST00000334504 FOXF2Q12947 444 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 ANKRD29Q8N6D5 301 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 RPL36ALQ969Q0 106 aaKnown RBP8.02□□□□□ -1.13
COL4A6-201ENST00000334504 METRNQ9UJH8 293 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 CEACAM8P31997 349 aaPredicted RBP8.02□□□□□ -1.13
COL4A6-201ENST00000334504 TCTEX1D4Q5JR98 221 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 DTX2Q86UW9 622 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 NEU4Q8WWR8 484 aaPredicted RBP8.02□□□□□ -1.13
COL4A6-201ENST00000334504 COL11A1P12107 1806 aaPredicted RBP8.02□□□□□ -1.13
COL4A6-201ENST00000334504 FAM166AQ6J272 317 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 SAP25Q8TEE9 199 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 CARD19Q96LW7 228 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 ANKRD36A6QL64 1941 aa8.02□□□□□ -1.13
COL4A6-201ENST00000334504 EPOPA6NHQ4 379 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 RS1O15537 224 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 OR11H6Q8NGC7 330 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 LINC00527Q9UJ94 153 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 TP53TG1Q9Y2A0 90 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 A0A1W2PR77 199 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 NDPQ00604 133 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 Q6ZVH6 145 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 C15orf62A8K5M9 175 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 C10orf91Q5T1B1 145 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 LIME1Q9H400 295 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 TRIP12Q14669 1992 aaPredicted RBP8.01□□□□□ -1.13
COL4A6-201ENST00000334504 TRGV1A0A0A0MS02 117 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 FDCSPQ8NFU4 85 aa8.01□□□□□ -1.13
COL4A6-201ENST00000334504 PDCD11Q14690 1871 aaKnown RBP8□□□□□ -1.13
COL4A6-201ENST00000334504 A0A087WX48 190 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 AMTNQ6UX39 209 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 A0A0G2JRQ6 117 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 CRYBA4P53673 196 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 ASXL3Q9C0F0 2248 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 MMP23AO75900 390 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 SCN2AQ99250 2005 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 STRCP1A6NGW2 1772 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 CCL25O15444 150 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 ICE1Q9Y2F5 2266 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 C15orf32Q32M92 178 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 C8orf49Q96NF6 230 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 C5orf47Q569G3 176 aa8□□□□□ -1.13
COL4A6-201ENST00000334504 IL18BPO95998 194 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 CDPF1Q6NVV7 123 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 RNF144BQ7Z419 303 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 Q8N8P6 123 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 CYYR1Q96J86 154 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 LINC00477Q96M19 166 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 CACNA1GO43497 2377 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 HEATR5BQ9P2D3 2071 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 UBR3Q6ZT12 1888 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 ZCCHC24Q8N2G6 241 aaKnown RBP7.99□□□□□ -1.13
COL4A6-201ENST00000334504 PRO1854Q9UHT4 67 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 MARF1Q9Y4F3 1742 aaKnown RBP7.99□□□□□ -1.13
COL4A6-201ENST00000334504 LINC00473A8K010 186 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 CRYGSP22914 178 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 C9orf106Q8NAJ2 232 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 LYPD1Q8N2G4 141 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 TMEM141Q96I45 108 aa7.99□□□□□ -1.13
COL4A6-201ENST00000334504 SIPA1L3O60292 1781 aaPredicted RBP7.98□□□□□ -1.13
COL4A6-201ENST00000334504 TRAV41A0A0B4J266 112 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 TINCRA0A1B0GVN0 87 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 SYNJ2BPP57105 145 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 MLANAQ16655 118 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 LGALS9BQ3B8N2 356 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 LGALS9CQ6DKI2 356 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 SP7Q8TDD2 431 aaPredicted RBP7.98□□□□□ -1.13
COL4A6-201ENST00000334504 NTN5Q8WTR8 489 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms