RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 ZNF562Q6V9R5 426 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 AGMATQ9BSE5 352 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 COL4A1P02462 1669 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 FAM201AQ5SY85 155 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 MYMXA0A1B0GTQ4 84 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 PSCAO43653 123 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 IGKV1D-13A0A0B4J2D9 117 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 IGKV1-13P0DP09 117 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 RNF126Q9BV68 326 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 LAMTOR3Q9UHA4 124 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 WDR83OSQ9Y284 106 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 IGHV1-18A0A0C4DH31 117 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 ZFP36L1Q07352 338 aaKnown RBP13.73□□□□□ -0.21
PDZD8-201ENST00000334464 IGHV3OR16-8A0A075B7F1 116 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 TRBV6-6A0A0A6YYG2 114 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 SRRM4A7MD48 611 aaKnown RBP13.72□□□□□ -0.21
PDZD8-201ENST00000334464 MEGF9Q9H1U4 602 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 GATA2P23769 480 aaPredicted RBP13.72□□□□□ -0.21
PDZD8-201ENST00000334464 C5orf64Q2M2E5 130 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 FAM90A2PQ658T7 463 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 IGHV1-46P01743 117 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 GAGE2BQ13066 116 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 GAGE2EQ4V326 116 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 KLF17Q5JT82 389 aaPredicted RBP13.72□□□□□ -0.21
PDZD8-201ENST00000334464 GAGE2DQ9UEU5 116 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 ITGB1BP1O14713 200 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 C1QTNF9P0C862 333 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 PLSCR4Q9NRQ2 329 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 CDKN1AP38936 164 aa13.72□□□□□ -0.21
PDZD8-201ENST00000334464 IGKV1D-43A0A0B4J1Z2 117 aa13.71□□□□□ -0.21
PDZD8-201ENST00000334464 IGKV3D-20A0A0C4DH25 116 aa13.71□□□□□ -0.21
PDZD8-201ENST00000334464 GFRA4Q9GZZ7 299 aa13.71□□□□□ -0.21
PDZD8-201ENST00000334464 ADAMTS9Q9P2N4 1935 aa13.71□□□□□ -0.21
PDZD8-201ENST00000334464 SS18Q15532 418 aa13.71□□□□□ -0.21
PDZD8-201ENST00000334464 RFNGQ9Y644 331 aa13.71□□□□□ -0.21
PDZD8-201ENST00000334464 TREML4Q6UXN2 200 aa13.71□□□□□ -0.21
PDZD8-201ENST00000334464 PRRC2AP48634 2157 aaKnown RBP13.71□□□□□ -0.21
PDZD8-201ENST00000334464 LAIR2Q6ISS4 152 aa13.71□□□□□ -0.21
PDZD8-201ENST00000334464 AMBPP02760 352 aa13.71□□□□□ -0.22
PDZD8-201ENST00000334464 PYYP10082 97 aa13.71□□□□□ -0.22
PDZD8-201ENST00000334464 NEGR1Q7Z3B1 354 aa13.71□□□□□ -0.22
PDZD8-201ENST00000334464 J3QRE1 110 aa13.71□□□□□ -0.22
PDZD8-201ENST00000334464 EVI2AP22794 236 aa13.7□□□□□ -0.22
PDZD8-201ENST00000334464 SPRR3Q9UBC9 169 aa13.7□□□□□ -0.22
PDZD8-201ENST00000334464 TMEM178BH3BS89 294 aa13.7□□□□□ -0.22
PDZD8-201ENST00000334464 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
PDZD8-201ENST00000334464 TMEM8BA6NDV4 472 aa13.7□□□□□ -0.22
PDZD8-201ENST00000334464 TRGV1A0A0A0MS02 117 aa13.7□□□□□ -0.22
PDZD8-201ENST00000334464 OCC1Q8TAD7 63 aa13.7□□□□□ -0.22
PDZD8-201ENST00000334464 FGF16O43320 207 aa13.7□□□□□ -0.22
PDZD8-201ENST00000334464 VWC2LB2RUY7 222 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 TGFBR3LH3BV60 316 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 GGTLC1Q9BX51 225 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 SLC25A16P16260 332 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 MRPL27Q9P0M9 148 aaKnown RBP13.69□□□□□ -0.22
PDZD8-201ENST00000334464 IGHV1-3A0A0C4DH29 117 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 H3BMM0 161 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 SUPT4H1P63272 117 aaKnown RBP13.69□□□□□ -0.22
PDZD8-201ENST00000334464 LTBP1Q14766 1721 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 CRYGSP22914 178 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 RHODO00212 210 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 NSUN5P1Q3KNT7 163 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 TPTE2P1Q5T6R2 138 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 CD33P20138 364 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 DAZ1Q9NQZ3 744 aaKnown RBP13.69□□□□□ -0.22
PDZD8-201ENST00000334464 PKIGQ9Y2B9 76 aa13.69□□□□□ -0.22
PDZD8-201ENST00000334464 PMS2P5A8MQ11 134 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 NPIPB5A8MRT5 1133 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 GZMBP10144 247 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 ZNF837Q96EG3 531 aaPredicted RBP13.68□□□□□ -0.22
PDZD8-201ENST00000334464 INAFM2P0DMQ5 153 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 LURAP1LQ8IV03 231 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 ABCA2Q9BZC7 2435 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 ARHGAP32A7KAX9 2087 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 IGKV1-9A0A0C4DH69 117 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 Q6ZS49 121 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 GATD1Q8NB37 220 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 D6R8Y8 96 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 PSG1P11464 419 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 PSG3Q16557 428 aa13.68□□□□□ -0.22
PDZD8-201ENST00000334464 ZNF672Q499Z4 452 aaPredicted RBP13.68□□□□□ -0.22
PDZD8-201ENST00000334464 TIMM21Q9BVV7 248 aa13.67□□□□□ -0.22
PDZD8-201ENST00000334464 CD55P08174 381 aa13.67□□□□□ -0.22
PDZD8-201ENST00000334464 SRSF2Q01130 221 aaKnown RBP13.67□□□□□ -0.22
PDZD8-201ENST00000334464 LY6G6FQ5SQ64 297 aa13.67□□□□□ -0.22
PDZD8-201ENST00000334464 LINC01356Q8N9X3 169 aa13.67□□□□□ -0.22
PDZD8-201ENST00000334464 HIST1H2BLQ99880 126 aa13.67□□□□□ -0.22
PDZD8-201ENST00000334464 DSCAML1Q8TD84 2053 aa13.67□□□□□ -0.22
PDZD8-201ENST00000334464 NTN3O00634 580 aaPredicted RBP13.67□□□□□ -0.22
PDZD8-201ENST00000334464 IL17RELQ6ZVW7 336 aa13.67□□□□□ -0.22
PDZD8-201ENST00000334464 LYZL4Q96KX0 146 aa13.67□□□□□ -0.22
PDZD8-201ENST00000334464 CEACAM8P31997 349 aaPredicted RBP13.66□□□□□ -0.22
PDZD8-201ENST00000334464 LDLRAD4O15165 306 aa13.66□□□□□ -0.22
PDZD8-201ENST00000334464 NDUFB8O95169 186 aa13.66□□□□□ -0.22
PDZD8-201ENST00000334464 BTCP35070 178 aa13.66□□□□□ -0.22
PDZD8-201ENST00000334464 C6orf226Q5I0X4 101 aa13.66□□□□□ -0.22
PDZD8-201ENST00000334464 TMEM200BQ69YZ2 307 aa13.66□□□□□ -0.22
PDZD8-201ENST00000334464 SHISA3A0PJX4 238 aa13.66□□□□□ -0.22
PDZD8-201ENST00000334464 ACTL10Q5JWF8 245 aa13.66□□□□□ -0.22
PDZD8-201ENST00000334464 TCRAP04437 139 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms