RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TNFRSF14Q92956 283 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 MRPL32Q9BYC8 188 aaKnown RBP9.56□□□□□ -0.88
HDAC6-201ENST00000334136 MRPL20Q9BYC9 149 aaKnown RBP9.56□□□□□ -0.88
HDAC6-201ENST00000334136 ABCA2Q9BZC7 2435 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 LHBP01229 141 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 GATA3P23771 443 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 ECSCRQ19T08 205 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 AMMECR1LQ6DCA0 310 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 BRD3OSQ6XYD6 125 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 C10orf105Q8TEF2 133 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 SLC25A33Q9BSK2 321 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 TRBV6-6A0A0A6YYG2 114 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 LOC107984156A0A0G2JMH3 177 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 H3BVH4 76 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 MLANAQ16655 118 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 HAPLN4Q86UW8 402 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 ARL17AQ8IVW1 177 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 OR52E5Q8NH55 327 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 RIPPLY3P57055 190 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 SRSF7Q16629 238 aaKnown RBP eCLIP9.55□□□□□ -0.881e-6■■■□□ 17.2
HDAC6-201ENST00000334136 Q6ZWC4 215 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 MYOZ3Q8TDC0 251 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 IGHV3OR16-8A0A075B7F1 116 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 hDV102S1A0JD36 115 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 C15orf61A6NNL5 157 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 LINC00614P0C842 121 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 C2orf83Q53S99 150 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 C10orf55Q5SWW7 151 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 DNLZQ5SXM8 178 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 GPR82Q96P67 336 aa9.55□□□□□ -0.88
HDAC6-201ENST00000334136 SAA1P0DJI8 122 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-201ENST00000334136 PET117Q6UWS5 81 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 RPP21Q9H633 154 aaKnown RBP9.54□□□□□ -0.88
HDAC6-201ENST00000334136 FBXL7Q9UJT9 491 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 TRAV8-6A0A0B4J262 113 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 A0A1B0GUT8 65 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 OR2T8A6NH00 312 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 CD24P25063 80 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 ZNF138P52744 262 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 ASPHD1Q5U4P2 390 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 SPANXN1Q5VSR9 72 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 Q8NFD4 153 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 ZNF502Q8TBZ5 544 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 CTSZQ9UBR2 303 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 IGHV3OR16-13A0A075B7E8 117 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 IGHV3-74A0A0B4J1X5 117 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 IGHV2-70DA0A0C4DH43 119 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 ARL6IP6Q8N6S5 226 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 KIR3DL3Q8N743 410 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 ZNF414Q96IQ9 312 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 MEGF9Q9H1U4 602 aa9.54□□□□□ -0.88
HDAC6-201ENST00000334136 OR10J3Q5JRS4 329 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 MBNL3Q9NUK0 354 aaKnown RBP9.53□□□□□ -0.88
HDAC6-201ENST00000334136 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-201ENST00000334136 GPR183P32249 361 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 NUDT10Q8NFP7 164 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 OSR1Q8TAX0 266 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-201ENST00000334136 NUDT11Q96G61 164 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 HECTD1Q9ULT8 2610 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 A0A1W2PRE2 83 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 IL4P05112 153 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 TSPOP30536 169 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 PSMB2P49721 201 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 TIMM23O14925 209 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 NPFFO15130 113 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 CR1LQ2VPA4 569 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 SAPCD1Q5SSQ6 148 aa9.53□□□□□ -0.88
HDAC6-201ENST00000334136 MGPP08493 103 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 RBPMS2Q6ZRY4 209 aaKnown RBP9.52□□□□□ -0.89
HDAC6-201ENST00000334136 Q6ZS49 121 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 Q6ZVH6 145 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 HIST1H4GQ99525 98 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 FBXL15Q9H469 300 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 NCOR1P1Q9H4R4 102 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 C22orf46C9J442 243 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 CX3CL1P78423 397 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 MINOS1Q5TGZ0 78 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 MINOS1-NBL1R4GNA1 71 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 A0A087X0K7 114 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 TDRG1Q3Y452 100 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 C20orf144Q9BQM9 153 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 SPCS1Q9Y6A9 102 aa9.52□□□□□ -0.89
HDAC6-201ENST00000334136 FAM181BA6NEQ2 426 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 FOXI3A8MTJ6 420 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-201ENST00000334136 CD69Q07108 199 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 OR4A5Q8NH83 315 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 DPF1Q92782 380 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 PRELID3AQ96N28 172 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 TMEM160Q9NX00 188 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 F2Z2F3 143 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 UPK2O00526 184 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 DLX1P56177 255 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 UBE2V1Q13404 147 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 TMEM249Q2WGJ8 235 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 SMIM12Q96EX1 92 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 Q9H3A6 140 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 PLXNB1O43157 2135 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 A0A1W2PS18 150 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 SH2D7A6NKC9 451 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms