RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 ZNF71Q9NQZ8 489 aaPredicted RBP12.93□□□□□ -0.34
SLIT3-201ENST00000332966 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 NBR2O15453 112 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 TSPAN13O95857 204 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 B9A039 149 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 IGKV1-16P04430 117 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
SLIT3-201ENST00000332966 IGHV1-46P01743 117 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 PPIFP30405 207 aaKnown RBP12.92□□□□□ -0.34
SLIT3-201ENST00000332966 GAGE2BQ13066 116 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 LGALS9BQ3B8N2 356 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 HAX1O00165 279 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
SLIT3-201ENST00000332966 SH2D1AO60880 128 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 ZNF56Q15929 161 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 CHD3Q12873 2000 aaKnown RBP12.91□□□□□ -0.34
SLIT3-201ENST00000332966 FER1L5A0AVI2 2057 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 RNFT1Q5M7Z0 435 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 WDR86Q86TI4 376 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 ZCCHC24Q8N2G6 241 aaKnown RBP12.91□□□□□ -0.34
SLIT3-201ENST00000332966 LINC01549A6NIU2 74 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 NOTCH4Q99466 2003 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 A0A1W2PPM0 123 aa12.91□□□□□ -0.34
SLIT3-201ENST00000332966 SPAARA0A1B0GVQ0 90 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 C9orf172C9J069 976 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.34
SLIT3-201ENST00000332966 IGHV3-66A0A0C4DH42 116 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 F8W1H4 67 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.34
SLIT3-201ENST00000332966 SPINK8P0C7L1 97 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 JMJD8Q96S16 334 aa12.9□□□□□ -0.34
SLIT3-201ENST00000332966 TSSC4Q9Y5U2 329 aaPredicted RBP12.9□□□□□ -0.34
SLIT3-201ENST00000332966 GEMIN7Q9H840 131 aaKnown RBP12.89□□□□□ -0.35
SLIT3-201ENST00000332966 LSM4Q9Y4Z0 139 aaKnown RBP12.89□□□□□ -0.35
SLIT3-201ENST00000332966 SIVA1O15304 175 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 CD24P25063 80 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 RNF138Q8WVD3 245 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 ZDBF2Q9HCK1 2354 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 IGHV3-49A0A0A0MS15 119 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 APOBEC3AP31941 199 aaPredicted RBP12.89□□□□□ -0.35
SLIT3-201ENST00000332966 FAM104BQ5XKR9 115 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 PLSCR4Q9NRQ2 329 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 NDUFA4L2Q9NRX3 87 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 H7C1H1 209 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 ZNF562Q6V9R5 426 aa12.89□□□□□ -0.35
SLIT3-201ENST00000332966 PSMB11A5LHX3 300 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 CFHR2P36980 270 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 CSTL1Q9H114 145 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 TMEM238C9JI98 176 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 TMEM200BQ69YZ2 307 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 C15orf65H3BRN8 121 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 CD300EQ496F6 205 aaPredicted RBP12.88□□□□□ -0.35
SLIT3-201ENST00000332966 DOCK7Q96N67 2140 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
SLIT3-201ENST00000332966 PF4V1P10720 104 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 TMEM75Q8N9X5 138 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 FAM168AQ92567 244 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 SMKR1H3BMG3 65 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 SCGB1A1P11684 91 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 PAX1P15863 534 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 BSPH1Q075Z2 132 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 TRAV8-4A0A0B4J246 113 aa12.87□□□□□ -0.35
SLIT3-201ENST00000332966 ZNF503-AS2A6NEH8 195 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 KRTAP27-1Q3LI81 207 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 ETDBQ3ZM63 59 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 RNF5Q99942 180 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 ERG28Q9UKR5 140 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 PRB4P10163 310 aaPredicted RBP12.86□□□□□ -0.35
SLIT3-201ENST00000332966 RHOGP84095 191 aa12.86□□□□□ -0.35
SLIT3-201ENST00000332966 HEATR1Q9H583 2144 aaKnown RBP12.86□□□□□ -0.35
SLIT3-201ENST00000332966 GAGE12HA6NDE8 117 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 PDE6HQ13956 83 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 SHANK2-AS3Q9BTD1 123 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 TRAV21A0A0B4J279 112 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 A0A1W2PPI3 338 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 PRSS46E5RG02 174 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 ATP6V0BQ99437 205 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 IGHV1-8P0DP01 117 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 FAM106AQ4KMX7 169 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 FXYD5Q96DB9 178 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 ZNF747Q9BV97 191 aa12.85□□□□□ -0.35
SLIT3-201ENST00000332966 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 POU2AF1Q16633 256 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 FGF23Q9GZV9 251 aaPredicted RBP12.84□□□□□ -0.35
SLIT3-201ENST00000332966 TNFRSF6BO95407 300 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 SIGLEC9Q9Y336 463 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 ROS1P08922 2347 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 CEACAM4O75871 244 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 IGHV4-39P01824 125 aa12.84□□□□□ -0.35
SLIT3-201ENST00000332966 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms