RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 YTHDF2Q9Y5A9 579 aaKnown RBP12.38□□□□□ -0.43
EXOSC4-201ENST00000316052 LOC102723971A0A1B0GUV8 181 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 DUXBA0A1W2PPF3 345 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 ZNF98A6NK75 572 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 A8MTW9 85 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 HBE1P02100 147 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 PRM2P04554 102 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 MED14OSP0DP75 135 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 GATA2P23769 480 aaPredicted RBP12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 TMEM128Q5BJH2 165 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 AMTNQ6UX39 209 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 UBE2DNLQ8IWF7 75 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 LRTM2Q8N967 370 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 ENKURQ8TC29 256 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 MAGT1Q9H0U3 335 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 SLC25A22Q9H936 323 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 RPRMQ9NS64 109 aa12.37□□□□□ -0.43
EXOSC4-201ENST00000316052 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
EXOSC4-201ENST00000316052 SLC25A6P12236 298 aa12.36□□□□□ -0.43
EXOSC4-201ENST00000316052 FAUP35544 74 aaKnown RBP12.36□□□□□ -0.43
EXOSC4-201ENST00000316052 BCAP31P51572 246 aa12.36□□□□□ -0.43
EXOSC4-201ENST00000316052 GGNBP1Q5YKI7 109 aa12.36□□□□□ -0.43
EXOSC4-201ENST00000316052 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.36□□□□□ -0.43
EXOSC4-201ENST00000316052 CHAC2Q8WUX2 184 aa12.36□□□□□ -0.43
EXOSC4-201ENST00000316052 DOK5Q9P104 306 aa12.36□□□□□ -0.43
EXOSC4-201ENST00000316052 HSPG2P98160 4391 aa12.36□□□□□ -0.43
EXOSC4-201ENST00000316052 FAM240BA0A1B0GVZ2 78 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 WRBO00258 174 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 MED6O75586 246 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 CFDP00746 253 aaPredicted RBP12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 VAMP1P23763 118 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 GALR1P47211 349 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 MEOX2P50222 304 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 RRN3P1Q2M238 152 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 SAMD13Q5VXD3 122 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 IGFL4Q6B9Z1 124 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 TMEM88Q6PEY1 159 aa12.35□□□□□ -0.43
EXOSC4-201ENST00000316052 TRAV8-2A0A0B4J237 113 aa12.34□□□□□ -0.43
EXOSC4-201ENST00000316052 SYNGR2O43760 224 aa12.34□□□□□ -0.43
EXOSC4-201ENST00000316052 ORM2P19652 201 aa12.34□□□□□ -0.43
EXOSC4-201ENST00000316052 RNF212Q495C1 297 aa12.34□□□□□ -0.43
EXOSC4-201ENST00000316052 IGF2BP2-AS1Q96M15 143 aa12.34□□□□□ -0.43
EXOSC4-201ENST00000316052 CIB3Q96Q77 187 aaPredicted RBP12.34□□□□□ -0.43
EXOSC4-201ENST00000316052 MARVELD1Q9BSK0 173 aa12.34□□□□□ -0.43
EXOSC4-201ENST00000316052 SLC45A2Q9UMX9 530 aa12.34□□□□□ -0.43
EXOSC4-201ENST00000316052 LRP1BQ9NZR2 4599 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 PIGBOS1A0A0B4J2F0 54 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 LINC00854A0A1B0GVQ3 168 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 ZNF705GA8MUZ8 300 aaPredicted RBP12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 CRXO43186 299 aaPredicted RBP12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 SFT2D2O95562 160 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 HOXB5P09067 269 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 BTCP35070 178 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 CNN1P51911 297 aaKnown RBP12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 DAD1P61803 113 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 PPP1R1AQ13522 171 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 SPANXN5Q5MJ07 72 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 OR11H7Q8NGC8 314 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 OR4D5Q8NGN0 318 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 TMED3Q9Y3Q3 217 aa12.33□□□□□ -0.44
EXOSC4-201ENST00000316052 hCG_2014768A0A024R1R8 64 aa12.32□□□□□ -0.44
EXOSC4-201ENST00000316052 M0R2Z0 102 aa12.32□□□□□ -0.44
EXOSC4-201ENST00000316052 PFDN1O60925 122 aa12.32□□□□□ -0.44
EXOSC4-201ENST00000316052 RPP30P78346 268 aaKnown RBP12.32□□□□□ -0.44
EXOSC4-201ENST00000316052 SPINK13Q1W4C9 94 aa12.32□□□□□ -0.44
EXOSC4-201ENST00000316052 RNF182Q8N6D2 247 aa12.32□□□□□ -0.44
EXOSC4-201ENST00000316052 BPIFCQ8NFQ6 507 aa12.32□□□□□ -0.44
EXOSC4-201ENST00000316052 OR1B1Q8NGR6 318 aa12.32□□□□□ -0.44
EXOSC4-201ENST00000316052 TMEM208Q9BTX3 173 aa12.32□□□□□ -0.44
EXOSC4-201ENST00000316052 H3BP45 60 aa12.31□□□□□ -0.44
EXOSC4-201ENST00000316052 ACOT7LQ6ZUV0 252 aa12.31□□□□□ -0.44
EXOSC4-201ENST00000316052 SLC25A21Q9BQT8 299 aaPredicted RBP12.31□□□□□ -0.44
EXOSC4-201ENST00000316052 TMEM147Q9BVK8 224 aa12.31□□□□□ -0.44
EXOSC4-201ENST00000316052 AKR1C1Q04828 323 aa12.3□□□□□ -0.44
EXOSC4-201ENST00000316052 GPR82Q96P67 336 aa12.3□□□□□ -0.44
EXOSC4-201ENST00000316052 STRAPQ9Y3F4 350 aaKnown RBP12.3□□□□□ -0.44
EXOSC4-201ENST00000316052 H3BRN7 92 aa12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 DUSP14O95147 198 aaKnown RBP12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 TCRBP04435 133 aa12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 AZU1P20160 251 aa12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 FGL1Q08830 312 aa12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 FCN2Q15485 313 aa12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 C1orf134Q5TEV5 83 aa12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 TMEM144Q7Z5S9 345 aa12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 ZNF575Q86XF7 245 aa12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 BAP18Q8IXM2 172 aa12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 SLC25A39Q9BZJ4 359 aaPredicted RBP12.29□□□□□ -0.44
EXOSC4-201ENST00000316052 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
EXOSC4-201ENST00000316052 PLAC8L1A1L4L8 177 aa12.28□□□□□ -0.44
EXOSC4-201ENST00000316052 INSP01308 110 aa12.28□□□□□ -0.44
EXOSC4-201ENST00000316052 POLR2GP62487 172 aaKnown RBP eCLIP12.28□□□□□ -0.44
EXOSC4-201ENST00000316052 ID3Q02535 119 aa12.28□□□□□ -0.44
EXOSC4-201ENST00000316052 CYP2G1PQ6ZSU1 146 aa12.28□□□□□ -0.44
EXOSC4-201ENST00000316052 SHANK2-AS3Q9BTD1 123 aa12.28□□□□□ -0.44
EXOSC4-201ENST00000316052 PMS2P5A8MQ11 134 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 LYRM9A8MSI8 78 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 INMT-MINDY4F8WBC2 141 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 ADAP1O75689 374 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 IL5P05113 134 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 DEFB130BP0DP73 79 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms