RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 TOMM20LQ6UXN7 152 aa12.25□□□□□ -0.45
CGGBP1-201ENST00000309534 TRBV19A0A075B6N1 114 aa12.24□□□□□ -0.45
CGGBP1-201ENST00000309534 TMEM89A2RUT3 159 aa12.24□□□□□ -0.45
CGGBP1-201ENST00000309534 ARHGAP32A7KAX9 2087 aa12.24□□□□□ -0.45
CGGBP1-201ENST00000309534 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
CGGBP1-201ENST00000309534 BAGE3Q86Y29 109 aa12.24□□□□□ -0.45
CGGBP1-201ENST00000309534 NDUFA4O00483 81 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 OR2D3Q8NGH3 330 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 C1orf159Q96HA4 380 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 IGHV4-59P01825 116 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 IGF1P05019 195 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 RIGQ13278 110 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 MRGPRG-AS1Q2M3A8 158 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 OR10J6PQ8NGY7 276 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 TCL1AP56279 114 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 SNRPEP62304 92 aaKnown RBP12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 NHLRC2Q8NBF2 726 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 PEF1Q9UBV8 284 aaKnown RBP12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 CIARTQ8N365 385 aaPredicted RBP12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 TPPP3Q9BW30 176 aa12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 SOX21Q9Y651 276 aaPredicted RBP12.23□□□□□ -0.45
CGGBP1-201ENST00000309534 HLA-DQA1P01909 254 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 TRGC2P03986 189 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 GP9P14770 177 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 ELANEP08246 267 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 CTSGP08311 255 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 ZNF738Q8NE65 137 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 PSG8Q9UQ74 426 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 PGPEP1LA6NFU8 196 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 GCGP01275 180 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 SIGLEC15Q6ZMC9 328 aa12.22□□□□□ -0.45
CGGBP1-201ENST00000309534 ZNF207O43670 478 aaKnown RBP12.21□□□□□ -0.45
CGGBP1-201ENST00000309534 ASPHD1Q5U4P2 390 aa12.21□□□□□ -0.45
CGGBP1-201ENST00000309534 ARL6IP6Q8N6S5 226 aa12.21□□□□□ -0.45
CGGBP1-201ENST00000309534 RPP21Q9H633 154 aaKnown RBP12.21□□□□□ -0.45
CGGBP1-201ENST00000309534 ZNF253O75346 499 aa12.21□□□□□ -0.46
CGGBP1-201ENST00000309534 SMUG1Q53HV7 270 aa12.21□□□□□ -0.46
CGGBP1-201ENST00000309534 SNURFLB1AK76 121 aa12.21□□□□□ -0.46
CGGBP1-201ENST00000309534 IER3P46695 156 aa12.21□□□□□ -0.46
CGGBP1-201ENST00000309534 RPL15P61313 204 aaKnown RBP12.21□□□□□ -0.46
CGGBP1-201ENST00000309534 IGHV3OR16-8A0A075B7F1 116 aa12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 TMEM189A5PLL7 270 aa12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 C9orf139Q6ZV77 190 aa12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 EXOC3-AS1Q8N2X6 119 aa12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 TMEM86BQ8N661 226 aa12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 SAMD10Q9BYL1 202 aa12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 TMEM75Q8N9X5 138 aa12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 NOL4LQ96MY1 436 aaPredicted RBP12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 TMEM18Q96B42 140 aa12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 TET2Q6N021 2002 aaPredicted RBP12.2□□□□□ -0.46
CGGBP1-201ENST00000309534 SLC17A3O00476 420 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 Q6AWC8 147 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 SGK494Q96LW2 274 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 ZNF586Q9NXT0 402 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 MORN5Q5VZ52 161 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 MRPL54Q6P161 138 aaKnown RBP12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 IZUMO1RA6ND01 250 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 SPINK4O60575 86 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 S100A12P80511 92 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 IGHV3OR16-13A0A075B7E8 117 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 IGHV3-74A0A0B4J1X5 117 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 HOXA3O43365 443 aaPredicted RBP12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 PSG3Q16557 428 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 ZNF503Q96F45 646 aa12.19□□□□□ -0.46
CGGBP1-201ENST00000309534 SPEGQ15772 3267 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 IGHV3-49A0A0A0MS15 119 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 IGHV3-66A0A0C4DH42 116 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 CRIP2P52943 208 aaPredicted RBP12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 FAM231DQ6ZW35 169 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 RNASE7Q9H1E1 156 aaKnown RBP12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 ZNF492Q9P255 531 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 ZNF462Q96JM2 2506 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 ABCA1O95477 2261 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 TMEM183AQ8IXX5 376 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 DYNLRB2Q8TF09 96 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 DAZ1Q9NQZ3 744 aaKnown RBP12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 PEMTQ9UBM1 199 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 CRISP2P16562 243 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 BLCAPP62952 87 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 ZNF414Q96IQ9 312 aa12.18□□□□□ -0.46
CGGBP1-201ENST00000309534 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 CXCL1P09341 107 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 Q86TA4 180 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 TM4SF20Q53R12 229 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 MYO18BQ8IUG5 2567 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 ORM1P02763 201 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 Q6YL49 198 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 SIGLECL1Q8N7X8 197 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 FOXC2Q99958 501 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 OVOL1O14753 267 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 APCSP02743 223 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 EGR2P11161 476 aaPredicted RBP12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 SNRPD3P62318 126 aaKnown RBP12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 FOXE3Q13461 319 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 TSKUQ8WUA8 353 aa12.17□□□□□ -0.46
CGGBP1-201ENST00000309534 PLXNB1O43157 2135 aa12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 DMXL1Q9Y485 3027 aa12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 DMRT1Q9Y5R6 373 aa12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 A0A1B0GW15 77 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms