RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 VCYO14598 125 aa16.85■□□□□ 0.29
SH3RF3-201ENST00000309415 SEC11AP67812 179 aa16.85■□□□□ 0.29
SH3RF3-201ENST00000309415 RPRMLQ8N4K4 120 aa16.85■□□□□ 0.29
SH3RF3-201ENST00000309415 IGKV1-5P01602 117 aa16.85■□□□□ 0.29
SH3RF3-201ENST00000309415 F5H768 121 aa16.85■□□□□ 0.29
SH3RF3-201ENST00000309415 ATP6V0E1O15342 81 aa16.85■□□□□ 0.29
SH3RF3-201ENST00000309415 NBL1P41271 181 aa16.85■□□□□ 0.29
SH3RF3-201ENST00000309415 NHP2Q9NX24 153 aaKnown RBP16.84■□□□□ 0.29
SH3RF3-201ENST00000309415 SFTA2Q6UW10 78 aa16.84■□□□□ 0.29
SH3RF3-201ENST00000309415 INTS1Q8N201 2190 aaKnown RBP16.84■□□□□ 0.29
SH3RF3-201ENST00000309415 HOXA3O43365 443 aaPredicted RBP16.84■□□□□ 0.29
SH3RF3-201ENST00000309415 RTTNQ86VV8 2226 aa16.84■□□□□ 0.29
SH3RF3-201ENST00000309415 PLA2G2CQ5R387 149 aa16.84■□□□□ 0.29
SH3RF3-201ENST00000309415 M0R2P5 195 aa16.83■□□□□ 0.29
SH3RF3-201ENST00000309415 AMBPP02760 352 aa16.83■□□□□ 0.29
SH3RF3-201ENST00000309415 LYPD1Q8N2G4 141 aa16.83■□□□□ 0.29
SH3RF3-201ENST00000309415 D6R8Y8 96 aa16.83■□□□□ 0.28
SH3RF3-201ENST00000309415 NPC2P61916 151 aa16.83■□□□□ 0.28
SH3RF3-201ENST00000309415 GATD1Q8NB37 220 aa16.83■□□□□ 0.28
SH3RF3-201ENST00000309415 LHFPL1Q86WI0 220 aa16.82■□□□□ 0.28
SH3RF3-201ENST00000309415 C14orf178Q8N769 122 aaPredicted RBP16.82■□□□□ 0.28
SH3RF3-201ENST00000309415 PRSS33Q8NF86 280 aa16.82■□□□□ 0.28
SH3RF3-201ENST00000309415 SMPXQ9UHP9 88 aa16.82■□□□□ 0.28
SH3RF3-201ENST00000309415 TMEM238C9JI98 176 aa16.82■□□□□ 0.28
SH3RF3-201ENST00000309415 APOC4P55056 127 aa16.82■□□□□ 0.28
SH3RF3-201ENST00000309415 ESPL1Q14674 2120 aa16.82■□□□□ 0.28
SH3RF3-201ENST00000309415 C5orf30Q96GV9 206 aa16.82■□□□□ 0.28
SH3RF3-201ENST00000309415 XCL2Q9UBD3 114 aa16.82■□□□□ 0.28
SH3RF3-201ENST00000309415 ZNF562Q6V9R5 426 aa16.81■□□□□ 0.28
SH3RF3-201ENST00000309415 C1orf122Q6ZSJ8 110 aa16.81■□□□□ 0.28
SH3RF3-201ENST00000309415 FOXL2NBQ6ZUU3 175 aa16.81■□□□□ 0.28
SH3RF3-201ENST00000309415 PLEKHB2Q96CS7 222 aa16.81■□□□□ 0.28
SH3RF3-201ENST00000309415 SBF1O95248 1867 aa16.81■□□□□ 0.28
SH3RF3-201ENST00000309415 NMSQ5H8A3 153 aa16.81■□□□□ 0.28
SH3RF3-201ENST00000309415 CSTL1Q9H114 145 aa16.81■□□□□ 0.28
SH3RF3-201ENST00000309415 C21orf62-AS1Q17RA5 79 aa16.81■□□□□ 0.28
SH3RF3-201ENST00000309415 EREGO14944 169 aa16.8■□□□□ 0.28
SH3RF3-201ENST00000309415 CFHR2P36980 270 aa16.8■□□□□ 0.28
SH3RF3-201ENST00000309415 LINC01559Q495D7 138 aa16.8■□□□□ 0.28
SH3RF3-201ENST00000309415 C5orf24Q7Z6I8 188 aa16.8■□□□□ 0.28
SH3RF3-201ENST00000309415 AGMATQ9BSE5 352 aa16.8■□□□□ 0.28
SH3RF3-201ENST00000309415 CACNA1GO43497 2377 aa16.8■□□□□ 0.28
SH3RF3-201ENST00000309415 A0A087WWL8 130 aa16.8■□□□□ 0.28
SH3RF3-201ENST00000309415 TRAV8-2A0A0B4J237 113 aa16.79■□□□□ 0.28
SH3RF3-201ENST00000309415 TRAV13-1A0A0B4J241 112 aa16.79■□□□□ 0.28
SH3RF3-201ENST00000309415 Q8TCH9 128 aa16.79■□□□□ 0.28
SH3RF3-201ENST00000309415 A8MXK9 166 aa16.79■□□□□ 0.28
SH3RF3-201ENST00000309415 RNASE2P10153 161 aaKnown RBP16.79■□□□□ 0.28
SH3RF3-201ENST00000309415 TMEM14EPQ6UXP3 125 aa16.79■□□□□ 0.28
SH3RF3-201ENST00000309415 H3BUT2 72 aa16.79■□□□□ 0.28
SH3RF3-201ENST00000309415 LINC00205P59089 165 aa16.79■□□□□ 0.28
SH3RF3-201ENST00000309415 IGKV1-16P04430 117 aa16.78■□□□□ 0.28
SH3RF3-201ENST00000309415 NTF4P34130 210 aa16.78■□□□□ 0.28
SH3RF3-201ENST00000309415 REG4Q9BYZ8 158 aa16.78■□□□□ 0.28
SH3RF3-201ENST00000309415 MST1LQ2TV78 715 aa16.78■□□□□ 0.28
SH3RF3-201ENST00000309415 MTURNQ8N3F0 131 aa16.78■□□□□ 0.28
SH3RF3-201ENST00000309415 INS-IGF2F8WCM5 200 aa16.78■□□□□ 0.28
SH3RF3-201ENST00000309415 CFHR3Q02985 330 aa16.78■□□□□ 0.28
SH3RF3-201ENST00000309415 FAM90A2PQ658T7 463 aa16.78■□□□□ 0.28
SH3RF3-201ENST00000309415 IL17RELQ6ZVW7 336 aa16.78■□□□□ 0.28
SH3RF3-201ENST00000309415 SRSF3P84103 164 aaKnown RBP16.77■□□□□ 0.28
SH3RF3-201ENST00000309415 ATXN8Q156A1 80 aa16.77■□□□□ 0.27
SH3RF3-201ENST00000309415 THSD7BQ9C0I4 1608 aa16.77■□□□□ 0.27
SH3RF3-201ENST00000309415 TRAV9-2A0A087WT02 112 aa16.77■□□□□ 0.27
SH3RF3-201ENST00000309415 SHANK2-AS3Q9BTD1 123 aa16.77■□□□□ 0.27
SH3RF3-201ENST00000309415 ZMAT4Q9H898 229 aa16.76■□□□□ 0.27
SH3RF3-201ENST00000309415 ERG28Q9UKR5 140 aa16.76■□□□□ 0.27
SH3RF3-201ENST00000309415 LY6G6EA0A0G2JKS1 128 aa16.76■□□□□ 0.27
SH3RF3-201ENST00000309415 LAMTOR3Q9UHA4 124 aa16.76■□□□□ 0.27
SH3RF3-201ENST00000309415 U3KQA8 63 aa16.76■□□□□ 0.27
SH3RF3-201ENST00000309415 A0A1B0GV90 55 aa16.75■□□□□ 0.27
SH3RF3-201ENST00000309415 ZNRD1Q9P1U0 126 aa16.75■□□□□ 0.27
SH3RF3-201ENST00000309415 ITGB1BP1O14713 200 aa16.75■□□□□ 0.27
SH3RF3-201ENST00000309415 DKK1O94907 266 aa16.75■□□□□ 0.27
SH3RF3-201ENST00000309415 SDK2Q58EX2 2172 aa16.75■□□□□ 0.27
SH3RF3-201ENST00000309415 A0A1W2PPI3 338 aa16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 ZNF561-AS1K7EIQ3 104 aa16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 MS4A6AQ9H2W1 248 aa16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 CGB3P0DN86 165 aa16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 SSBP2P81877 361 aaPredicted RBP16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 G3V318 75 aa16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 RNF144BQ7Z419 303 aa16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 LINC00518Q8N0U6 118 aa16.74■□□□□ 0.27
SH3RF3-201ENST00000309415 NDUFB8O95169 186 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 Q6ZS49 121 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 ZNF581Q9P0T4 197 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 GAGE12JA6NER3 117 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 GAGE1Q13065 139 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 GAGE4Q13068 117 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 GAGE5Q13069 117 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 SPINK13Q1W4C9 94 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 GAGE13Q4V321 117 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 PRR31Q5SQ13 230 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 C15orf62A8K5M9 175 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 RASL11AQ6T310 242 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 TRPT1Q86TN4 253 aaKnown RBP16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 HAPLN4Q86UW8 402 aa16.73■□□□□ 0.27
SH3RF3-201ENST00000309415 COL4A6Q14031 1691 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms