RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 GPR82Q96P67 336 aa18.35■□□□□ 0.53
HOXC9-201ENST00000303450 KANTRA0A1W2PQU2 76 aa18.34■□□□□ 0.53
HOXC9-201ENST00000303450 PFDN1O60925 122 aa18.34■□□□□ 0.53
HOXC9-201ENST00000303450 ATP6V0CP27449 155 aa18.34■□□□□ 0.53
HOXC9-201ENST00000303450 DEFA6Q01524 100 aa18.34■□□□□ 0.53
HOXC9-201ENST00000303450 SLC25A32Q9H2D1 315 aa18.34■□□□□ 0.53
HOXC9-201ENST00000303450 RFNGQ9Y644 331 aa18.34■□□□□ 0.53
HOXC9-201ENST00000303450 GALR1P47211 349 aa18.33■□□□□ 0.53
HOXC9-201ENST00000303450 CD81P60033 236 aa18.33■□□□□ 0.53
HOXC9-201ENST00000303450 TMUB2Q71RG4 321 aa18.33■□□□□ 0.53
HOXC9-201ENST00000303450 PSMG3Q9BT73 122 aaPredicted RBP18.33■□□□□ 0.53
HOXC9-201ENST00000303450 CYTL1Q9NRR1 136 aa18.33■□□□□ 0.53
HOXC9-201ENST00000303450 BCL2L11O43521 198 aa18.33■□□□□ 0.52
HOXC9-201ENST00000303450 RPL7P18124 248 aaKnown RBP18.33■□□□□ 0.52
HOXC9-201ENST00000303450 GNPNAT1Q96EK6 184 aaPredicted RBP18.33■□□□□ 0.52
HOXC9-201ENST00000303450 CD7P09564 240 aa18.32■□□□□ 0.52
HOXC9-201ENST00000303450 FAM78BQ5VT40 261 aa18.32■□□□□ 0.52
HOXC9-201ENST00000303450 NRN1Q9NPD7 142 aa18.32■□□□□ 0.52
HOXC9-201ENST00000303450 TRAV2A0A0B4J234 112 aa18.31■□□□□ 0.52
HOXC9-201ENST00000303450 ACOT6Q3I5F7 207 aaPredicted RBP18.31■□□□□ 0.52
HOXC9-201ENST00000303450 LGALSLQ3ZCW2 172 aaPredicted RBP18.31■□□□□ 0.52
HOXC9-201ENST00000303450 MORN5Q5VZ52 161 aa18.31■□□□□ 0.52
HOXC9-201ENST00000303450 SH3BGRL3Q9H299 93 aa18.31■□□□□ 0.52
HOXC9-201ENST00000303450 OR2G3Q8NGZ4 309 aa18.3■□□□□ 0.52
HOXC9-201ENST00000303450 ZNF471Q9BX82 626 aaPredicted RBP18.3■□□□□ 0.52
HOXC9-201ENST00000303450 SEPSECSQ9HD40 501 aaKnown RBP18.3■□□□□ 0.52
HOXC9-201ENST00000303450 FBN3Q75N90 2809 aa18.29■□□□□ 0.52
HOXC9-201ENST00000303450 TRAV5A0A0B4J249 113 aa18.29■□□□□ 0.52
HOXC9-201ENST00000303450 K7EIL1 84 aa18.29■□□□□ 0.52
HOXC9-201ENST00000303450 SERF2P84101 59 aa18.29■□□□□ 0.52
HOXC9-201ENST00000303450 BPIFA4PQ86YQ2 179 aa18.29■□□□□ 0.52
HOXC9-201ENST00000303450 DCANP1Q8TF63 244 aa18.29■□□□□ 0.52
HOXC9-201ENST00000303450 K7EQG2 157 aa18.28■□□□□ 0.52
HOXC9-201ENST00000303450 ATF4P18848 351 aaPredicted RBP18.28■□□□□ 0.52
HOXC9-201ENST00000303450 M6PRP20645 277 aa18.28■□□□□ 0.52
HOXC9-201ENST00000303450 Q8N1Y9 231 aa18.28■□□□□ 0.52
HOXC9-201ENST00000303450 MRPL32Q9BYC8 188 aaKnown RBP18.28■□□□□ 0.52
HOXC9-201ENST00000303450 SMAD5-AS1Q9Y6J3 95 aa18.28■□□□□ 0.52
HOXC9-201ENST00000303450 FUT9Q9Y231 359 aa18.28■□□□□ 0.52
HOXC9-201ENST00000303450 CMC4P56277 68 aaPredicted RBP18.27■□□□□ 0.51
HOXC9-201ENST00000303450 RHOBP62745 196 aa18.27■□□□□ 0.51
HOXC9-201ENST00000303450 SPATA31B1PQ5VZV4 182 aa18.27■□□□□ 0.51
HOXC9-201ENST00000303450 MIR17HGQ75NE6 70 aa18.27■□□□□ 0.51
HOXC9-201ENST00000303450 UBQLN2Q9UHD9 624 aa18.27■□□□□ 0.51
HOXC9-201ENST00000303450 OR11H12B2RN74 326 aa18.26■□□□□ 0.51
HOXC9-201ENST00000303450 MBP02144 154 aa18.26■□□□□ 0.51
HOXC9-201ENST00000303450 MEOX2P50222 304 aa18.26■□□□□ 0.51
HOXC9-201ENST00000303450 RAB2AP61019 212 aa18.26■□□□□ 0.51
HOXC9-201ENST00000303450 EIF5AP63241 154 aaKnown RBP18.26■□□□□ 0.51
HOXC9-201ENST00000303450 DEFB121Q5J5C9 76 aa18.26■□□□□ 0.51
HOXC9-201ENST00000303450 OR10G4Q8NGN3 311 aa18.26■□□□□ 0.51
HOXC9-201ENST00000303450 OR10G9Q8NGN4 311 aa18.26■□□□□ 0.51
HOXC9-201ENST00000303450 OR10G7Q8NGN6 311 aa18.26■□□□□ 0.51
HOXC9-201ENST00000303450 MRAPQ8TCY5 172 aa18.26■□□□□ 0.51
HOXC9-201ENST00000303450 MEGF8Q7Z7M0 2845 aa18.25■□□□□ 0.51
HOXC9-201ENST00000303450 ODF3L2Q3SX64 289 aa18.25■□□□□ 0.51
HOXC9-201ENST00000303450 FAM24BQ8N5W8 94 aa18.25■□□□□ 0.51
HOXC9-201ENST00000303450 A0A1W2PPV4 95 aa18.24■□□□□ 0.51
HOXC9-201ENST00000303450 MRPS12O15235 138 aaKnown RBP18.24■□□□□ 0.51
HOXC9-201ENST00000303450 SAMD13Q5VXD3 122 aa18.24■□□□□ 0.51
HOXC9-201ENST00000303450 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.24■□□□□ 0.51
HOXC9-201ENST00000303450 C9orf62Q8N4C0 152 aa18.24■□□□□ 0.51
HOXC9-201ENST00000303450 FAM110AQ9BQ89 295 aa18.24■□□□□ 0.51
HOXC9-201ENST00000303450 WFDC10AQ9H1F0 79 aa18.24■□□□□ 0.51
HOXC9-201ENST00000303450 C19orf73Q9NVV2 129 aa18.24■□□□□ 0.51
HOXC9-201ENST00000303450 ZNF688P0C7X2 276 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 SPP1P10451 314 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 C4BPBP20851 252 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 ID1P41134 155 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 SNRPD3P62318 126 aaKnown RBP18.23■□□□□ 0.51
HOXC9-201ENST00000303450 FAM122CQ6P4D5 195 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 DEFB125Q8N687 156 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 SLC25A2Q9BXI2 301 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 MAP6D1Q9H9H5 199 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 A0A087X0K7 114 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 TPT1P13693 172 aaKnown RBP18.23■□□□□ 0.51
HOXC9-201ENST00000303450 C16orf92Q96LL3 132 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 C17orf77Q96MU5 243 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 TMEM14CQ9P0S9 112 aa18.23■□□□□ 0.51
HOXC9-201ENST00000303450 SNRPCP09234 159 aaKnown RBP18.22■□□□□ 0.51
HOXC9-201ENST00000303450 NKX2-5P52952 324 aaPredicted RBP18.22■□□□□ 0.51
HOXC9-201ENST00000303450 TAS2R45P59539 299 aa18.22■□□□□ 0.51
HOXC9-201ENST00000303450 DEFB131AP59861 70 aa18.22■□□□□ 0.51
HOXC9-201ENST00000303450 TMEM41BQ5BJD5 291 aa18.22■□□□□ 0.51
HOXC9-201ENST00000303450 AKR1C8PQ5T2L2 129 aa18.22■□□□□ 0.51
HOXC9-201ENST00000303450 BAP18Q8IXM2 172 aa18.22■□□□□ 0.51
HOXC9-201ENST00000303450 LRRC20Q8TCA0 184 aa18.22■□□□□ 0.51
HOXC9-201ENST00000303450 FAM167A-AS1Q96KT0 104 aa18.22■□□□□ 0.51
HOXC9-201ENST00000303450 TUBA4BQ9H853 241 aa18.22■□□□□ 0.51
HOXC9-201ENST00000303450 ISLRO14498 428 aa18.21■□□□□ 0.51
HOXC9-201ENST00000303450 SOCS3O14543 225 aa18.21■□□□□ 0.51
HOXC9-201ENST00000303450 IGLC2P0DOY2 106 aa18.21■□□□□ 0.51
HOXC9-201ENST00000303450 IGHV4-30-4P0DP06 118 aa18.21■□□□□ 0.51
HOXC9-201ENST00000303450 PSMG4Q5JS54 123 aa18.21■□□□□ 0.51
HOXC9-201ENST00000303450 HRH4Q9H3N8 390 aa18.21■□□□□ 0.51
HOXC9-201ENST00000303450 OR7C2O60412 319 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 PYYP10082 97 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 CDC34P49427 236 aaPredicted RBP18.2■□□□□ 0.5
HOXC9-201ENST00000303450 PSMB3P49720 205 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 KHDC3LQ587J8 217 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms