RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MORN5Q5VZ52 161 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 RCHY1Q96PM5 261 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 LILRA1O75019 489 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 IGLC2P0DOY2 106 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 IGLC3P0DOY3 106 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 C3orf36Q3SXR2 165 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 PRIMA1Q86XR5 153 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 RPUSD1Q9UJJ7 312 aaKnown RBP12.19□□□□□ -0.46
SCN3B-201ENST00000299333 TIMM23O14925 209 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 LYPD3O95274 346 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 C1orf159Q96HA4 380 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 NTF4P34130 210 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 C6orf226Q5I0X4 101 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 IGFL4Q6B9Z1 124 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 C1orf162Q8NEQ5 155 aaPredicted RBP12.19□□□□□ -0.46
SCN3B-201ENST00000299333 ANAPC10Q9UM13 185 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 DOCK5Q9H7D0 1870 aa12.19□□□□□ -0.46
SCN3B-201ENST00000299333 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
SCN3B-201ENST00000299333 LINC00527Q9UJ94 153 aa12.18□□□□□ -0.46
SCN3B-201ENST00000299333 FNDC10F2Z333 226 aa12.18□□□□□ -0.46
SCN3B-201ENST00000299333 UCNP55089 124 aa12.18□□□□□ -0.46
SCN3B-201ENST00000299333 LOC102723996A0A087X1L8 192 aa12.18□□□□□ -0.46
SCN3B-201ENST00000299333 C5orf24Q7Z6I8 188 aa12.18□□□□□ -0.46
SCN3B-201ENST00000299333 VGLL1Q99990 258 aa12.18□□□□□ -0.46
SCN3B-201ENST00000299333 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.18□□□□□ -0.46
SCN3B-201ENST00000299333 FOXF2Q12947 444 aa12.18□□□□□ -0.46
SCN3B-201ENST00000299333 ZCCHC24Q8N2G6 241 aaKnown RBP12.17□□□□□ -0.46
SCN3B-201ENST00000299333 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 SRRM4A7MD48 611 aaKnown RBP12.17□□□□□ -0.46
SCN3B-201ENST00000299333 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
SCN3B-201ENST00000299333 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 PLXNB2O15031 1838 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 F8WEM9 126 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 STPG1Q5TH74 334 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 C18orf32Q8TCD1 76 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 SVILO95425 2214 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 A0A087WX48 190 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 MST1LQ2TV78 715 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 MYO16Q9Y6X6 1858 aa12.17□□□□□ -0.46
SCN3B-201ENST00000299333 PRR19A6NJB7 356 aa12.16□□□□□ -0.46
SCN3B-201ENST00000299333 Q6ZWC4 215 aa12.16□□□□□ -0.46
SCN3B-201ENST00000299333 ZNF329Q86UD4 541 aa12.16□□□□□ -0.46
SCN3B-201ENST00000299333 NEU4Q8WWR8 484 aaPredicted RBP12.16□□□□□ -0.46
SCN3B-201ENST00000299333 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
SCN3B-201ENST00000299333 STRCP1A6NGW2 1772 aa12.16□□□□□ -0.46
SCN3B-201ENST00000299333 A0A087WWL8 130 aa12.16□□□□□ -0.46
SCN3B-201ENST00000299333 SRSF2Q01130 221 aaKnown RBP12.16□□□□□ -0.46
SCN3B-201ENST00000299333 CCL25O15444 150 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 ARMS2P0C7Q2 107 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 ERCC8Q13216 396 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 SPSB3Q6PJ21 355 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 FGFBP3Q8TAT2 258 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 SRSF7Q16629 238 aaKnown RBP eCLIP12.15□□□□□ -0.46
SCN3B-201ENST00000299333 IGKV1-27A0A075B6S5 117 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 SLC25A16P16260 332 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 LY6G5BQ8NDX9 201 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 SPTSSBQ8NFR3 76 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 BAALCQ8WXS3 180 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 CACNA1IQ9P0X4 2223 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 RPL36AP83881 106 aaKnown RBP12.15□□□□□ -0.46
SCN3B-201ENST00000299333 RPL36ALQ969Q0 106 aaKnown RBP12.15□□□□□ -0.46
SCN3B-201ENST00000299333 TRGV9Q99603 122 aa12.15□□□□□ -0.46
SCN3B-201ENST00000299333 C15orf32Q32M92 178 aa12.15□□□□□ -0.47
SCN3B-201ENST00000299333 ALPK2Q86TB3 2170 aa12.15□□□□□ -0.47
SCN3B-201ENST00000299333 LRRC37AA6NMS7 1700 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 NDPQ00604 133 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 AMTNQ6UX39 209 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 Q6ZVH6 145 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 LYNX1G3V0Z9 82 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 LYNX1P0DP58 116 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 A0A1W2PPI3 338 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 SAP30O75446 220 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 IGLL1P15814 213 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 VDAC2P45880 294 aaPredicted RBP12.14□□□□□ -0.47
SCN3B-201ENST00000299333 ESPL1Q14674 2120 aa12.14□□□□□ -0.47
SCN3B-201ENST00000299333 TRIP12Q14669 1992 aaPredicted RBP12.14□□□□□ -0.47
SCN3B-201ENST00000299333 TRGV1A0A0A0MS02 117 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 PFN1P07737 140 aaKnown RBP12.13□□□□□ -0.47
SCN3B-201ENST00000299333 LYL1P12980 280 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 CFHR2P36980 270 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 C9orf106Q8NAJ2 232 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 NEGR1Q7Z3B1 354 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 DTX2Q86UW9 622 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 TMEM213A2RRL7 107 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 FAM166AQ6J272 317 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 Q86TA4 180 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 FAM168AQ92567 244 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 APC2O95996 2303 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 FGF6P10767 208 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 K7ERJ3 54 aa12.13□□□□□ -0.47
SCN3B-201ENST00000299333 MCM3APO60318 1980 aa12.12□□□□□ -0.47
SCN3B-201ENST00000299333 GFRA4Q9GZZ7 299 aa12.12□□□□□ -0.47
SCN3B-201ENST00000299333 C15orf62A8K5M9 175 aa12.12□□□□□ -0.47
SCN3B-201ENST00000299333 FAM186AA6NE01 2351 aa12.11□□□□□ -0.47
SCN3B-201ENST00000299333 A0A0G2JRQ6 117 aa12.11□□□□□ -0.47
SCN3B-201ENST00000299333 CRYGSP22914 178 aa12.11□□□□□ -0.47
SCN3B-201ENST00000299333 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
SCN3B-201ENST00000299333 NTN5Q8WTR8 489 aaPredicted RBP12.11□□□□□ -0.47
SCN3B-201ENST00000299333 LIME1Q9H400 295 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms