RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 GFRA4Q9GZZ7 299 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 RLFQ13129 1914 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 YPEL3P61236 119 aaPredicted RBP11.57□□□□□ -0.56
COL1A2-201ENST00000297268 GAFA1Q96PS6 74 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 CHAC1Q9BUX1 264 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 TDGF1P13385 188 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 OVOL1O14753 267 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 IGKV1-16P04430 117 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.57□□□□□ -0.56
COL1A2-201ENST00000297268 RBMY1BA6NDE4 496 aaKnown RBP11.57□□□□□ -0.56
COL1A2-201ENST00000297268 RBMY1EA6NEQ0 496 aaKnown RBP11.57□□□□□ -0.56
COL1A2-201ENST00000297268 HAX1O00165 279 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 RBMY1DP0C7P1 496 aaKnown RBP11.57□□□□□ -0.56
COL1A2-201ENST00000297268 RBMY1A1P0DJD3 496 aaKnown RBP11.57□□□□□ -0.56
COL1A2-201ENST00000297268 RBMY1CP0DJD4 496 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 TMEM105Q8N8V8 129 aa11.57□□□□□ -0.56
COL1A2-201ENST00000297268 DLX4Q92988 240 aaPredicted RBP11.57□□□□□ -0.56
COL1A2-201ENST00000297268 FAM231BA6NCW3 169 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 WNT2P09544 360 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 ADAMTSL5Q6ZMM2 481 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 TRIOBPQ9H2D6 2365 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 CACNA1EQ15878 2313 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 ARMS2P0C7Q2 107 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 PAX8Q06710 450 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 WFDC12Q8WWY7 111 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 LINC01549A6NIU2 74 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 COLCA1Q6ZS62 124 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 SLC25A15Q9Y619 301 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 IL15RAQ13261 267 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 ZNF114Q8NC26 417 aa11.56□□□□□ -0.56
COL1A2-201ENST00000297268 TSC2P49815 1807 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 C15orf32Q32M92 178 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 LYPD1Q8N2G4 141 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 DEFB104AQ8WTQ1 72 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 TRPM7Q96QT4 1865 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 V9GYV3 84 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 TMEM238C9JI98 176 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 M0R2P5 195 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 TMEM155Q4W5P6 130 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 PGPEP1Q9NXJ5 209 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 A0A0U1RRA0 63 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 TMEM178BH3BS89 294 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 IGFL4Q6B9Z1 124 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 NUP37Q8NFH4 326 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 KLF2Q9Y5W3 355 aaPredicted RBP11.55□□□□□ -0.56
COL1A2-201ENST00000297268 KIAA2026Q5HYC2 2103 aa11.55□□□□□ -0.56
COL1A2-201ENST00000297268 LYPD6BQ8NI32 183 aa11.54□□□□□ -0.56
COL1A2-201ENST00000297268 GVINP1Q7Z2Y8 2422 aa11.54□□□□□ -0.56
COL1A2-201ENST00000297268 SLAQ13239 276 aa11.54□□□□□ -0.56
COL1A2-201ENST00000297268 ATXN8Q156A1 80 aa11.54□□□□□ -0.56
COL1A2-201ENST00000297268 C7orf69Q9H7B7 122 aa11.54□□□□□ -0.56
COL1A2-201ENST00000297268 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.54□□□□□ -0.56
COL1A2-201ENST00000297268 ETV2O00321 342 aaPredicted RBP11.54□□□□□ -0.56
COL1A2-201ENST00000297268 SRD5A1P18405 259 aa11.54□□□□□ -0.56
COL1A2-201ENST00000297268 SIGLEC9Q9Y336 463 aa11.54□□□□□ -0.56
COL1A2-201ENST00000297268 FANCMQ8IYD8 2048 aa11.54□□□□□ -0.56
COL1A2-201ENST00000297268 TMEM8BA6NDV4 472 aa11.53□□□□□ -0.56
COL1A2-201ENST00000297268 GAGE1Q13065 139 aa11.53□□□□□ -0.56
COL1A2-201ENST00000297268 HAPLN4Q86UW8 402 aa11.53□□□□□ -0.56
COL1A2-201ENST00000297268 LINC00527Q9UJ94 153 aa11.53□□□□□ -0.56
COL1A2-201ENST00000297268 RNF5Q99942 180 aa11.53□□□□□ -0.56
COL1A2-201ENST00000297268 ZNF492Q9P255 531 aa11.53□□□□□ -0.56
COL1A2-201ENST00000297268 SRSF6Q13247 344 aaKnown RBP11.53□□□□□ -0.56
COL1A2-201ENST00000297268 IGLL1P15814 213 aa11.53□□□□□ -0.56
COL1A2-201ENST00000297268 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
COL1A2-201ENST00000297268 NPC2P61916 151 aa11.53□□□□□ -0.56
COL1A2-201ENST00000297268 TCF20Q9UGU0 1960 aaKnown RBP11.52□□□□□ -0.56
COL1A2-201ENST00000297268 DUSP14O95147 198 aaKnown RBP11.52□□□□□ -0.56
COL1A2-201ENST00000297268 DPH3P1Q9H4G8 78 aa11.52□□□□□ -0.56
COL1A2-201ENST00000297268 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.52□□□□□ -0.57
COL1A2-201ENST00000297268 FAM168AQ92567 244 aa11.52□□□□□ -0.57
COL1A2-201ENST00000297268 NPFFR1Q9GZQ6 430 aa11.52□□□□□ -0.57
COL1A2-201ENST00000297268 TMEM14BQ9NUH8 114 aa11.52□□□□□ -0.57
COL1A2-201ENST00000297268 CEP250Q9BV73 2442 aa11.52□□□□□ -0.57
COL1A2-201ENST00000297268 TRGV2A0A075B6R0 118 aa11.52□□□□□ -0.57
COL1A2-201ENST00000297268 GGTLC3B5MD39 225 aa11.52□□□□□ -0.57
COL1A2-201ENST00000297268 CFHR2P36980 270 aa11.52□□□□□ -0.57
COL1A2-201ENST00000297268 TRGV11A0A075B6L2 103 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 TMEM213A2RRL7 107 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 THBDP07204 575 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 KLRD1Q13241 179 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 ZDBF2Q9HCK1 2354 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 TRAV40A0A0B4J280 105 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 ZNF474Q6S9Z5 364 aaPredicted RBP11.51□□□□□ -0.57
COL1A2-201ENST00000297268 TEX43Q6ZNM6 134 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 CSRP1P21291 193 aaKnown RBP11.51□□□□□ -0.57
COL1A2-201ENST00000297268 ZNRD1Q9P1U0 126 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 A0A1W2PPI3 338 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 SMIM27A0A1W2PRY6 76 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 SPINK8P0C7L1 97 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 CT83Q5H943 113 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 C14orf178Q8N769 122 aaPredicted RBP11.51□□□□□ -0.57
COL1A2-201ENST00000297268 MDS2Q8NDY4 140 aa11.51□□□□□ -0.57
COL1A2-201ENST00000297268 BUB1B-PAK6H3BSN5 160 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 TNFRSF6BO95407 300 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms