RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PLSCR4Q9NRQ2 329 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 MED12Q93074 2177 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 PMS2P5A8MQ11 134 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 VWC2LB2RUY7 222 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 HGFACQ04756 655 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 NEU4Q8WWR8 484 aaPredicted RBP8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 RSPO3Q9BXY4 272 aaPredicted RBP8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 SYS1-DBNDD2H3BUS1 97 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 SMAD7O15105 426 aaKnown RBP8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 TFF1P04155 84 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 ZNF883P0CG24 379 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 IGKV2-40A0A087WW87 121 aaPredicted RBP8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 IGKV2D-40P01614 121 aaPredicted RBP8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 TCRAP04437 139 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 TMEM133Q9H2Q1 129 aa8.86□□□□□ -0.99
PKNOX1-201ENST00000291547 IGHV1-2P23083 117 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 EXOC3-AS1Q8N2X6 119 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 DOCK9Q9BZ29 2069 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 RALGAPA1Q6GYQ0 2036 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 IGHV2-26A0A0B4J1V2 119 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 TGFBR3LH3BV60 316 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 STPG4Q8N801 248 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 C9JAW5 83 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 OVOL1O14753 267 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 PFN1P07737 140 aaKnown RBP8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 ZNF688P0C7X2 276 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 RASL11AQ6T310 242 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 Q8NFD4 153 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 A0A087WX48 190 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 A0A0A6YYD4 124 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 Q0VG73 95 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 C10orf55Q5SWW7 151 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 C9orf153Q5TBE3 101 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 GAGE2AQ6NT46 116 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 LYZL4Q96KX0 146 aa8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 MCRIP2Q9BUT9 160 aaKnown RBP8.85□□□□□ -0.99
PKNOX1-201ENST00000291547 HELZP42694 1942 aaKnown RBP8.84□□□□□ -0.99
PKNOX1-201ENST00000291547 SRD5A1P18405 259 aa8.84□□□□□ -0.99
PKNOX1-201ENST00000291547 ZNF138P52744 262 aa8.84□□□□□ -0.99
PKNOX1-201ENST00000291547 FAM90A2PQ658T7 463 aa8.84□□□□□ -0.99
PKNOX1-201ENST00000291547 BMPERQ8N8U9 685 aa8.84□□□□□ -0.99
PKNOX1-201ENST00000291547 PRO3102Q9H379 93 aa8.84□□□□□ -0.99
PKNOX1-201ENST00000291547 COLCA1Q6ZS62 124 aa8.84□□□□□ -0.99
PKNOX1-201ENST00000291547 FAM90A9PA6NNJ1 464 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 NUP35Q8NFH5 326 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 ZNF415Q09FC8 603 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 RASL10AQ92737 203 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 RFNGQ9Y644 331 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 TIMM23O14925 209 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 SUPT4H1P63272 117 aaKnown RBP8.83□□□□□ -1
PKNOX1-201ENST00000291547 PAX8Q06710 450 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 CSRP2Q16527 193 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 TMEM158Q8WZ71 300 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 FAM168AQ92567 244 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 DPH3P1Q9H4G8 78 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 MRPL27Q9P0M9 148 aaKnown RBP8.83□□□□□ -1
PKNOX1-201ENST00000291547 ZNF474Q6S9Z5 364 aaPredicted RBP8.83□□□□□ -1
PKNOX1-201ENST00000291547 CHAC1Q9BUX1 264 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 KLF12Q9Y4X4 402 aa8.83□□□□□ -1
PKNOX1-201ENST00000291547 INS-IGF2F8WCM5 200 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 INSP01308 110 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 C3orf36Q3SXR2 165 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 LHFPL1Q86WI0 220 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 ZCCHC24Q8N2G6 241 aaKnown RBP8.82□□□□□ -1
PKNOX1-201ENST00000291547 IGHV3-73A0A0B4J1V6 119 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 IL18BPO95998 194 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 RPL15P61313 204 aaKnown RBP8.82□□□□□ -1
PKNOX1-201ENST00000291547 DNAJC30Q96LL9 226 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 VGLL1Q99990 258 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 CDK2AP2O75956 126 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 SIGLEC15Q6ZMC9 328 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 THADAQ6YHU6 1953 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 VCYO14598 125 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 FOXF2Q12947 444 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 LCNL1Q6ZST4 164 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 ANAPC10Q9UM13 185 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 CACNA1HO95180 2353 aa8.82□□□□□ -1
PKNOX1-201ENST00000291547 AZU1P20160 251 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 KIF26BQ2KJY2 2108 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 C6orf226Q5I0X4 101 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 C1orf159Q96HA4 380 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 LINC00527Q9UJ94 153 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 C2orf16Q68DN1 1984 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 IGKV1-12A0A0C4DH73 117 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 IGKV1D-12P01611 117 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 SPSB3Q6PJ21 355 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 CACNA1BQ00975 2339 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 MYLKQ15746 1914 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 RPL36AP83881 106 aaKnown RBP8.81□□□□□ -1
PKNOX1-201ENST00000291547 RPL36ALQ969Q0 106 aaKnown RBP8.81□□□□□ -1
PKNOX1-201ENST00000291547 SLC25A39Q9BZJ4 359 aaPredicted RBP8.81□□□□□ -1
PKNOX1-201ENST00000291547 SCN8AQ9UQD0 1980 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 SRRM4A7MD48 611 aaKnown RBP8.81□□□□□ -1
PKNOX1-201ENST00000291547 CDKN1AP38936 164 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 C16orf54Q6UWD8 224 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 DTX2Q86UW9 622 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 C9orf106Q8NAJ2 232 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 FLVCR1-AS1Q8TAF5 88 aa8.81□□□□□ -1
PKNOX1-201ENST00000291547 Q8TAT8 98 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms