RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 VMO1Q7Z5L0 202 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 ZNF114Q8NC26 417 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 C8orf49Q96NF6 230 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 C15orf32Q32M92 178 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 LYPD2Q6UXB3 125 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 RPRMLQ8N4K4 120 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 FAM168AQ92567 244 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 TRGV9Q99603 122 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 C20orf144Q9BQM9 153 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 LRRK1Q38SD2 2015 aa12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 RNASE2P10153 161 aaKnown RBP12.49□□□□□ -0.41
SHROOM4-201ENST00000289292 TMEM249Q2WGJ8 235 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 TMEM167AQ8TBQ9 72 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 CHAC1Q9BUX1 264 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 RP1L1Q8IWN7 2480 aaPredicted RBP12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 PAX8Q06710 450 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 WIPF3A6NGB9 483 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 M0R2P5 195 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 ARMS2P0C7Q2 107 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 C1orf147Q96MC9 270 aaPredicted RBP12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 LY96Q9Y6Y9 160 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 CFPP27918 469 aa12.48□□□□□ -0.41
SHROOM4-201ENST00000289292 TMEM213A2RRL7 107 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 CFHR2P36980 270 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 RBMY1BA6NDE4 496 aaKnown RBP12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 RBMY1EA6NEQ0 496 aaKnown RBP12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 RBMY1DP0C7P1 496 aaKnown RBP12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 ZNF883P0CG24 379 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 RBMY1A1P0DJD3 496 aaKnown RBP12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 RBMY1CP0DJD4 496 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 ASCL4Q6XD76 172 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 C17orf82Q86X59 251 aaPredicted RBP12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 RNASE6Q93091 150 aaKnown RBP12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 SLC25A15Q9Y619 301 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 A0A1B0GWJ7 208 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 TMEM8BA6NDV4 472 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 DLX4Q92988 240 aaPredicted RBP12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 TMEM178BH3BS89 294 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 HTN3P15516 51 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 Q86TA4 180 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 FER1L5A0AVI2 2057 aa12.47□□□□□ -0.41
SHROOM4-201ENST00000289292 IGKV1-39P01597 117 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 IGKV1D-39P04432 117 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 THBDP07204 575 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 C18orf32Q8TCD1 76 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 Q6ZS49 121 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 FOXL2NBQ6ZUU3 175 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 PF4P02776 101 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 Q0VG73 95 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 CSRP2Q16527 193 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 ANAPC10Q9UM13 185 aa12.46□□□□□ -0.41
SHROOM4-201ENST00000289292 THADAQ6YHU6 1953 aa12.46□□□□□ -0.42
SHROOM4-201ENST00000289292 TOMM40O96008 361 aa12.46□□□□□ -0.42
SHROOM4-201ENST00000289292 Q6ZVH6 145 aa12.46□□□□□ -0.42
SHROOM4-201ENST00000289292 PLSCR4Q9NRQ2 329 aa12.46□□□□□ -0.42
SHROOM4-201ENST00000289292 MAP1BP46821 2468 aaKnown RBP12.46□□□□□ -0.42
SHROOM4-201ENST00000289292 C14orf178Q8N769 122 aaPredicted RBP12.46□□□□□ -0.42
SHROOM4-201ENST00000289292 C11orf44Q8N8P7 122 aa12.46□□□□□ -0.42
SHROOM4-201ENST00000289292 TNFRSF6BO95407 300 aa12.45□□□□□ -0.42
SHROOM4-201ENST00000289292 TRAV40A0A0B4J280 105 aa12.45□□□□□ -0.42
SHROOM4-201ENST00000289292 SMPXQ9UHP9 88 aa12.45□□□□□ -0.42
SHROOM4-201ENST00000289292 SSBP2P81877 361 aaPredicted RBP12.45□□□□□ -0.42
SHROOM4-201ENST00000289292 FANCMQ8IYD8 2048 aa12.45□□□□□ -0.42
SHROOM4-201ENST00000289292 SLAQ13239 276 aa12.45□□□□□ -0.42
SHROOM4-201ENST00000289292 TSSC4Q9Y5U2 329 aaPredicted RBP12.45□□□□□ -0.42
SHROOM4-201ENST00000289292 ATXN8Q156A1 80 aa12.45□□□□□ -0.42
SHROOM4-201ENST00000289292 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
SHROOM4-201ENST00000289292 IGLC2P0DOY2 106 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 IGLC3P0DOY3 106 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 PLNP26678 52 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 DUX4L9Q6RFH8 374 aaPredicted RBP12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 ZNF672Q499Z4 452 aaPredicted RBP12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 LY6HO94772 140 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 CSTL1Q9H114 145 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 EDA2RQ9HAV5 297 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 C2orf82Q6UX34 121 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 UNQ6494/PRO21346Q6UXR6 183 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 STHQ8IWL8 128 aa12.44□□□□□ -0.42
SHROOM4-201ENST00000289292 PLXNA4Q9HCM2 1894 aa12.43□□□□□ -0.42
SHROOM4-201ENST00000289292 ZNF503-AS2A6NEH8 195 aa12.43□□□□□ -0.42
SHROOM4-201ENST00000289292 YAE1D1Q9NRH1 226 aa12.43□□□□□ -0.42
SHROOM4-201ENST00000289292 HIST1H4AP62805 103 aaKnown RBP12.43□□□□□ -0.42
SHROOM4-201ENST00000289292 BUB1B-PAK6H3BSN5 160 aa12.43□□□□□ -0.42
SHROOM4-201ENST00000289292 HAPLN4Q86UW8 402 aa12.43□□□□□ -0.42
SHROOM4-201ENST00000289292 A0A087WWL8 130 aa12.43□□□□□ -0.42
SHROOM4-201ENST00000289292 SIGLEC9Q9Y336 463 aa12.43□□□□□ -0.42
SHROOM4-201ENST00000289292 PLXNA2O75051 1894 aa12.43□□□□□ -0.42
SHROOM4-201ENST00000289292 KIAA2026Q5HYC2 2103 aa12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 TRAV41A0A0B4J266 112 aa12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 CD59P13987 128 aa12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 DPH3Q96FX2 82 aa12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 RCHY1Q96PM5 261 aa12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 CACNA1DQ01668 2161 aa12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 VDAC2P45880 294 aaPredicted RBP12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 CFAP161Q6P656 301 aa12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 WDR86Q86TI4 376 aa12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 V9GYV3 84 aa12.42□□□□□ -0.42
SHROOM4-201ENST00000289292 IGLL1P15814 213 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms