RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 LINC00477Q96M19 166 aa15.04■□□□□ -0
PCDH1-201ENST00000287008 MGST2Q99735 147 aa15.04■□□□□ -0
PCDH1-201ENST00000287008 SSBP4Q9BWG4 385 aaPredicted RBP15.04■□□□□ -0
PCDH1-201ENST00000287008 RFNGQ9Y644 331 aa15.04■□□□□ -0
PCDH1-201ENST00000287008 RNASE2P10153 161 aaKnown RBP15.04■□□□□ -0
PCDH1-201ENST00000287008 UBE2DNLQ8IWF7 75 aa15.04■□□□□ -0
PCDH1-201ENST00000287008 RPP25LQ8N5L8 163 aaKnown RBP15.04■□□□□ -0
PCDH1-201ENST00000287008 IGLV3-9A0A075B6K5 115 aa15.04■□□□□ -0
PCDH1-201ENST00000287008 SPATA31B1PQ5VZV4 182 aa15.04■□□□□ -0
PCDH1-201ENST00000287008 CFHR2P36980 270 aa15.04■□□□□ -0
PCDH1-201ENST00000287008 VGLL1Q99990 258 aa15.04■□□□□ -0
PCDH1-201ENST00000287008 J3QLI3 93 aa15.03■□□□□ -0
PCDH1-201ENST00000287008 LOXP28300 417 aaPredicted RBP15.03■□□□□ -0
PCDH1-201ENST00000287008 AGMATQ9BSE5 352 aa15.03■□□□□ -0
PCDH1-201ENST00000287008 JKAMPQ9P055 326 aa15.03■□□□□ -0
PCDH1-201ENST00000287008 TRGV1A0A0A0MS02 117 aa15.03■□□□□ -0
PCDH1-201ENST00000287008 TCRAP04437 139 aa15.03■□□□□ -0
PCDH1-201ENST00000287008 SRSF1Q07955 248 aaKnown RBP eCLIP15.03■□□□□ -0
PCDH1-201ENST00000287008 TSKUQ8WUA8 353 aa15.03■□□□□ -0
PCDH1-201ENST00000287008 PRB4P10163 310 aaPredicted RBP15.03■□□□□ -0
PCDH1-201ENST00000287008 NCOR1P1Q9H4R4 102 aa15.03■□□□□ -0
PCDH1-201ENST00000287008 ORMDL2Q53FV1 153 aa15.03■□□□□ -0
PCDH1-201ENST00000287008 FAM19A2Q8N3H0 131 aa15.03■□□□□ -0
PCDH1-201ENST00000287008 A0A1W2PPI3 338 aa15.02□□□□□ -0.01
PCDH1-201ENST00000287008 ATP6V0E1O15342 81 aa15.02□□□□□ -0.01
PCDH1-201ENST00000287008 WISP1O95388 367 aa15.02□□□□□ -0.01
PCDH1-201ENST00000287008 NTF4P34130 210 aa15.02□□□□□ -0.01
PCDH1-201ENST00000287008 ZNRD1Q9P1U0 126 aa15.02□□□□□ -0.01
PCDH1-201ENST00000287008 RPL36AP83881 106 aaKnown RBP15.02□□□□□ -0.01
PCDH1-201ENST00000287008 RPL36ALQ969Q0 106 aaKnown RBP15.02□□□□□ -0.01
PCDH1-201ENST00000287008 PTPRDP23468 1912 aa15.02□□□□□ -0.01
PCDH1-201ENST00000287008 C15orf62A8K5M9 175 aa15.01□□□□□ -0.01
PCDH1-201ENST00000287008 K7ERU9 68 aa15.01□□□□□ -0.01
PCDH1-201ENST00000287008 IGF2-ASQ6U949 168 aa15.01□□□□□ -0.01
PCDH1-201ENST00000287008 TRAV12-3A0A0B4J271 114 aa15.01□□□□□ -0.01
PCDH1-201ENST00000287008 FGF16O43320 207 aa15.01□□□□□ -0.01
PCDH1-201ENST00000287008 TOMM40O96008 361 aa15.01□□□□□ -0.01
PCDH1-201ENST00000287008 UBE2E2Q96LR5 201 aa15.01□□□□□ -0.01
PCDH1-201ENST00000287008 IGKV3D-20A0A0C4DH25 116 aa15.01□□□□□ -0.01
PCDH1-201ENST00000287008 REG4Q9BYZ8 158 aa15.01□□□□□ -0.01
PCDH1-201ENST00000287008 GFI1BQ5VTD9 330 aa15□□□□□ -0.01
PCDH1-201ENST00000287008 WDR81Q562E7 1941 aa15□□□□□ -0.01
PCDH1-201ENST00000287008 TNCP24821 2201 aa15□□□□□ -0.01
PCDH1-201ENST00000287008 LCN12Q6JVE5 192 aa15□□□□□ -0.01
PCDH1-201ENST00000287008 FAM110DQ8TAY7 271 aaPredicted RBP15□□□□□ -0.01
PCDH1-201ENST00000287008 INSP01308 110 aa15□□□□□ -0.01
PCDH1-201ENST00000287008 Q71RC1 249 aaPredicted RBP15□□□□□ -0.01
PCDH1-201ENST00000287008 LYPD1Q8N2G4 141 aa15□□□□□ -0.01
PCDH1-201ENST00000287008 TRAV1-1A0A0B4J248 108 aa15□□□□□ -0.01
PCDH1-201ENST00000287008 CA1P00915 261 aaPredicted RBP15□□□□□ -0.01
PCDH1-201ENST00000287008 HBDP02042 147 aa15□□□□□ -0.01
PCDH1-201ENST00000287008 PRDM13Q9H4Q3 707 aa15□□□□□ -0.01
PCDH1-201ENST00000287008 CD28P10747 220 aa14.99□□□□□ -0.01
PCDH1-201ENST00000287008 DEFB131AP59861 70 aa14.99□□□□□ -0.01
PCDH1-201ENST00000287008 Q6ZRM9 215 aa14.99□□□□□ -0.01
PCDH1-201ENST00000287008 NUDT10Q8NFP7 164 aa14.99□□□□□ -0.01
PCDH1-201ENST00000287008 NUDT11Q96G61 164 aa14.99□□□□□ -0.01
PCDH1-201ENST00000287008 ZNF503-AS2A6NEH8 195 aa14.99□□□□□ -0.01
PCDH1-201ENST00000287008 IGKV1-6A0A0C4DH72 117 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 A0A0G2JRQ6 117 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 ADARB2-AS1A8MUL3 147 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 K7EM74 188 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 MLANAQ16655 118 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 NDUFA3O95167 84 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 Q8TAT8 98 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 NRN1Q9NPD7 142 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 LINC01549A6NIU2 74 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 NAV2Q8IVL1 2488 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 TANC1Q9C0D5 1861 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 TRBV7-9A0A0J9YWB2 115 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 SCGB1A1P11684 91 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 TEX36Q5VZQ5 186 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 ZNF524Q96C55 264 aa14.98□□□□□ -0.01
PCDH1-201ENST00000287008 ANAPC1Q9H1A4 1944 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 GBF1Q92538 1859 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 FNDC10F2Z333 226 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 DDTP30046 118 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 RIPPLY3P57055 190 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 IGFL2Q6UWQ7 119 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 FXYD7P58549 80 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 KIAA1671Q9BY89 1806 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 LOC102724200A0A096LPH7 203 aaPredicted RBP14.97□□□□□ -0.01
PCDH1-201ENST00000287008 G3V318 75 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 SERF1AO75920 110 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 ZNF876PQ49A33 203 aa14.97□□□□□ -0.01
PCDH1-201ENST00000287008 DOCK11Q5JSL3 2073 aa14.96□□□□□ -0.01
PCDH1-201ENST00000287008 LINC00614P0C842 121 aa14.96□□□□□ -0.01
PCDH1-201ENST00000287008 EVI2AP22794 236 aa14.96□□□□□ -0.01
PCDH1-201ENST00000287008 ATP5L2Q7Z4Y8 100 aa14.96□□□□□ -0.01
PCDH1-201ENST00000287008 WDR86Q86TI4 376 aa14.96□□□□□ -0.01
PCDH1-201ENST00000287008 GZMBP10144 247 aa14.96□□□□□ -0.02
PCDH1-201ENST00000287008 PSG3Q16557 428 aa14.96□□□□□ -0.02
PCDH1-201ENST00000287008 DUX4L9Q6RFH8 374 aaPredicted RBP14.96□□□□□ -0.02
PCDH1-201ENST00000287008 IGHV3-53P01767 116 aa14.95□□□□□ -0.02
PCDH1-201ENST00000287008 IGFL4Q6B9Z1 124 aa14.95□□□□□ -0.02
PCDH1-201ENST00000287008 LINC00311Q8N616 119 aa14.95□□□□□ -0.02
PCDH1-201ENST00000287008 DOPEY1Q5JWR5 2465 aa14.95□□□□□ -0.02
PCDH1-201ENST00000287008 NDUFB8O95169 186 aa14.95□□□□□ -0.02
PCDH1-201ENST00000287008 C14orf144Q96I85 54 aa14.95□□□□□ -0.02
PCDH1-201ENST00000287008 NDUFS7O75251 213 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms